Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq27 232 8e-56
>seq27
Length=921605
Score = 232 bits (256), Expect = 8e-56
Identities = 889/1383 (64%), Gaps = 25/1383 (2%)
Strand=Plus/Minus
Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284
||||| | || || | || ||||| || ||| || | || || | || || |||
Sbjct 395864 TCATGAGAGTATCAGTTGGTATCCATGGTACAGATATCAAGTCCGTTATAGAAACTTACA 395805
Query 75285 ACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 75343
|| |||||| | ||||||| ||||| || ||| | ||||| | ||||| ||||||||
Sbjct 395804 ACTTGATGTCTCTAAGGTAT-TTCATCCATGCATCTCCAACTTTATTCAACGCTGGTACT 395746
Query 75344 CCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 75403
|| || || ||||| || ||| | | || | ||||| || || || | ||
Sbjct 395745 CCTCACCCACAAATGTCTTCATGTTTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGA 395686
Query 75404 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 75463
|| |||| || | | ||| ||||| || || || ||||| ||||||||| |
Sbjct 395685 ATTTATGATACCTTGAAGGAATGTGCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTA 395626
Query 75464 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 75523
|| |||||| | | | | | || ||| || || |||||| || |
Sbjct 395625 CATATCCATAACATTCGTTCTACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAAC 395566
Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583
||| | || || ||| |||| || |||||| || || || ||||| | |||| | ||
Sbjct 395565 GGTTTAATCCCCATGATTCGAGTCTTTAACAATACTGCTCGTTATGTCGACCAAG-GTGG 395507
Query 75584 CGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639
| ||| || | | || | ||| | |||||||||||||| || || | ||
Sbjct 395506 TAACAAAAGACCAGGCGCTTTTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGA 395447
Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTC 75699
||| |||| | || || || ||| | ||||| ||| |||||| | ||| |
Sbjct 395446 TTTCATTGATATTAGAAAAAATCACGGTAAGGAAGAAATTCGTGCCAGAGATTTATTTCC 395387
Query 75700 ATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCT 75759
| | || |||||||| || | |||||||| || || | || ||| | ||| | |
Sbjct 395386 AGCACTTTGGATTCCTGATTTATTCATGAAACGTGTCCAAGAAAACGGTGAGTGGACCTT 395327
Query 75760 TTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819
|| | |||| | || |||||| | | || | | || ||||| |||| |
Sbjct 395326 GTTTTCTCCAAGTGAAGCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTT 395267
Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-T 75878
||| | || | | |||||| | | | || | |||| | || || |
Sbjct 395266 ATACGAACGTTACGTTGCAGAGGGTCGCGGTAGAAAAACCATTAAAGCC-CAGAAATTGT 395208
Query 75879 GGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATG 75938
|| | || || | | | || || || ||||| || |||| ||||| || |||||||
Sbjct 395207 GGTACGCCATCTTGGAGGCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATG 395148
Query 75939 CTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCA 75998
||||||||| |||||||||||| |||||||| || || ||||| || || | ||
Sbjct 395147 CTTGTAACACGAAGAGTAACCAGAAGAATTTAGGTACTATCAAATCTTCTAACTTATGTT 395088
Query 75999 CGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCG 76058
|||||| |||| ||| | | | |||||||| |||||||| ||| | || || || |
Sbjct 395087 GTGAAATTGTAGAATACTCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTG 395028
Query 76059 CCCTTCCAAA--GTATGTCAAT-----GAAGAGACT----CGCACT--TTTGATTATGAA 76105
| | ||| |||| |||| ||||| | | || | | | | | ||
Sbjct 395027 CGTTGCCATCCTGTAT-TCAAACAGCGGAAGATGGTAAGACCCAATGGTATAACTTTGCT 394969
Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165
| || || ||||| | ||| || |||| ||| ||||| |||||||||| | ||
Sbjct 394968 AGGCTACACGAAATTGCTAAGGTTATTACTCGTAATTTAAACAAAGTCATTGACCGTAAC 394909
Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225
| |||||| ||| || ||| ||||| ||| | ||||||||||| | | | |||
Sbjct 394908 TATTATCCAGTTATTGAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGT 394849
Query 76226 GTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCC 76285
||| | ||| | || ||| ||| || ||| || |||| || || | || |||
Sbjct 394848 GTTAATGGTTTGGCTGATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGCC 394789
Query 76286 AAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGT 76345
||| | ||||| || |||||||||||||| |||||||| | |||| | |||
Sbjct 394788 AAGAACTTGAATATTCAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGT 394729
Query 76346 GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG 76405
||||||||| || | ||| | ||||| || | ||| |||||||| | || |||||
Sbjct 394728 GAATTGGCTCAAAAAGATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGT 394669
Query 76406 GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGATGTTCT 76464
|| | || | |||||||| |||| || |||| | | || || ||||| | |
Sbjct 394668 GTTTTGCAATATGATATGT-GGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTT 394610
Query 76465 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAAC 76524
|| | || ||||| | ||| | | || ||| | ||||||||||||||||
Sbjct 394609 GAAACAGAAAATTAAGGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAAC 394550
Query 76525 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACAT 76584
|| || || | ||||| || || |||||||||| || || |||| ||| | |||||
Sbjct 394549 TGCATCAACATCTCAAATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACAT 394490
Query 76585 CTA 76587
||
Sbjct 394489 GTA 394487
Score = 100 bits (110), Expect = 3e-16
Identities = 175/253 (69%), Gaps = 19/253 (8%)
Strand=Plus/Plus
Query 27790 CCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAA---CACCAAT-----TTCCTGCA 27841
|||||||| || |||||||| |||||||||||| || |||| || |||||
Sbjct 541337 CCAAATCCGCCAAGTCCTCTCTCAGTCTCTTCAAGACTTTCAACAATCACAATTTCTGCA 541396
Query 27842 -CATCGGGTGTTTCACAGCGCT--CAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTA 27898
|||| |||| || | | || ||||| || | ||| || ||||| || |
Sbjct 541397 TCATC--------CACAATTCTTTCTAAGATGAGTTGAGCAACGCGGTCACCTTTATTAA 541448
Query 27899 CCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGG 27958
|||||| ||||| | |||||||| | || ||||| ||||| |||||||| ||
Sbjct 541449 TCTCAAAATCTTTATTAGAATGATTGAATAAGACAACTTTCACTTCGCCTGTATAATCTC 541508
Query 27959 GATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTG 28018
|| | ||||| ||||| |||||||||||| || ||||| | ||||||| ||| |
Sbjct 541509 TGTCTACGACACCAGCACCTGTTTGAATACCATGTTTTACAGCTAAGCCGGATCTTGGGG 541568
Query 28019 CAACACGACCATA 28031
||| | ||||||
Sbjct 541569 CAATTCTACCATA 541581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569256972480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |