Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq27 149 3e-31 seq29 122 4e-23 >seq27 Length=921605 Score = 149 bits (164), Expect = 3e-31 Identities = 285/420 (68%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| |||||||| |||||||| | ||| |||||||||||| || | |||||||| || Sbjct 395359 CATGAATAAATCAGGAATCCAAAGTGCTGGAAATAAATCTCTGGCACGAATTTCTTCCTT 395418 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 |||||||| ||| | | ||| | |||||| ||||| |||| ||||||||||| | || Sbjct 395419 ACCGTGATTTTTTCTAATATCAATGAAATCGAAAATGTCTGCATGCCATGGTTCAAGGTA 395478 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||||| ||| |||||| |||||||| || || || | ||||| | || Sbjct 395479 TAAAGCAAAAGCGCCTGGTCTTTTGTTACCACCTTGGTCGACATAACGAGCAGTATTGTT 395538 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 || ||| | ||| || | ||| || | || || || || | ||| | ||| Sbjct 395539 AAAGACTCGAATCATGGGGATTAAACCGTTAGAGGTACCATTAGTACCTGCAATGTAGGA 395598 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || || | ||| | || ||| | || || |||||||| ||| ||||| Sbjct 395599 ACCGGTAGAACGAATGTTATGGATATGTAGCCCAATACCACCAGCAGTTTTGGAAATCAT 395658 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| || | ||||| ||||||||| || ||| | ||||| ||| ||| Sbjct 395659 AGCACATTCCTTCAAGGTATCATAAATTCCTTCAATAGAATCGTCCTTCATAGCTACTAA 395718 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| ||||| | ||| | |||| || || | || ||||| || || | ||||| Sbjct 395719 GAAACATGAAGACATTTGTGGGTGAGGAGTACCAGCGTTGAATAAAGTTGGAGATGCATG 395778 Score = 104 bits (114), Expect = 1e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 |||||| ||||||||||| | | | | ||| || |||||||| || |||||||| Sbjct 394459 AAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGGCTCGAAACATTC 394518 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 ||||| |||||| |||||||| || ||||| ||||||||| ||| | | ||| ||||| Sbjct 394519 ATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAAGAGTAGAGAATT 394578 Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 || | ||||| || ||| | ||||| || | |||||||| Sbjct 394579 CCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATC 394623 >seq29 Length=1538644 Score = 122 bits (134), Expect = 4e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 || |||||||||| ||| |||| |||||||| ||||||| ||||||||| || ||||| Sbjct 479063 TCAGGAATCCACAACGCAAAAAACAAATCTCTAGCTCTCAGTTCTTCTTTACCATGATTT 479004 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 ||| || | | ||||| ||||| || ||||||||||| |||| ||||||| | || Sbjct 479003 TTTCGGAGTTGCAGAAAATCGAAAATGTCGGAGTGCCATGGCTCTAGATAGATACAATAA 478944 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 || | ||| || |||||||| || ||||| ||||| | || || || Sbjct 478943 GCGCCAGGACGTTTGTTACCGCCTTGATCAACATATCTAGCAGTATTGTTAAATACACGT 478884 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTT 26154 | |||||| ||||| ||| | |||| ||| || Sbjct 478883 AGCATTGGCACTAAACCACTGGAAATTCCATT 478852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039858139450