Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq43 96.9 3e-15
seq15 87.8 2e-12
>seq43
Length=816610
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | ||| || || || | | || || |||||||| || ||||| |
Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || ||
Sbjct 812668 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812726
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| |||| | ||| |||| || | |||||| | || |||
Sbjct 812727 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 812784
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | ||| | || ||||| |||| ||||| ||||| || |||||
Sbjct 812785 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCAT 812834
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | ||| || || || | | || || |||||||| || ||||| |
Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || ||
Sbjct 812896 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812954
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| |||| | ||| |||| || | |||||| | || |||
Sbjct 812955 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 813012
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| | ||| | || ||||| |||| ||||| || || || ||||||
Sbjct 813013 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATG 813063
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | || || || || | | || || |||||||| || ||||| |
Sbjct 809188 CCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 809247
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || ||
Sbjct 809248 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 809306
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| |||| | ||| | | || | |||||| | || ||||
Sbjct 809307 AATACCCTCCTTGTC-TTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCA 809365
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || ||||| |||| |||||| ||||| || |||||
Sbjct 809366 CCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | ||| || || || | | || || |||||||| || ||||| |
Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || ||
Sbjct 809476 AGAGTTCTGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGG 809534
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| |||| | ||| |||| || |||||| | || |||
Sbjct 809535 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAGTGGTGTCCGAGGATTCC 809592
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | ||| | || || || |||| ||||| ||||| || |||||
Sbjct 809593 ACCTCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCAT 809642
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | ||| || | || | | || || |||||||| || |||| |
Sbjct 812380 CCACCACGCAATCTCAAGACCACGTGCAGTGTGGATTCTTTTTGAATATTAGAGTCAGAC 812439
Query 138448 ATAGT-ACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| ||||||||||| | | || | | ||| ||||| || ||
Sbjct 812440 AGAGTTATGCCA-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812498
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| |||| | ||| |||| || | |||||| | || |||
Sbjct 812499 AATACCCTCCTTGTC-CTGAATTTTAGATTTGACATTG-TCAATGGTGTCCGAGGATTCC 812556
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | ||| | || ||||| |||| ||||| ||||| || |||||
Sbjct 812557 ACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCAT 812606
>seq15
Length=954869
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || |||| | || || ||||||||||||||||| |
Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || | ||| ||||| | | |||||| | |||||||| || ||
Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | || |||| || | ||||| | || || |
Sbjct 83837 ATACCTTCTTTGTC-TTGAATCTTAGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 83780
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| || |||
Sbjct 83779 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAAA 83739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262114649120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |