Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq19 105 7e-18 seq15 91.5 1e-13 seq43 82.4 8e-11 >seq19 Length=616425 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || ||||| ||||| ||||||||||| | Sbjct 593006 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGA 593065 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| | ||| || || ||| | || | | || ||||| || || Sbjct 593066 TAAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 593125 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 593126 AATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAAC 593185 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || | |||||| || ||||||||||| || ||||||||||| || Sbjct 593186 TTCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATCTT 593236 >seq15 Length=954869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || |||||||||||||||||||| || | Sbjct 83958 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGA 83899 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 83898 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 83839 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || ||| ||| || | || ||| | || || Sbjct 83838 GATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 83779 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || ||||||||||| |||||| Sbjct 83778 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAAA 83739 >seq43 Length=816610 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||||||| | || | || | || |||||||||||||| || || || | Sbjct 809187 ACCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGA 809246 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | || || || || || || || |||| | | ||||||||| || || Sbjct 809247 CAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 809306 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| ||||| || || || | || ||| || ||||| Sbjct 809307 AATACCCTCCTTGTCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCAC 809366 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || ||||||||||| || || |||||||| Sbjct 809367 CTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414 Score = 82.4 bits (90), Expect = 8e-11 Identities = 162/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||||||| | || | || | || |||||||||||||| || || || | Sbjct 812835 ACCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGA 812894 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | || || || || || || || |||| | | ||||||||| || || Sbjct 812895 CAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812954 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || ||||| || ||| || | || || || ||||| Sbjct 812955 AATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCAC 813014 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGAT 64455 || | || | ||||| || ||||| ||||| ||||| |||||||| || |||||| Sbjct 813015 CTCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATGTTTTAAATGAT 813074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644512704240