Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq43 96.9 3e-15 seq15 87.8 2e-12 >seq43 Length=816610 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | ||| || || || | | || || |||||||| || ||||| | Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || || Sbjct 812668 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812726 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| |||| | ||| |||| || | |||||| | || ||| Sbjct 812727 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 812784 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | ||| | || ||||| |||| ||||| ||||| || ||||| Sbjct 812785 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCAT 812834 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | ||| || || || | | || || |||||||| || ||||| | Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || || Sbjct 812896 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812954 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| |||| | ||| |||| || | |||||| | || ||| Sbjct 812955 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 813012 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | ||| | || ||||| |||| ||||| || || || |||||| Sbjct 813013 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATG 813063 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | || || || || | | || || |||||||| || ||||| | Sbjct 809188 CCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 809247 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || || Sbjct 809248 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 809306 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| |||| | ||| | | || | |||||| | || |||| Sbjct 809307 AATACCCTCCTTGTC-TTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCA 809365 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || ||||| |||| |||||| ||||| || ||||| Sbjct 809366 CCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | ||| || || || | | || || |||||||| || ||||| | Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || || Sbjct 809476 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGG 809534 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| |||| | ||| |||| || |||||| | || ||| Sbjct 809535 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAGTGGTGTCCGAGGATTCC 809592 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | ||| | || || || |||| ||||| ||||| || ||||| Sbjct 809593 ACCTCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCAT 809642 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | ||| || | || | | || || |||||||| || |||| | Sbjct 812380 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 812439 Query 138448 ATAGT-ACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || || Sbjct 812440 AGAGTTATGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812498 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| |||| | ||| |||| || | |||||| | || ||| Sbjct 812499 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 812556 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | ||| | || ||||| |||| ||||| ||||| || ||||| Sbjct 812557 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCAT 812606 >seq15 Length=954869 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || |||| | || || ||||||||||||||||| | Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||| | | |||||| | |||||||| || || Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| | || | || |||| || | ||||| | || || | Sbjct 83837 ATACCTTCTTTGTC-TTGAATCTTAGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 83780 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| |||||| || ||| Sbjct 83779 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAAA 83739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262114649120