Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq27 214 2e-50 >seq27 Length=921605 Score = 214 bits (236), Expect = 2e-50 Identities = 875/1369 (64%), Gaps = 29/1369 (2%) Strand=Plus/Minus Query 111642 GGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCCGT-GG 111700 ||||||||||| |||||| | || ||| | || || ||| || |||||| | || Sbjct 395847 GGTATCCATGGTACAGATATCAAGTCCGTTATAGAAACTTACAACTTGATGTCTCTAAGG 395788 Query 111701 TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTC 111760 ||| |||||||| ||| | ||||| | |||||||||||||| || || |||||||| Sbjct 395787 TAT-TTCATCCATGCATCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTC 395729 Query 111761 CAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCAC 111820 |||||| | | || | ||||| ||||| || | || ||||| | || | | Sbjct 395728 TTCATGTTTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAA 395669 Query 111821 TGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAG 111880 |||||||| || || || ||||||||||| ||| | || |||||| | | | Sbjct 395668 GGAATGTGCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCG 395609 Query 111881 AGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 | | | || ||| |||||| |||||| || | ||| | || || ||| | Sbjct 395608 TTCTACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGAT 395549 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGAT 111996 ||| || |||||| || || || ||||| |||||| | || | ||| || Sbjct 395548 TCGAGTCTTTAACAATACTGCTCGTTATGTCGACCAAGGT-GGTAACAAAAGACCAGGCG 395490 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 || | || | || ||||| |||||||| || || || | || ||| |||| | | Sbjct 395489 CTTTTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAA 395430 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCA 112115 || || ||| | || || | ||||| | ||| | || | || || |||||||| Sbjct 395429 AAAATCACGGTAAGGAAGAAATTC-GTGCCAGAGATTTATTTCCAGCACTTTGGATTCCT 395371 Query 112116 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 112175 ||| | |||||||| | || | || | || | ||| | | |||| |||| | Sbjct 395370 GATTTATTCATGAAACGTGTCCAAGAAAACGGTGAGTGGACCTTGTTTTCTCCAAGTGAA 395311 Query 112176 GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235 || || ||| | | |||| | || ||||| |||| | ||| | |||| Sbjct 395310 GCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAACGTTACGTT 395251 Query 112236 GAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 | ||| |||| | | || | ||| | ||||| | || || | || Sbjct 395250 GCAGAGGGTCGCGGTAGAAAAACCATTAAAGCCCAGAAATTGTGGTACGCCATCTTGGAG 395191 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 ||||||| || |||||||| |||| ||||| || || || || |||||| |||||| Sbjct 395190 GCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATGCTTGTAACACGAAGAGT 395131 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 || || |||||||| ||| ||||| ||| ||| | ||| ||||| | |||| Sbjct 395130 AACCAGAAGAATTTAGGTACTATCAAATCTTCTAACTTATGTTGTGAAATTGTAGAATAC 395071 Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTAT- 112472 | | ||||||||| ||||| ||||| || || || || || | || | |||| Sbjct 395070 TCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTGCGTTGCCATCCTGTATT 395011 Query 112473 ------GTGGATCCAGAGACAAAGAC------ATTTGATTATGAAAAACTCCACGAAGTT 112520 | ||| ||| ||||| | | | | || | || |||||| || Sbjct 395010 CAAACAGCGGA---AGATGGTAAGACCCAATGGTATAACTTTGCTAGGCTACACGAAATT 394954 Query 112521 ACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG 112580 | || | | || || |||||| ||| ||||| | || | ||| || ||| Sbjct 394953 GCTAAGGTTATTACTCGTAATTTAAACAAAGTCATTGACCGTAACTATTATCCAGTTATT 394894 Query 112581 ACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCG 112640 ||| || ||||| ||||| ||| | || || | ||| ||||| | ||| | || Sbjct 394893 GAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGTGTTAATGGTTTGGCT 394834 Query 112641 GATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 112700 ||| |||||| | | || |||| || || | || || ||| | | ||| Sbjct 394833 GATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGCCAAGAACTTGAATATT 394774 Query 112701 CGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTT 112760 | || ||||| || || ||||||||||| | || | | || ||||| | Sbjct 394773 CAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGTGAATTGGCTCAAAAA 394714 Query 112761 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 112820 ||||||||||||||||||| ||| |||||||||| ||| ||||| || | |||| |||| Sbjct 394713 GATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGTGTTTTGCAATATGAT 394654 Query 112821 ATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAA 112879 |||| |||| | |||| | | || || |||||| || | || | || || Sbjct 394653 ATGT-GGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTTGAAACAGAAAATTAA 394595 Query 112880 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 112939 ||| | ||| | | || ||| | |||||||||||||||| || || || | || Sbjct 394594 GGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAACATCTCA 394535 Query 112940 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 ||| || || |||||||||| || || || | ||| ||||||| ||| Sbjct 394534 AATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTAT 394486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742043073120