Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq29 174 2e-38 >seq29 Length=1538644 Score = 174 bits (192), Expect = 2e-38 Identities = 501/760 (66%), Gaps = 22/760 (3%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| |||||| || | | || || || || |||||||||||| | ||||||||||| Sbjct 241628 ACACAAATAGGTGCTCCTGCTGGTCCACCTCCACCATGTGGAATAGAAAATGTCTTATGC 241687 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || ||||| || || |||||||| | |||| |||| | || ||| || |||||| Sbjct 241688 AAGTTCAGATGGCAAACGTCTGCACCTAAATCACCTGGTGACGTTAAACCAACTTGTGCA 241747 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT--A 138360 || | ||| |||||||| | ||| || || ||||||| | ||| || | | | || | Sbjct 241748 TTCATATTAGCACCATCTAAATAAACTTGGCCACCATGTTGATGGACCAAATCAAATGCA 241807 Query 138361 TCTGTCTG-ATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 ||| || | || |||||||| ||||| ||| || |||||||| ||||| || Sbjct 241808 TCT---TGAACACCTGGTTCAAATAAACCATAAGTGGAGGGATATGTTATCAT----CAC 241860 Query 138420 GAGAGTTCAAATGTATTCATGATT----GCTTTCTTCTCTAGATCTTTGATGTCTATGTT 138475 || | || | || ||| || ||||| || ||||||||| | |||| Sbjct 241861 CGCAGCTAAATCATCTTTATGTTTTCCAACTTTCAACTTTAGATCTTTTAAATCTAGCGA 241920 Query 138476 GCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535 |||||| ||| | || ||||||||||| || |||| | || ||| || Sbjct 241921 TCCATCAGGTAAACAGTGAACCGGGACAACTTTCATACCACACATGGCAGCTGAAGCGGG 241980 Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCC 138595 || || ||||| || || | || || | ||||||||| | | || || ||| | Sbjct 241981 GTTGGTACCATGAGCAGAAACGGGAATTAAACATACATTACGATGGGTTTCACC-GATAC 242039 Query 138596 T-TGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654 | | |||||| | ||| || | ||| | || ||||| |||| || | ||| | Sbjct 242040 TGTCCAGATATGATCTGATGACTCTTAATCCAGTGTATTCACCTTGTGCACCAGAGTTTG 242099 Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATAT--CACATAACCATTTCTGTAAGTCATC 138712 |||| || || | | ||| ||||| ||||||| |||| | | ||||| | || | Sbjct 242100 GTTGCAACGAAACACCATCGAAACCAGTGATATTGCACAAATCTCTTTCTAAAGATC--C 242157 Query 138713 TATTATCTTTTGATAACCCATGGTCTGTATCATAGGTGTATGTGGATGCACGTTGGCAAA 138772 | ||| | || || || || ||| ||| || |||| ||| ||||| Sbjct 242158 GAGTATTTCTTTGTAGCCTTCTACTTGGTTCAATGGTTGGAACGGGTGCATGTTTGCAAA 242217 Query 138773 TTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAA-CTAC 138831 || ||||| | ||||||| ||| ||| ||||||||||||||| ||| | | Sbjct 242218 TTGCGGCCATGTAATTGGCATCATTTCAACTGTACTATTTAGTTTCATTGTACAAGATCC 242277 Query 138832 CAAGTGGAACCATACCATTTACTAATGAGAAATCTTTAGAGCATAACTCATAGATATATC 138891 |||| |||| ||| ||| | || || ||||| ||| ||| || | ||||| Sbjct 242278 CAAG-GGAATCATGGAATTGGCCAACGACAAATCACGAGATTGTAAACGATGCAAATATC 242336 Query 138892 TCATCATGTCAGTTTCACTGTGATACTTATTGAATACTTC 138931 ||| ||| |||| |||||||| | ||||| ||| | ||| Sbjct 242337 TCAACATAGCAGTCTCACTGTGGTGCTTATGGAAAATTTC 242376 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 139314 GCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTT 139373 ||||| || ||||| || || || || ||||| | | | ||||| || ||||||||| Sbjct 242795 GCTTGAGCAGTGCAAATATTGGATGTAGCCTTGTCACGTTTGATATGTTGTTCTCTAGTT 242854 Query 139374 TGTAGTGCTAATCTGTATG-CAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCT 139432 ||||| ||||| | ||| | | || || ||| | ||| || ||| |||||||| Sbjct 242855 TGTAGCGCTAAAC-GTAGGGCGGGTTTACCTAAACGGTCTTTCGATACACCAACAATTCT 242913 Query 139433 GCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCC 139492 ||| || || ||||| || | ||||| | ||||| ||||||||||| ||||| || Sbjct 242914 GCCCGGAATTTTTCTATTTAATTTGTCAATCACAGCAAAAAATGCAGCATGTGGACCACC 242973 Query 139493 GTATCCCATAGGAATACCAAACCTTTG 139519 |||||||| |||| |||||| ||||| Sbjct 242974 ATATCCCATTGGAACACCAAATCTTTG 243000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998067075920