Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq29 127 2e-24 >seq29 Length=1538644 Score = 127 bits (140), Expect = 2e-24 Identities = 487/757 (64%), Gaps = 16/757 (2%) Strand=Plus/Minus Query 154356 GAAGTATTCAATAAGTATCATAGTGAAACTGACATGATGAGATATATCTACGAGTTATGC 154415 ||| | ||| ||||| | || ||||| |||| ||| |||||||| | | ||| Sbjct 242376 GAAATTTTCCATAAGCACCACAGTGAGACTGCTATGTTGAGATATTTGCATCGTTTACAA 242317 Query 154416 TCTAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAG-TTGCACAATGAAATT 154474 ||| ||||| || || | ||| ||| |||| ||||| | ||| ||||||||| | Sbjct 242316 TCTCGTGATTTGTCGTTGGCCAATTCCATGATTCC-CTTGGGATCTTGTACAATGAAACT 242258 Query 154475 AAATGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACA 154534 |||| ||| ||| | ||||| | ||||| | ||||| ||| |||| || Sbjct 242257 AAATAGTACAGTTGAAATGATGCCAATTACATGGCCGCAATTTGCAAACATGCACCCGTT 242198 Query 154535 TACACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTT 154594 ||| ||| || || || | |||| | | || | ||||| | | Sbjct 242197 CCAACCATTGAACCAAGTAGAAGGCTACAAAGAAATACTCG--GATCTTTAGAAAGAGAT 242140 Query 154595 ATGTG--ATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGT 154652 |||| ||||||| || || ||| | | || || ||||| ||| | || |||| ||| Sbjct 242139 TTGTGCAATATCACTGGTTTCGATGGTGTTTCGTTGCAACCAAACTCTGGTGCACAAGGT 242080 Query 154653 GAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCA-AGGATCAGGAGATGATAAAAG 154711 || || | ||| | || ||| | |||| | | || ||| || || | | Sbjct 242079 GAATACACTGGATTAAGAGTCATCAGATCATATCTGGACAGTATC-GGTGAAACCCATCG 242021 Query 154712 AAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGC 154771 ||||||||||| || || | || || ||||| || || || ||| |||| |||| Sbjct 242020 TAATGTATGTTTAATTCCCGTTTCTGCTCATGGTACCAACCCCGCTTCAGCTGCCATGTG 241961 Query 154772 AGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCT 154831 || ||||||||||| || | ||| |||||| |||| | |||||||| Sbjct 241960 TGGTATGAAAGTTGTCCCGGTTCACTGTTTACCTGATGGATCGCTAGATTTAAAAGATCT 241901 Query 154832 AGAGAAGAAAGC----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 | || ||||| || ||| || | || | ||| || ||||| ||||| | Sbjct 241900 AAAGTTGAAAGTTGGAAAACATAAAGATGATTTAGCTGCGGTG----ATGATAACATATC 241845 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || ||||| |||||||| | || | | || | | | || ||| | Sbjct 241844 CCTCCACTTATGGTTTATTTGAACCAGGTGTTCAAGATGCATTTGATTTGGTCCATCAAC 241785 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 ||||||| || || ||| | ||||| || ||| | |||||||| || || || | || Sbjct 241784 ATGGTGGCCAAGTTTATTTAGATGGTGCTAATATGAATGCACAAGTTGGTTTAACGTCAC 241725 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 || |||| | |||||||| || || ||||| ||||| ||||| ||||| | |||||||| Sbjct 241724 CAGGTGATTTAGGTGCAGACGTTTGCCATCTGAACTTGCATAAGACATTTTCTATTCCAC 241665 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||| || || || || | | || ||||| |||| Sbjct 241664 ATGGTGGAGGTGGACCAGCAGGAGCACCTATTTGTGT 241628 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||||| |||||| |||| ||||||||||| ||||| ||||||||||| ||||| | Sbjct 243000 CAAAGATTTGGTGTTCCAATGGGATATGGTGGTCCACATGCTGCATTTTTTGCTGTGATT 242941 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 ||||| | || ||||| || || ||||||||||| ||| || ||| || |||| Sbjct 242940 GACAAATTAAATAGAAAAATTCCGGGCAGAATTGTTGGTGTATCGAAAGACCGTTTAGGT 242881 Query 153888 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGC 153946 || | | ||| | ||||| ||||| |||||||| || ||||||| | ||||| || Sbjct 242880 AAACCCGCCCTAC-GTTTAGCGCTACAAACTAGAGAACAACATATCAAACGTGACAAGGC 242822 Query 153947 AACCAGTAACATCTGCACAGCTCAGGC 153973 || || || ||||| ||||| || Sbjct 242821 TACATCCAATATTTGCACTGCTCAAGC 242795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212466952640