Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 6e-13 >seq27 Length=921605 Score = 89.7 bits (98), Expect = 6e-13 Identities = 213/321 (66%), Gaps = 6/321 (2%) Strand=Plus/Minus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935 ||| ||||||||||| ||| |||||||| | ||| ||| | ||||||||||| | Sbjct 546265 AAAACCATCCATCTCCACCAACAGTTGATTTAAGGTAGCTTCTCTTTCATCATTCGAGCC 546206 Query 10936 ---CATACCACCCGCACTGCGTTGCT---TACCGACGGCGTCAATTTCATCGATGAAAAC 10989 |||| |||| | ||| || |||| | ||| || |||||||| | |||| Sbjct 546205 TCCCATAGCACCACCTTTGCCCCTCTCTTTACCAATGGCATCGATTTCATCTACAAAAAT 546146 Query 10990 GATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGAC 11049 |||| | || ||| | || |||||| | ||| || ||||| ||||| || Sbjct 546145 GATAGAAGGAGCCATTTTTCTTGCTTGTTCAAACAAATCACGAACTCTTGAAGCACCAAC 546086 Query 11050 ACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTC 11109 ||| ||||||||||| ||||| | | | ||| | |||||| || | ||| Sbjct 546085 ACCGACAAACATTTCAACAAATTCAGAACCAGAAACGGAAAGGAAGGGTACCCCTGCTTC 546026 Query 11110 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGC 11169 ||| || ||||| || | | ||||| || || ||||| ||| | |||| || Sbjct 546025 ACCAGCTGTGGCTTTCGCCAATAAAGTCTTACCTGTACCAGGAGGCCCAGAAAGAATTGC 545966 Query 11170 ACCACGTGGGATCCTGGCACC 11190 |||||| || ||| ||||||| Sbjct 545965 ACCACGAGGAATCTTGGCACC 545945 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 160691 CCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATC 160750 ||||| || ||| ||| | | || |||||||| || | ||||| || |||||| Sbjct 541593 CCAGTGGGGACCTATGGTAGAATTGCCCCAAGATCCGGCTTAGCTGTAAAACATGGTATT 541534 Query 160751 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 160810 ||| ||||| ||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct 541533 CAAACAGGTGCTGGTGTCGTAGACAGAGATTATACAGGCGAAGTGAAAGTTGTCTTATTC 541474 Query 160811 AATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTA 160870 ||||| | | |||||| | || || | || || ||| | || |||||||||||| Sbjct 541473 AATCATTCTAATAAAGATTTTGAGATTAATAAAGGTGACCGCGTTGCTCAACTCATCTTA 541414 Query 160871 GAGAG 160875 || || Sbjct 541413 GAAAG 541409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353256521680