Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq43 300 1e-75 seq41 232 5e-55 seq19 95.1 1e-13 >seq43 Length=816610 Score = 300 bits (332), Expect = 1e-75 Identities = 584/847 (69%), Gaps = 24/847 (3%) Strand=Plus/Plus Query 551749 TATCTCTCGAAGATGGTCTCTTTTCTGTATTA--GCTACTAGTGGAGATTCTCATCTTGG 551806 ||||| |||| || ||| | |||| ||| |||||| || ||| ||||| | || Sbjct 484302 TATCTATCGATGAAGGTAT--TTTCGAAGTTAAGGCTACTGCAGGTGATACTCATTTAGG 484359 Query 551807 TGGCGAAGATTTTGATAATAGACTGGTA--TCATGGTGTGTTGAAGATTTTAAACGAAAA 551864 ||| |||||||| ||||||||| |||| |||| || | | | || || || |||| Sbjct 484360 TGGTGAAGATTTCGATAATAGATTGGTCACTCATC-TG-GCTAATGAATTCAAGAGAAAG 484417 Query 551865 AACAAAGTTGATCTATCTACATCTGC-CAAAGCTCTTC--GTCGTCTAAGAACTGCTTGC 551921 || || ||| || ||||| ||||| || | | | ||||||| || Sbjct 484418 AATAAGAAGGATTTA---ACATCGAATCAAAGATCGTTAAGAAGATTAAGAACCGCCGCT 484474 Query 551922 GAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTA 551981 |||||||| || |||| | || || | | || || || | ||| |||| || || Sbjct 484475 GAAAGAGCTAAGAGAGCATTGTCCTCGTCTTCACAGACATCTGTCGAAATAGACTCCTTG 484534 Query 551982 TTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCT 552041 | ||| || ||||||| | |||| | || | || || | ||||||||| | ||| || Sbjct 484535 TATGAAGGTATTGATTTTTATACCTCGATAACAAGAGCTAGATTTGAAGAGTTATGTGCT 484594 Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGAT 552101 || | || ||| || | |||||||| ||| | |||||||||||| | || | ||| Sbjct 484595 GACATGTTCAGATCGACTTTAGAACCAGTGGAAAAGGTTTTAAGAGATGCCAAATTGGAT 484654 Query 552102 AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 ||||| || || |||||||||| ||||||||||| ||||| |||||||| || |||| Sbjct 484655 AAATCTCAACTAGATGAAATTGTCCTTGTTGGTGGTTCTACTAGAATTCCAAAGATTC-- 484712 Query 552162 GAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGTGTTAATCCAGAT 552218 ||| ||| |||| ||||| || ||||| || |||| | | |||| |||||| Sbjct 484713 -AAAAATTAGTTTCTGATTTCTTTAACGGTAAGGAACCAAATAAGTCTATTAACCCAGAT 484771 Query 552219 GAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC-TGATGA 552277 || ||||| || |||||||| || ||||||| || ||| | | || | || | | | Sbjct 484772 GAAGCTGTCGCTTATGGTGCTGCTGTTCAAGCTGCCATTTTAACCGGTGATACATCTTCA 484831 Query 552278 AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGT 552337 || ||| ||| || | || | ||||||| |||| | || | ||| | ||||| | Sbjct 484832 AAGACT-CAAGATTTATTATTGTTAGATGTGGCTCCCTTGTCATTGGGTATTGAAACCGC 484890 Query 552338 TGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCG 552397 || ||||| ||||| || | || ||||||| |||| ||||| || ||||| || Sbjct 484891 AGGTGGTATCATGACCAAATTAATTCCTAGAAATTCTACAATTCCAACAAAGAAATC-CG 484949 Query 552398 TGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 | ||| || || || | ||||| ||| | | ||| |||||| | || ||||| | Sbjct 484950 AGACTTTCTCAACTTACGCTGATAACCAACCAGGTGTGCTGATTCAAGTATTCGAAGGTG 485009 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTC 552516 |||||| | || |||||||| ||| | | |||| ||| | || | ||| ||||| | Sbjct 485010 AAAGAACAAAGACAAAAGATAACAATTTATTGGGTAAGTTTGAATTGGCAGGAATTCCAC 485069 Query 552517 CTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTT 552576 | ||||| | || || || ||| |||| || || || ||||| ||||| ||||| |||| Sbjct 485070 CAGCTCCAAGAGGTGTCCCACAAGTTGAGGTCACCTTTGATATTGATGCTAATGGTATTT 485129 Query 552577 TGAATGT 552583 ||||||| Sbjct 485130 TGAATGT 485136 Score = 223 bits (246), Expect = 3e-52 Identities = 395/568 (70%), Gaps = 20/568 (4%) Strand=Plus/Plus Query 549976 AATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG- 550034 ||||||||| |||| | ||||| |||||||| || |||||| ||||||| | Sbjct 483679 AATGTCAAA------AGCTGTCGGTATTGATTTAGGTACTACATATTCGTGTGTTGCTCA 483732 Query 550035 TTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCAT 550094 ||| || || || | || || |||||||| |||||||||||||||||||| || |||| Sbjct 483733 TTTTGCCAA-TGATCGTGTAGAGATTATTGCAAATGATCAAGGTAACAGAACCACACCAT 483791 Query 550095 CTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCA 550154 | ||||| | || || || ||||| ||| ||||||| || || || ||||||| Sbjct 483792 CATATGTGGCGTTTACAGACACTGAGAGATTAATTGGTGACGCTGCTAAGAATCAAGCTG 483851 Query 550155 CTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATG 550214 | |||||| || ||| ||||||||||||| ||||| ||||| | | ||| ||| Sbjct 483852 CCATTAATCCACAAAACACTGTTTTTGATGCTAAGCGTTTGATTGGTCGTCGGTTTGATG 483911 Query 550215 ATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAA 550274 || || ||| | ||| || |||| || || | |||||||| || | Sbjct 483912 ATGCGGAAGTTACGAATGATGCTAAACATTTCCCATTTAAGATTGTTAACAAGGAAGGTA 483971 Query 550275 AACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAAC---AATTTTCA--CCAGAACA 550329 ||||| ||| ||| | | || | || |||| | |||||| || ||| | Sbjct 483972 AACCTGCCATTCAAG-TGGAGTTCAAAG----GTGAAACCAAAGTTTTCACTCCGGAAGA 484026 Query 550330 AATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAG 550388 ||| || ||||||||||| || || |||||| | || || || | || | | ||| Sbjct 484027 AATCTCCTCTATGGTTTTGATCAAGATGAAAGAGACCGCTGAGGGGTTCT-TGGGTACTA 484085 Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| ||||| || | || || || |||||||| || || || ||| | ||||| | Sbjct 484086 CTGTTAATGATGCTGTTGTTACAGTTCCTGCATATTTCAACGATTCTCAAAGACAAGCCA 484145 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 |||| |||||||| |||||||| | ||||| | |||||||| |||||||| |||| Sbjct 484146 CTAAGGATGCTGGTACAATTGCTGGTTTAAATGTCTTGCGTATTATTAATGAACCAACTG 484205 Query 550509 CTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| |||| ||||| | ||||| Sbjct 484206 CTGCTGCCATTGCTTATGGTTTGGATAA 484233 Score = 197 bits (218), Expect = 1e-44 Identities = 371/536 (69%), Gaps = 22/536 (4%) Strand=Plus/Plus Query 368583 TGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGA 368642 ||||||| |||||| |||| || | ||||||||| |||||||| ||||| ||| || Sbjct 487354 TGATTGGAATATTTCCAGAAACAGATATTGGGGAACACCAATTCCTTTATGGGTATCCGA 487413 Query 368643 TGATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGT 368702 ||| | ||||| ||||| ||||||| |||||||||| |||||||| ||| || Sbjct 487414 AGATTTAAAGGAAATCGTTTGCGTAGGTTCCGTTAAAGAATTAGAAGAATTAAGTGGAGT 487473 Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762 || |||| ||||||||| ||| || || | |||| |||||||| ||| | Sbjct 487474 TGAAGGTATTGTCGATTTACATCGTGAGTTTATCGACAAAATTACTATTCCATCGAAGCA 487533 Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822 ||| |||||| |||| || |||||| |||||| ||||| ||||||||||| ||||| Sbjct 487534 AGGTAAAGGTGAATTGAAAAGAATTGAAGAAGTTTTCGATTGTTGGTTTGAATCTGGTTC 487593 Query 368823 TATG-CCTTATGGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATA 368881 ||| |||| || | ||||||||||||||| ||| | || | ||| | | Sbjct 487594 CATGCCCTTCGCCTCTCA-ACATTATCCATTTGAAAACTCTGAAAATTTT-----TCGCA 487647 Query 368882 AAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATA 368941 ||| | | ||| | ||| | | || | | ||||||||| | ||||||||||| | Sbjct 487648 AAGGGT-TCCTGCTAACTTTATCTCTGAGGGATTAGATCAAACAAGAGGTTGGTTTTACA 487706 Query 368942 CCCTATTAGTATTA--TCCACAGCTATTTTCGATAAACCGG---CTTTTAAAAATGTAAT 368996 | || || ||| | | || || ||| || | || | | || ||||| || Sbjct 487707 CTTTAAGTGTTTTAGGTACTCATCT-GTTTGGAGA----GGTTCCATACAAGAATGTCAT 487761 Query 368997 AGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAA--AGTAAGGGTAAT 369054 || | |||||| || || | |||||| ||| ||||||||| ||| | || Sbjct 487762 TGTTTCAGGTATTATTCTAGCTGCAGATGGTAGAAAAATGTCAAAATCTCTAAAG--AAC 487819 Query 369055 TATTCCGATCCTAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATA 369110 ||| | ||||| |||||| | | ||||||| |||||||||| | || |||||||| Sbjct 487820 TATCCGGATCCGAATATTGTCTTGGATAAATATGGTGCTGATGCATTAAGATTATA 487875 Score = 109 bits (120), Expect = 4e-18 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| |||||| || |||| |||||||| ||| || |||||||| || || || Sbjct 809223 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 809282 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | ||| ||||| || || ||||| || || || ||||||||||| ||| || Sbjct 809283 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATTTTAGATTTGACGTT 809342 Query 563403 CTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || |||| | || | || || || || | ||| ||||| || | |||||| | Sbjct 809343 ATCAATGGTGTCAGAG-GATTCCACCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGA 809401 Query 563462 CGAAAATTTGCATA 563475 | || ||||||||| Sbjct 809402 CAAAGATTTGCATA 809415 Score = 102 bits (112), Expect = 7e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 |||||||| || | ||||| ||| | ||||| | || ||| | | || | | || Sbjct 264891 GATGTTACCCCATTGTCTCTAGGTATTGAAACTTTGGGTGGTGTCTTTACCAGATTAATT 264832 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 ||||||||||||||||| || ||||||| | |||||||| | | | | Sbjct 264831 CCAAGAAATACTACTATTCCAACCAAGAAATCTCAAATCTTTTCTACTGCCGCTGCTGGT 264772 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 ||||| |||| ||| | |||| |||| |||||| |||| || ||| || || Sbjct 264771 CAAACCTCTGTGGAAATCAGAGTTTTCCAAGGTGAAAGAGAATTGGTTAGAGACAACAAA 264712 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 |||||| ||| | | || |||||||| || ||||| || || || ||||| Sbjct 264711 TTGATTGGTAATTTCACTCTATCTGGTATTCCACCAGCTCCAAAAGGTGTCCCACAAATC 264652 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCT 552602 |||||||| |||||| | || || |||||||| | || || ||||| | || || || Sbjct 264651 GAAGTTACCTTCGATCTAGACGCAGATGGAATTATCAACGTCTCTGCTAGAGACAAGGCT 264592 Query 552603 AGCAACAAG 552611 ||||||| Sbjct 264591 TCCAACAAG 264583 Score = 102 bits (112), Expect = 7e-16 Identities = 315/483 (65%), Gaps = 6/483 (1%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGGTACAATGCATTATGGTCATATTTTAGTATCATCTATT 367326 ||||| ||||||||||| || ||||| ||||| |||||||| |||| ||| | || Sbjct 486122 GATGGTCCTCCATTTGCAACTGGTACTCCTCATTACGGTCATATCTTAGCATCTACCGTT 486181 Query 367327 AAAGACACCATAATTAGATATTTTACCATGAAGGGTTACAAAGTTGATAGAAGAAATTCT 367386 ||||| | | | ||||||| ||||||| || | | ||||| |||||| ||| Sbjct 486182 AAAGATATCGTGCCTAGATATGCCACCATGACTGGGCATCATGTTGAAAGAAGA--TTCG 486239 Query 367387 --TGGGATTGTCATGGAGTTCCAATTGAA-ATGTTAGCTAAAAAAGTAATCGGATACACA 367443 |||||| |||||| | ||||||||| || | | | | || | | | || ||| Sbjct 486240 GCTGGGATACTCATGGTTTACCAATTGAACATATCATCGACAAG-GAACTAGGTATCACT 486298 Query 367444 ACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTCGTAATTTG 367503 || |||| | | | ||||| || | ||| | || ||| ||| | | Sbjct 486299 TGTAAAGAAGATGTCTTCAAGTATGGTCTTGACAATTACAACAATAAATGTAGATCCATC 486358 Query 367504 GTTTTAAAATGTGCTGATCGCTGGTATCAAGATTTTGAACGTATTGGAAGATGGATTGAC 367563 || | | | |||| | ||| || | ||| ||| | || | ||||| || Sbjct 486359 GTCATGACTTATGCTAGTGAATGGAGAAAAACTATTGGTCGTTTAGGTCGTTGGATAGAT 486418 Query 367564 GTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGGGCATTT 367623 | | ||||| || || || ||| || | | |||||||||||||| ||||| || Sbjct 486419 TTTGACAATGATTACAAGACGATGTATCCAAGTTTCATGGAATCTGAATGGTGGGCTTTC 486478 Query 367624 AAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATATTCAACT 367683 || ||| | || ||| | | | ||| | |||| |||||| ||||| ||||| || Sbjct 486479 AAGCAACTTTATGAAAAGGATCAGGTTTATCGTGGTTTTAAAGTTATGCCTTATTCCACC 486538 Query 367684 GGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGTAGTTGAT 367743 ||||||| ||| || | ||||||||||| ||||||| ||| ||| || |||| Sbjct 486539 GGTTGTACGACTCCTCTAAGTAATTTTGAAGCCCAACAAAACTATAAAGATGTCAATGAT 486598 Query 367744 CCA 367746 ||| Sbjct 486599 CCA 486601 Score = 102 bits (112), Expect = 7e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| |||||| || |||| |||||||| ||| || |||||||| || || || Sbjct 812871 TTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAA 812930 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | ||| ||||| || || ||||| || || || || |||||||| ||| || Sbjct 812931 AATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATTTTAGATTTGACATT 812990 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | | || | || || | |||| ||| ||||| || | ||||||| Sbjct 812991 GTCAATGGTGTCCGAG-GATTCCACCTCCAACGTAATAGTCTTACCTGTCAACGTTTTAA 813049 Query 563462 CGAAAATTTGCAT 563474 |||| |||||||| Sbjct 813050 CGAAGATTTGCAT 813062 >seq41 Length=1599359 Score = 232 bits (256), Expect = 5e-55 Identities = 391/564 (69%), Gaps = 14/564 (2%) Strand=Plus/Minus Query 549968 TAAGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGT 550027 ||| |||||||||| || || | ||||| ||||| || || || || ||| Sbjct 1518171 TAAAATATAATGTCTAAG------GCCGTTGGTATCGATTTGGGTACTACGTACTCATGT 1518118 Query 550028 GTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACT 550087 |||| | | ||||| | ||||||||||| || || ||||||||||||||||| Sbjct 1518117 GTTGCTCACTTTTCAAATGATCGTGTTGAAATTATCGCTAACGATCAAGGTAACAGAACC 1518058 Query 550088 ACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATAT 550147 |||||||||| ||| |||| || || || ||| || |||||||||| || || | Sbjct 1518057 ACTCCATCTTTTGTCGCTTTTACCGACACCGAAAGATTGATTGGTGATGCTGCTAAGAAC 1517998 Query 550148 CAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGT 550207 ||||| || || || || || || ||||||| ||||| ||||| ||||| |||| Sbjct 1517997 CAAGCTGCTATGAACCCAACTAACACCGTTTTTGACGCTAAGCGTTTGATTGGTAGAAAC 1517938 Query 550208 TTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTT 550267 || | ||| | ||||| | || |||||||||| || ||| | || || ||||| Sbjct 1517937 TTCAGTGACCCTGAAGTTCAAGGTGACATGAAGCATTTCCCATTCAAGATCGTCGATGTT 1517878 Query 550268 TCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAAC----AATTTTCACC 550323 || || || | ||||||| | || |||| | |||| ||||| | || Sbjct 1517877 GAAGGTAAGCCACAAATTGAAGTTGAATAT-AAGGGT---GAAAACAAGAAATTTACTCC 1517822 Query 550324 AGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG 550383 |||||||| || ||||||||||| || ||||| |||| || ||| | || Sbjct 1517821 TGAACAAATCTCTTCTATGGTTTTGGGTAAGATGAAGGAAACTGCTGAATCTTACTTAGG 1517762 Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 | |||||| ||||| || | ||||| ||||| ||||| || || || ||| | || Sbjct 1517761 TTGTAAAGTTAACGATGCTGTCGTTACTGTTCCAGCTTATTTCAACGATTCTCAAAGACA 1517702 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||| || | || |||||||| | || ||| | ||||| ||||||||||| Sbjct 1517701 AGCTACTAAGGACTCCGGTACAATTGCTGGTTTGAACGTTTTGCGTATCATCAATGAACC 1517642 Query 550504 TACTGCTGCTGCACTTGCATATGG 550527 |||||||||||| |||| ||||| Sbjct 1517641 TACTGCTGCTGCCATTGCTTATGG 1517618 Score = 221 bits (244), Expect = 1e-51 Identities = 572/855 (67%), Gaps = 44/855 (5%) Strand=Plus/Minus Query 551757 GAAGATGGTCTCTTTTCTGTATTA--GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814 ||||||||| | |||| ||| ||||| ||| || ||||| | ||||| |||| Sbjct 1517535 GAAGATGGTAT--TTTCGAAGTTAAGGCTACCGCTGGTGACACTCATTTAGGTGGTGAAG 1517478 Query 551815 ATTTTGATAATAGACTGGTA--TCATGGTGTGTTGAAGATTTTAAACGAAAAAACAA--- 551869 |||| || || ||| |||| |||| || | | | || || || ||||||| || Sbjct 1517477 ATTTCGACAACAGATTGGTCACTCATT-TG-GCTAACGAATTCAAGAGAAAAAATAAGAA 1517420 Query 551870 --AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAA 551925 | |||| || ||| |||||| ||| | | ||||||||||||| |||| Sbjct 1517419 GGACTTGACCT--CTAA-----CCAAAGAGCTTTGAGAAGATTAAGAACTGCTTGTGAAA 1517367 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 |||| || || || | || ||| ||||||| || ||||| | || || ||| | Sbjct 1517366 GAGCTAAGAGAACTTTATCCTCTTCCGCTCAAACTTCTGTTGAAATTGACTCCCTATACG 1517307 Query 551986 AGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATC 552045 | || || |||| | || | || | || |||| ||| ||||| | ||| ||||| Sbjct 1517306 AAGGTATCGATTTCTACACTACCATCACAAGAGCCAGATTCGAAGAATTATGTGCTGATT 1517247 Query 552046 TCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAAT 552105 | || ||| || | || || || ||| | || || |||||| | ||| | || |||| Sbjct 1517246 TGTTCAGATCTACTCTAGATCCTGTTGAAAAGGTCTTGAGAGATGCTAAGTTGGACAAAT 1517187 Query 552106 CCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA 552165 | || ||||||||||| | |||||||| ||||| |||||||| || ||| ||| Sbjct 1517186 CTTCTGTTCATGAAATTGTTTTGGTTGGTGGTTCTACCAGAATTCCAAAGGTTC---AAA 1517130 Query 552166 TGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGG 552222 ||| | | || ||||| ||||| || ||| | |||| |||||||| | Sbjct 1517129 AATTAGTTACCGATTTCTTCAACGGTAAGGAACCAAACAGATCCATTAACCCAGATGAAG 1517070 Query 552223 CTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAACTGATGAAAA 552280 ||||||| || |||||||| ||||||| || || | ||| ||| || | | || Sbjct 1517069 CTGTTGCATACGGTGCCGCCGTTCAAGCTGCCATCTTGACTGGTGACCAA-TCTTCCAAG 1517011 Query 552281 ACTACAAAATATTGTACTT-GTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTG 552339 ||| ||| || |||| || | |||||| |||| ||||| | ||| | ||||| | || Sbjct 1517010 ACT-CAAGAT-TTGTTGTTATTGGATGTTGCTCCATTATCTTTGGGTATTGAAACCGCTG 1516953 Query 552340 GAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTG 552399 | ||| |||||||||| | || ||||| | |||||||| ||||| ||| Sbjct 1516952 GTGGTGTTATGACTAAGTTGATTCCAAGAAACTCAACTATTCCAACCAAAAAGTCTGAAA 1516893 Query 552400 TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAA 552459 || || || || | ||||| ||| | | ||| |||||| | |||||||| |||| Sbjct 1516892 CTTTCTCAACCTACGCTGATAACCAACCAGGTGTCTTGATTCAAGTCTTTGAAGGTGAAA 1516833 Query 552460 GAAAATTCACTAAAGATAATAATCAACTTGGT-----ACTTTTAATTTAGAAGGTATTCC 552514 || || || || || ||||||| | | || |||| || |||||||| Sbjct 1516832 GAGCTAGAACGAAGGACAA----CAACTTGTTGGGTAAATTCGAATTGAG-TGGTATTCC 1516778 Query 552515 TCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 || || || | || || || |||||||||||||| || ||| ||||| | ||||| || Sbjct 1516777 ACCAGCACCAAGAGGTGTCCCACAAATTGAAGTTACCTTTGATGTCGATTCTAATGGTAT 1516718 Query 552575 TTTGAATGTGACTGC 552589 ||||| || |||| Sbjct 1516717 CTTGAACGTTTCTGC 1516703 Score = 176 bits (194), Expect = 4e-38 Identities = 425/640 (66%), Gaps = 14/640 (2%) Strand=Plus/Minus Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||||| | || || || |||| || ||||| | | | || | | || ||||| Sbjct 1094623 TATTGAAATTGACTCCTTTGTTGATGGTATTGACTTGAGTGAAACTTTAACAAGAGCCAA 1094564 Query 552023 ATTTGAAGATATTTGTTCT-GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 |||||||| ||| ||| ||| | |||||||| || | ||||||| ||| | |||| Sbjct 1094563 GTTTGAAGA-ATTGAATCTTGATTTATTTAGAAAGACCTTGAAACCAGTTGAAAAGGTTT 1094505 Query 552082 TAAGAGATTCAAAGATTGATAAATCCAAAG---TACATGAAATTGTGCTTGTTGGTGGAT 552138 || ||| || | | || || |||| | |||| ||||| ||||||||||| | Sbjct 1094504 TAGAAGACTCTGGGTTAGACAAG---AAAGATATTGATGACATTGTCCTTGTTGGTGGTT 1094448 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAA 552198 |||| |||||||| ||| | | || |||| || || ||| ||||||| ||| Sbjct 1094447 CTACCAGAATTCCAAAAGTCCAACAACTGTTGGAATCATACTTCGATGGTAAGAAAGCTT 1094388 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | || || | || || ||||| ||||| || | |||||| || ||||||| | | || Sbjct 1094387 CTAAAGGTATCAACCCTGATGAAGCTGTCGCATTTGGTGCTGCTGTTCAAGCTGGTGTTT 1094328 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | |||||| || ||| | || ||||||| | ||||||| | | | | Sbjct 1094327 TATCTGGA------GAGGAAGGTGTCGAAGATATTGTCTTATTAGATGTCAATGCATTGA 1094274 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | | ||| | ||||| || ||| | |||||| | | ||| | ||||| || | | Sbjct 1094273 CGTTAGGTATCGAAACCAGCGGTGGTGTCATGACTTCTTTGATCAAAAGAAACACCGCAA 1094214 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 | || || ||||||| | || || || | ||| |||||| | |||||| | Sbjct 1094213 TCCCAACAAAGAAATCTCAAATTTTCTCGACTGCTGTAGACAATCAACCAACTGTTATGA 1094154 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 | ||| ||| |||||| || ||| | ||||||||| || | | || | ||| Sbjct 1094153 TCCAAGTTTATGAAGGTGAGAGAGCCATGGTTAAAGATAACAACTTATTAGGAAAGTTTG 1094094 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | || |||||||||||| |||| | || || || ||||||||||| ||||| | Sbjct 1094093 AATTGACAGGTATTCCTCCATCTCCAAGAGGTGTTCCACAAATTGAAGTCACTTTTGCAT 1094034 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | ||||| ||||| |||||||| || ||||| ||||| Sbjct 1094033 TGGATGCTAATGGTATTTTGAAAGTCGCTGCTACCGATAA 1093994 Score = 167 bits (184), Expect = 2e-35 Identities = 329/483 (68%), Gaps = 14/483 (3%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| ||||||||||| || |||||||||||| |||||| |||| ||| ||||||| Sbjct 87062 GTTGAGATTATTGCCAACGAACAAGGTAACAGAGTTACTCCTTCTTTCGTTGCTTTCACA 87121 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | ||| ||| ||||||| || || || ||||||| || || || ||| Sbjct 87122 CCAGAAGAAAGATTAATTGGTGACGCTGCCAAGAATCAAGCTGCTTTGAACCCAGAGAAT 87181 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGA--CTGTTCAGG 550229 ||| | || |||||||||||||| ||||| ||||| || |||| ||| | || || Sbjct 87182 ACTGTCTTCGATGCTAAACGTTTGATTGGTAGAAGATTCGATGA--CGAATCAGTACAAA 87239 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||||||||| |||||| ||| | || | |||| ||| || |||||| | Sbjct 87240 ACGATATGAAGACTTGGCCATTCAAGATCATCGATGTCGATGGTGCTCCAGTTATTGAGG 87299 Query 550290 CTACTCATGAAGGATCTGTTAAACA-----ATTTTCACCAGAACAAATTTCATCTATGGT 550344 ||| | | || ||||| |||||| ||| || ||||||| ||||||| Sbjct 87300 ---TTCA--ATACTTGGGTGAAACAAAAACATTTTCTCCACAAGAAATTTCCGCTATGGT 87354 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| | || |||| | ||| || ||| ||| ||| | || | || || Sbjct 87355 TTTGACCAAGATGAGAGAAATCGCTGAAGCTAAGATTGCCCAAAAGGTCGAAAAGGCTGT 87414 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || ||||| ||||| ||||| || || | ||| | || || || ||||||||||| Sbjct 87415 CATCACTGTTCCAGCTTATTTCAACGATGCTCAAAGACAGGCCACAAAAGATGCTGGTTC 87474 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | || ||| | ||||| ||||| ||||| || |||||||| |||| || Sbjct 87475 CATTGCTGGTTTGAACGTTTTACGTATCATCAACGAACCAACAGCTGCTGCCATTGCCTA 87534 Query 550525 TGG 550527 || Sbjct 87535 CGG 87537 Score = 159 bits (176), Expect = 3e-33 Identities = 373/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||||| || ||||| || |||||||| || | |||||||||| | Sbjct 1095444 ATCGGTATTGATTTGGGTACCACCTACTCTTGTGTTGCCGTGATGAAAAATGGTAAGACT 1095385 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||| | || ||||| |||||||| |||| ||||||||||| || ||||||| || Sbjct 1095384 GAAATTTTGGCTAATGAACAAGGTAATAGAATCACTCCATCTTACGTAGCTTTCACTGAT 1095325 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||| || |||||||||| ||||| | || | | | ||||| | |||||| Sbjct 1095324 GAAGAAAGATTGATTGGTGATGCTGCAAAGAACCAGGTTGCAGCCAATCCAAAGAATACT 1095265 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 ||||||||| || | || ||||| | | | |||| ||||||| ||| Sbjct 1095264 ATTTTTGATATCAAGAGATTGATTGGTTTGAAATATGATGACAGATCTGTTCAAAAGGAT 1095205 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA-- 550292 || || |||| || || | || |||| ||| || || | | | | || Sbjct 1095204 ATCAAACATTTACCATTTAATGTTATTAACAGCGATGGTAAGCCAGCTGTACAGGTTAGC 1095145 Query 550293 CTCATGAAGGATCTGTTAAACAATTTTCA--CCAGAACAAATTTCATCTATGGTTTTAAT 550350 ||| |||| | ||| |||||||| || ||| |||| || |||| |||| Sbjct 1095144 GTCA--AAGGTGAAG--AAAAAATTTTCACTCCTGAAGAAATCTCTGGTATGATTTTGGG 1095089 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 || |||||||| | || | || | | ||| | ||||||| | || || | || Sbjct 1095088 TAAGATGAAACAGATTGCTGAAGATTATTTGGGTAAGAAAGTTACTCACGCCGTTGTTAC 1095029 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| ||||| || || || || | ||| | |||||||| |||||||| || |||||| Sbjct 1095028 TGTTCCAGCTTACTTCAACGATGCTCAAAGACAAGCTACCAAAGATGCCGGTACTATTGC 1094969 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||| | |||||| | | ||| | || ||||||||||| ||||| |||| || || | Sbjct 1094968 TGGTTTGAATGTTTTGAGAATTGTTAACGAACCTACTGCAGCTGCCATTGCTTACGGTTT 1094909 Query 550531 TGATAAACATAATGATCAA 550549 || ||| ||| ||| || Sbjct 1094908 AGACAAATCTAAGGATGAA 1094890 Score = 147 bits (162), Expect = 2e-29 Identities = 244/349 (70%), Gaps = 4/349 (1%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||| |||||||| || || || | || || | |||||||||||| ||||| Sbjct 87779 AGAACTGCTGCTGAAAGAGCTAAGAGAACTTTGTCCTCAGTCACTCAAACCACTGTTGAA 87838 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 || || || |||||||| || |||| | || ||||| | || |||| ||| ||| Sbjct 87839 GTCGACTCCTTATTTGACGGTGAAGATTTCGAGACTTCTATTACCAGAGCCAGATTCGAA 87898 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 ||| | | ||| | | || | || || |||||||| |||||||| || | ||| Sbjct 87899 GATTTGAATGCTGCTATGTTCAAGTCCACTATAGAACCAGTTGAACAAGTCTTGAAGGAT 87958 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | || ||| |||||| || | ||||| |||| | |||||||| ||||| |||||| Sbjct 87959 GCTAAAATTCCTAAATCTCAAATCGATGAAGTTGTTTTGGTTGGTGGTTCTACCAGAATT 88018 Query 552150 CCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG 552207 || ||| || | ||| ||||| | | ||| | ||||| ||||| | || | Sbjct 88019 CC-AAAGGTC-CAAAAGTTGTTATCTGACTTTTTTGACGGTAAGCAATTAGAAAAATCTA 88076 Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 | || |||||||| || ||||| || ||||| || |||||| ||||| Sbjct 88077 TCAACCCAGATGAAGCCGTTGCTTACGGTGCTGCTGTTCAAGGTGCTAT 88125 >seq19 Length=616425 Score = 95.1 bits (104), Expect = 1e-13 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||||| || ||||| |||||| | ||||| || ||||| || Sbjct 593047 TTTGG--ATGTTGTAATCAGATAAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGAT 593104 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | |||||| || ||||| ||||| ||||| || ||||| || || || || || Sbjct 593105 CAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATC 593164 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || |||| || | | ||| | |||| || |||||||| | |||||| || | Sbjct 593165 AATAGTGTCAGAA-GATTCAACTTCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAA 593223 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 593224 AAATTTGCAT 593233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293567312540