Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq41 311 1e-79 >seq41 Length=1599359 Score = 311 bits (344), Expect = 1e-79 Identities = 619/897 (69%), Gaps = 31/897 (3%) Strand=Plus/Plus Query 36885 TTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 || ||||| || ||||| |||| ||||| || || ||||| || | | ||| || || Sbjct 1218669 TTCTGATAATCGGAAACTC-TCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTT 1218727 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAG 37003 |||||| |||||||||||||| |||| | | | |||| || || ||| || Sbjct 1218728 TTCCATGAAATCAAATGGATT---TGTAACGTTGAAA-TACTTTTTGTTA---CCTAAAG 1218780 Query 37004 A-------AGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATAC 37056 || ||||| || |||||||| | ||||| |||||| || || |||| Sbjct 1218781 CGACTAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATAC 1218840 Query 37057 CAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCT 37115 | | || |||||| | ||||| |||| | || |||||| ||| ||||| || Sbjct 1218841 CCAATAACGATACTGGCAAAGCATCCATGAA-ATATCTTTTTTCAATTTCAACAGCTTCG 1218899 Query 37116 TTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTAAACAATA 37173 | | || || | |||| | | ||| || |||||| |||| || || | Sbjct 1218900 GTGATAATCTTTTCTATAATTGATG--GTTCTGGTTTATTTTTCAAATGAGCGAATAACA 1218957 Query 37174 AACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTA 37233 |||| |||||||| |||||||||||||||||| | ||||| ||||| |||||||| | Sbjct 1218958 AACAAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCA 1219017 Query 37234 ATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGA 37293 | || ||||||||||| | || || | |||||| || || ||||| || ||||| |||| Sbjct 1219018 AACCAGGCATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGA 1219077 Query 37294 AAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAG 37353 |||||||||||| ||| |||||||| || | | | | ||||| ||| | | ||| Sbjct 1219078 AAATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTT 1219137 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 ||||||| | ||| ||| ||||| ||| ||||| | ||| | || || || | Sbjct 1219138 GAATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCAT 1219197 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 | || | || | |||| | ||| | ||||||||||| || |||||| || Sbjct 1219198 TGAACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAG 1219257 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 | ||||| ||||||||||| || || ||||| |||||||||||| | ||||||| | Sbjct 1219258 TCTCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAA 1219317 Query 37534 ATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 |||||| || | | | ||| ||| | || ||||||||||| || |||||| ||| Sbjct 1219318 TTTGAACTTCTGCTGAGAAA-TTCTCTACCAAATTTTCATTAACGATACCATCAGAAGCG 1219376 Query 37593 GCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAAT-TTTTT 37648 || || || | ||||| | | | || ||| |||||||| | || || | || || Sbjct 1219377 GCGAAAAATGCCAAGACCCT-TGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATT 1219435 Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGC 37708 |||||||| ||||| ||||| | ||| | ||| ||| | ||||||||| || ||| Sbjct 1219436 CCAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGC 1219495 Query 37709 ACGTTTATACATCGT-CCAAATATCATTATGTTGTATTGGAAATATTACAAATCTAT 37764 | || || | | | |||||| |||| || || |||||||||| |||||||||| Sbjct 1219496 TCTCTTGTA-AGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316459417840