Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq29 154 2e-32 >seq29 Length=1538644 Score = 154 bits (170), Expect = 2e-32 Identities = 486/742 (65%), Gaps = 22/742 (3%) Strand=Plus/Minus Query 159049 CATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAAGATTTCTCATTA 159108 || |||||||||| ||| |||||||| | || ||| ||| ||||| || || Sbjct 242358 CACAGTGAGACTGCTATGTTGAGATATTTGCATCGTTTACAATCTCGTGATTTGTCGTTG 242299 Query 159109 GTAAATGGTATGGTTCCACTTGGTAG-TTGTACTATGAAACTAAACGCAGCATCAGAACT 159167 | ||| ||| |||| ||||| | |||||| ||||||||||| || ||| | Sbjct 242298 GCCAATTCCATGATTCC-CTTGGGATCTTGTACAATGAAACTAAATAGTACAGTTGAAAT 242240 Query 159168 GATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTATGATACAGAC 159227 |||||| | ||||| | ||||| ||| |||| || ||| ||| || Sbjct 242239 GATGCCAATTACATGGCCGCAATTTGCAAACATGCACCCGTTCCAACCATTGAACCAAGT 242180 Query 159228 CATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATGTG--ATATCACAGGG 159285 || || || |||| | | || | ||||| | | |||| ||||||| || Sbjct 242179 AGAAGGCTACAAAGAAATACTCG--GATCTTTAGAAAGAGATTTGTGCAATATCACTGGT 242122 Query 159286 TTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTA 159345 || ||| | | || || ||||| ||| | || |||| ||||| || | ||| | | Sbjct 242121 TTCGATGGTGTTTCGTTGCAACCAAACTCTGGTGCACAAGGTGAATACACTGGATTAAGA 242062 Query 159346 GCAATCCAAGCATACCATCA-AGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACC 159404 | ||| | |||| | | || ||| || || | | ||||||||||| || || Sbjct 242061 GTCATCAGATCATATCTGGACAGTATC-GGTGAAACCCATCGTAATGTATGTTTAATTCC 242003 Query 159405 AGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGG 159464 | || || ||||| || || || || ||||| | ||| || ||||||||||| Sbjct 242002 CGTTTCTGCTCATGGTACCAACCCCGCTTCAGCTGCCATGTGTGGTATGAAAGTTGTCCC 241943 Query 159465 TGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGC----AA 159520 || | ||| |||||| |||| | ||||||||| || ||||| || Sbjct 241942 GGTTCACTGTTTACCTGATGGATCGCTAGATTTAAAAGATCTAAAGTTGAAAGTTGGAAA 241883 Query 159521 TCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTAT 159580 ||| || | || | ||| || ||||| |||||||| || || ||||| ||| Sbjct 241882 ACATAAAGATGATTTAGCTGCGGTG----ATGATAACATATCCCTCCACTTATGGTTTAT 241827 Query 159581 TTGAAACAAACAT-CAGACAGATATGTAAGATT--GTTCATGAGAATGGTGGTCAGGTAT 159637 ||||| || | || |||| | |||| || ||| | ||||||| || || | Sbjct 241826 TTGAACCAGGTGTTCA---AGATGCATTTGATTTGGTCCATCAACATGGTGGCCAAGTTT 241770 Query 159638 ATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTG 159697 || | |||||||| ||| | |||||||| || ||| || | |||| |||| | |||| Sbjct 241769 ATTTAGATGGTGCTAATATGAATGCACAAGTTGGTTTAACGTCACCAGGTGATTTAGGTG 241710 Query 159698 CAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTC 159757 |||| || || ||||| ||||| ||||||||||| | |||||||||||| || || || | Sbjct 241709 CAGACGTTTGCCATCTGAACTTGCATAAGACATTTTCTATTCCACATGGTGGAGGTGGAC 241650 Query 159758 CTGGCGTAGGTCCTATTGGTGT 159779 | | | || |||||| |||| Sbjct 241649 CAGCAGGAGCACCTATTTGTGT 241628 Score = 109 bits (120), Expect = 6e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||| |||||| |||| |||||||| || ||||| ||||||||||| ||||| | Sbjct 243000 CAAAGATTTGGTGTTCCAATGGGATATGGTGGTCCACATGCTGCATTTTTTGCTGTGATT 242941 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 ||||| | || ||||| || || ||||||||||| ||| || ||| | |||| Sbjct 242940 GACAAATTAAATAGAAAAATTCCGGGCAGAATTGTTGGTGTATCGAAAGACCGTTTAGGT 242881 Query 158563 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621 || | | ||| | ||||| ||||| |||||||| || ||||||| | | ||||| || Sbjct 242880 AAACCCGCCCTAC-GTTTAGCGCTACAAACTAGAGAACAACATATCAAACGTGACAAGGC 242822 Query 158622 AACCAGTAACATCTGCACAGCACAAGC 158648 || || || ||||| || ||||| Sbjct 242821 TACATCCAATATTTGCACTGCTCAAGC 242795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050861870560