Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq27 232 8e-56 >seq27 Length=921605 Score = 232 bits (256), Expect = 8e-56 Identities = 889/1383 (64%), Gaps = 25/1383 (2%) Strand=Plus/Minus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||| | || || | || ||||| || ||| || | || || | || || ||| Sbjct 395864 TCATGAGAGTATCAGTTGGTATCCATGGTACAGATATCAAGTCCGTTATAGAAACTTACA 395805 Query 75285 ACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 75343 || |||||| | ||||||| ||||| || ||| | ||||| | ||||| |||||||| Sbjct 395804 ACTTGATGTCTCTAAGGTAT-TTCATCCATGCATCTCCAACTTTATTCAACGCTGGTACT 395746 Query 75344 CCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 75403 || || || ||||| || ||| | | || | ||||| || || || | || Sbjct 395745 CCTCACCCACAAATGTCTTCATGTTTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGA 395686 Query 75404 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 75463 || |||| || | | ||| ||||| || || || ||||| ||||||||| | Sbjct 395685 ATTTATGATACCTTGAAGGAATGTGCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTA 395626 Query 75464 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 75523 || |||||| | | | | | || ||| || || |||||| || | Sbjct 395625 CATATCCATAACATTCGTTCTACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAAC 395566 Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583 ||| | || || ||| |||| || |||||| || || || ||||| | |||| | || Sbjct 395565 GGTTTAATCCCCATGATTCGAGTCTTTAACAATACTGCTCGTTATGTCGACCAAG-GTGG 395507 Query 75584 CGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | ||| || | | || | ||| | |||||||||||||| || || | || Sbjct 395506 TAACAAAAGACCAGGCGCTTTTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGA 395447 Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTC 75699 ||| |||| | || || || ||| | ||||| ||| |||||| | ||| | Sbjct 395446 TTTCATTGATATTAGAAAAAATCACGGTAAGGAAGAAATTCGTGCCAGAGATTTATTTCC 395387 Query 75700 ATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCT 75759 | | || |||||||| || | |||||||| || || | || ||| | ||| | | Sbjct 395386 AGCACTTTGGATTCCTGATTTATTCATGAAACGTGTCCAAGAAAACGGTGAGTGGACCTT 395327 Query 75760 TTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 || | |||| | || |||||| | | || | | || ||||| |||| | Sbjct 395326 GTTTTCTCCAAGTGAAGCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTT 395267 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-T 75878 ||| | || | | |||||| | | | || | |||| | || || | Sbjct 395266 ATACGAACGTTACGTTGCAGAGGGTCGCGGTAGAAAAACCATTAAAGCC-CAGAAATTGT 395208 Query 75879 GGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATG 75938 || | || || | | | || || || ||||| || |||| ||||| || ||||||| Sbjct 395207 GGTACGCCATCTTGGAGGCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATG 395148 Query 75939 CTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCA 75998 ||||||||| |||||||||||| |||||||| || || ||||| || || | || Sbjct 395147 CTTGTAACACGAAGAGTAACCAGAAGAATTTAGGTACTATCAAATCTTCTAACTTATGTT 395088 Query 75999 CGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCG 76058 |||||| |||| ||| | | | |||||||| |||||||| ||| | || || || | Sbjct 395087 GTGAAATTGTAGAATACTCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTG 395028 Query 76059 CCCTTCCAAA--GTATGTCAAT-----GAAGAGACT----CGCACT--TTTGATTATGAA 76105 | | ||| |||| |||| ||||| | | || | | | | | || Sbjct 395027 CGTTGCCATCCTGTAT-TCAAACAGCGGAAGATGGTAAGACCCAATGGTATAACTTTGCT 394969 Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 | || || ||||| | ||| || |||| ||| ||||| |||||||||| | || Sbjct 394968 AGGCTACACGAAATTGCTAAGGTTATTACTCGTAATTTAAACAAAGTCATTGACCGTAAC 394909 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | |||||| ||| || ||| ||||| ||| | ||||||||||| | | | ||| Sbjct 394908 TATTATCCAGTTATTGAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGT 394849 Query 76226 GTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCC 76285 ||| | ||| | || ||| ||| || ||| || |||| || || | || ||| Sbjct 394848 GTTAATGGTTTGGCTGATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGCC 394789 Query 76286 AAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGT 76345 ||| | ||||| || |||||||||||||| |||||||| | |||| | ||| Sbjct 394788 AAGAACTTGAATATTCAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGT 394729 Query 76346 GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG 76405 ||||||||| || | ||| | ||||| || | ||| |||||||| | || ||||| Sbjct 394728 GAATTGGCTCAAAAAGATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGT 394669 Query 76406 GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGATGTTCT 76464 || | || | |||||||| |||| || |||| | | || || ||||| | | Sbjct 394668 GTTTTGCAATATGATATGT-GGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTT 394610 Query 76465 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAAC 76524 || | || ||||| | ||| | | || ||| | |||||||||||||||| Sbjct 394609 GAAACAGAAAATTAAGGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAAC 394550 Query 76525 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACAT 76584 || || || | ||||| || || |||||||||| || || |||| ||| | ||||| Sbjct 394549 TGCATCAACATCTCAAATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACAT 394490 Query 76585 CTA 76587 || Sbjct 394489 GTA 394487 Score = 100 bits (110), Expect = 3e-16 Identities = 175/253 (69%), Gaps = 19/253 (8%) Strand=Plus/Plus Query 27790 CCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAA---CACCAAT-----TTCCTGCA 27841 |||||||| || |||||||| |||||||||||| || |||| || ||||| Sbjct 541337 CCAAATCCGCCAAGTCCTCTCTCAGTCTCTTCAAGACTTTCAACAATCACAATTTCTGCA 541396 Query 27842 -CATCGGGTGTTTCACAGCGCT--CAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTA 27898 |||| |||| || | | || ||||| || | ||| || ||||| || | Sbjct 541397 TCATC--------CACAATTCTTTCTAAGATGAGTTGAGCAACGCGGTCACCTTTATTAA 541448 Query 27899 CCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGG 27958 |||||| ||||| | |||||||| | || ||||| ||||| |||||||| || Sbjct 541449 TCTCAAAATCTTTATTAGAATGATTGAATAAGACAACTTTCACTTCGCCTGTATAATCTC 541508 Query 27959 GATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTG 28018 || | ||||| ||||| |||||||||||| || ||||| | ||||||| ||| | Sbjct 541509 TGTCTACGACACCAGCACCTGTTTGAATACCATGTTTTACAGCTAAGCCGGATCTTGGGG 541568 Query 28019 CAACACGACCATA 28031 ||| | |||||| Sbjct 541569 CAATTCTACCATA 541581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569256972480