Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq27 201 3e-46
seq41 140 1e-27
seq43 116 1e-20
seq17 89.7 2e-12
seq29 84.2 6e-11
>seq27
Length=921605
Score = 201 bits (222), Expect = 3e-46
Identities = 619/944 (66%), Gaps = 29/944 (3%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645
|||| || || |||||||| || |||||||| | || | | |||||||||||| |||
Sbjct 395028 CAATGGAAGCTAGATTACAAACAGCAGTCTCATCTGGAGCAGA-GTATTCTACAATTTCA 395086
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
|| || | ||||||| ||||| || |||||||||||||||||| || ||||||||
Sbjct 395087 CAACATAAGTTAGAAGATTTGATAGTACCTAAATTCTTCTGGTTACTCTTCGTGTTACAA 395146
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765
|||||||| ||||| ||| ||||||| || || || | || || |||| || |
Sbjct 395147 GCATCCTTATATAGCATGAATGGGGTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGTAC 395206
Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG---CCT-TCCGACTCATATTTCAT 155821
|| | | |||| ||||| | || || || | ||| | | || | ||| |
Sbjct 395207 CACAATTTCTGGGCTTTAAT--GGTTTTTCTACCGCGACCCTCTGCAACGTAACGTTCGT 395264
Query 155822 ATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGC- 155880
||| | |||| | || || | ||| |||| | || || | ||| | ||
Sbjct 395265 ATAACTC-TTCGA-ACTCTTCGGCATAAACATCAGCTAAACCTGG-CGCTTCACTTGGAG 395321
Query 155881 AAAACAGCGACCAAATTTTATTACCGATT------ACACGCTCCATAAATACATCACTCG 155934
|||||| | ||| | |||| || ||||| | ||| |||| ||||
Sbjct 395322 AAAACAAGGTCCAC------TCACCGTTTTCTTGGACACGTTTCATGAATAAATCAGGAA 395375
Query 155935 CCCAAATAGCATAGAAA-AGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGT 155993
||||| || | |||| | || || || || || | |||||||| || |
Sbjct 395376 TCCAAAGTGC-TGGAAATAAATCTCTGGCACGAATTTCTTCCTTACCGTGATTTTTTCTA 395434
Query 155994 AGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA 156053
| || | ||| || ||| || | ||| ||| || || || | ||||||| ||
Sbjct 395435 ATATCAATGAAATCGAAAATGTCTGCATGCCATGGTTCAAGGTATAAAGCAAAAGCGCCT 395494
Query 156054 TTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATA 156110
|| ||| ||||| || || ||||| |||||||| || || ||||| | | |||
Sbjct 395495 GGTCTTTTGTTACCACCTTGGTCGACATAACGAGCAGTATTGTTAAAGACTCGAATCATG 395554
Query 156111 GGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACA 156170
|| || | ||| || || || ||||| || || ||| | ||||| | || ||||
Sbjct 395555 GGGATTAAACCGTTAGAGGTACCATTAGTACCTGCAATGTAGGAACCGGTAGAACGAATG 395614
Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA 156230
||||| |||||||| ||||||||||| | ||| ||||| ||| |||||||| |
Sbjct 395615 TTATGGATATGTAGCCCAATACCACCAGCAGTTTTGGAAATCATAGCACATTCCTTCAAG 395674
Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290
|||| |||| |||||||||||||| || | ||| | || || | || ||| | |
Sbjct 395675 GTATCATAAATTCCTTCAATAGAATCGTCCTTCATAGCTACTAAGAAACATGAAGACATT 395734
Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350
|| || | || || ||||||||||||| || || | |||||| || |||||| | |
Sbjct 395735 TGTGGGTGAGGAGTACCAGCGTTGAATAAAGTTGGAGATGCATGGATGAAATACCTTAGA 395794
Query 156351 GACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAG 156410
||||| | | ||| || || ||| || | || | || || |||| | ||
Sbjct 395795 GACATCAAGTTGTAAGTTTCTATAACGGACTTGATATCTGTACCATGGATACCAACTGAT 395854
Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470
|| ||||| | ||| |||||||| || ||| | | |||| | | ||| || ||
Sbjct 395855 ACTCTCATGATTAAATGTTGAGGACGTTCAGCAACCTCACCATTCGTCCTCAGCAGATAA 395914
Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
| ||||||| || ||||| || || || | || |||||||
Sbjct 395915 GAACGTTCCAATGTCTTAAATCCAAAGTAGTTGAATTGAAAATC 395958
Score = 134 bits (148), Expect = 4e-26
Identities = 258/378 (68%), Gaps = 2/378 (1%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| || || | | | ||||| || |||| | |||| ||| |||||| |
Sbjct 546354 CTATCAAATCTTCCTGGTCTCATCAATGCAGGATCTAGAACGTCGGGTCTATTTGTTCCC 546295
Query 288910 GCCAATACAACAA-TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||| | | ||| || | |||| ||| |||||||| || | ||||||
Sbjct 546294 GCTAAAACAACCACTTGATCCGATGTGCTAAAA-CCATCCATCTCCACCAACAGTTGATT 546236
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
| || ||| ||||||||||| || |||| | |||| | || ||| | |||
Sbjct 546235 TAAGGTAGCTTCTCTTTCATCATTCGAGCCTCCCATAGCACCACCTTTGCCCCTCTCTTT 546176
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||||| ||||| ||||| || | ||||| | | | |||| ||| ||| || | |
Sbjct 546175 ACCAATGGCATCGATTTCATCTACAAAAATGATAGAAGGAGCCATTTTTCTTGCTTGTTC 546116
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||| || || | || | || || |||| ||| ||| ||||||| |||||||||||| |
Sbjct 546115 AAACAAATCACGAACTCTTGAAGCACCAACACCGACAAACATTTCAACAAATTCAGAACC 546056
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || || ||| | ||| |||||| || ||| || |||||| | |||||
Sbjct 546055 AGAAACGGAAAGGAAGGGTACCCCTGCTTCACCAGCTGTGGCTTTCGCCAATAAAGTCTT 545996
Query 289209 ACCTGTTCCAGGTGGTCC 289226
|||||| ||||| || ||
Sbjct 545995 ACCTGTACCAGGAGGCCC 545978
>seq41
Length=1599359
Score = 140 bits (154), Expect = 1e-27
Identities = 500/756 (66%), Gaps = 28/756 (4%)
Strand=Plus/Minus
Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262
|||||| | ||| ||||| | | | || || ||||| || || ||||||||| |||
Sbjct 1219416 ATGAAAGATTTTTCATTTCAAGGGTCTTGGCATTTTTCGCCGCTTCTGATGGTATCGTTA 1219357
Query 133263 TTGAAAATTTAGGAACACGGTTTATGGG-AGAAGTTCAACTGGCCGAAGCCC-GTGCCTT 133320
||||||||| || | | ||| | | |||||||||| | | |||||| ||| ||
Sbjct 1219356 ATGAAAATTT-GGTAGAGAATTTCTCAGCAGAAGTTCAAATTCCTGAAGCCAAGTGT-TT 1219299
Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGA 133380
||||||| | || ||| |||||||||||| |||||| || || ||| || || ||
Sbjct 1219298 TTATGGGTTTCAAATTATGATGGAAAATATTCATTCTGAGACTTACTCTTTACTGATCGA 1219239
Query 133381 TACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGAAT-TTC 133439
|||||| |||||||| | | | | | ||||| || | | | ||| |||
Sbjct 1219238 TACTTATATCAAAGACCCAAAGGAAAGTGATTTCTTGTTCAATGCTA-TCGATAATATTC 1219180
Query 133440 CTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTT 133499
| |||||| | ||| | || ||||| |||| |||||| || || | ||| | ||
Sbjct 1219179 CACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGATTCAAGATAGCAATGCAATTT 1219120
Query 133500 TTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCT 133559
| ||| | | ||||| ||||||| | | || || ||||| ||| |||| | || |
Sbjct 1219119 TCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTATTTTCTTCTCTGGTTCCTT-T 1219061
Query 133560 GCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAA 133618
||| |||| |||||| | || ||| ||| | | ||||| || ||||| || ||
Sbjct 1219060 GCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTGGTTTGACCTTTTCAAATGAG 1219001
Query 133619 CTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC-CGTTT-TACTTCACTCTAAAT 133676
| |||| || || || | | || || || ||||| |||| | ||| ||| ||
Sbjct 1219000 TTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCTTGTTTGTTATTCGCTC---AT 1218944
Query 133677 TAGAGCGACCACTCAAAAAGAATAA-GATTGAAGAAATTATTAGAGAAGCGGTTGAAATT 133735
| || | | || || | || || ||| | ||||| | ||||| |||||||||
Sbjct 1218943 TTGAAAAATAAACCAGAACCATCAATTATAGAAAAGATTATCACCGAAGCTGTTGAAATT 1218884
Query 133736 GAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGATGTGCT 133794
|| || | ||| |||| |||| || || ||| | |||||||||| | ||
Sbjct 1218883 GAAAAAAGATATTTCATGGATGCTTTGCCAGTATCG-TTATTGGGTATGAATGCCGATCT 1218825
Query 133795 GATGCAGCGTTATATTGAATTTGTAGCTGACAG---ATTGGCCGTTCAGTTAGGTGGGGA 133851
||| | | || |||||||||| ||||| || ||| | || | |||||| |
Sbjct 1218824 AATGAACCAATACGTTGAATTTGTCGCTGATAGACTATTAGTCGCT---TTAGGTAACAA 1218768
Query 133852 TAAG-ATTT-ACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAAT-C 133908
||| |||| | ||| | |||||||| || | ||||| | |||| ||||| |
Sbjct 1218767 AAAGTATTTCAACGTT--ACAAATCCATTTGATTTCATGGAAAACATT-TCATTGGCTGG 1218711
Query 133909 AAAGACTAATTTCTTCGAGGCGAGGGTAGCCGAATA 133944
|||||||| ||||||||| ||| || |||| ||
Sbjct 1218710 TAAGACTAACTTCTTCGAGAAGAGAGTTTCCGATTA 1218675
>seq43
Length=816610
Score = 116 bits (128), Expect = 1e-20
Identities = 145/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTC-TTACGGT 302549
|| || || || || || ||| | ||||||||| ||| | || | ||| || |||
Sbjct 328046 TCCATACCATCCTCACCATAGACAAACTGAATGACGTTGCCCA-GTGAGTTCCTTGTGGT 327988
Query 302550 CATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACC 302609
|||||||| || |||||| ||||| | | ||| | |||||||| |||||||||||
Sbjct 327987 ACTATCATAATGAACCATAATATCTTCTAGAGCCTTCACCAAACGACGTTGAATATAACC 327928
Query 302610 AGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAA 302669
||| || ||||| |||||||| || |||| ||| |||||||||||||||| |||||
Sbjct 327927 TGTTTCAGCCGTTTTAACAGCTGTGTCGATTAAACCTTCACGACCACCCATAGCGTGGAA 327868
Query 302670 GAATAGCTCTTCCGGT 302685
||| | || | ||||
Sbjct 327867 GAAGAATTCCTGCGGT 327852
>seq17
Length=1402967
Score = 89.7 bits (98), Expect = 2e-12
Identities = 173/253 (68%), Gaps = 8/253 (3%)
Strand=Plus/Minus
Query 251412 ACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTC-ATATAGCCGACCCT 251470
|||||| || ||| ||||| || || | ||||| || || || || | | || |
Sbjct 421120 ACCACAGATACCACAGACATGTACTCTAAATGCATCTGAGGCCTCCATCAATCTTTCCTT 421061
Query 251471 TGG---TGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAAC 251527
| | ||||||| ||||| || | ||||||||||||||| |||||||||||||| |
Sbjct 421060 TAGGAATGAAGCG----GCACCATGAGCAATCATACAATCACGTTCCATTTCACCGAATC 421005
Query 251528 GAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGAC 251587
| ||||||||| | | |||||||| |||| || | || ||| ||| || |
Sbjct 421004 TCAAACCACCATCTCTGGATCTACCCTCAACAGGTTGTCTCGTTAGAACTTGCATTGGCC 420945
Query 251588 CGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGG 251647
| || | ||| |||||||| ||||||||| | ||||| ||||| | | |
Sbjct 420944 CACGGGCTCTTGCATGAATCTTATCATCCACCATATGCCTTAGACGTTGGTAATAGGTAG 420885
Query 251648 GACCGATGAAGAT 251660
| |||| ||||||
Sbjct 420884 GTCCGAAGAAGAT 420872
Score = 87.8 bits (96), Expect = 5e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| |||||||||||||||||||||||||||||||| | | || ||||||||| |
Sbjct 421047 GCACCATGAGCAATCATACAATCACGTTCCATTTCACCGAATCTCAAACCACCATCTCTG 420988
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|| ||||||| || | ||| | |||| ||| |||| || | || | || |
Sbjct 420987 GATCTACCCTCAACAGGTTGTCTCGTTAGAACTTGCATTGGCCCACGGGCTCTTGCATGA 420928
Query 233393 ATTTTATCTTTAACCATATGC 233413
|| ||||| | |||||||||
Sbjct 420927 ATCTTATCATCCACCATATGC 420907
Score = 87.8 bits (96), Expect = 5e-12
Identities = 209/312 (67%), Gaps = 17/312 (5%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| ||||| | | ||| || ||||| ||||| | || ||||| |
Sbjct 640747 CTATCAAATCTACCCGGTCTCAGTAAAGCACTATCTAAGATATCAGGCCTATTTGTCCCG 640806
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCAT----ACTTGTTAAAATTTG 288965
|| | ||||||| | || | | | ||||||| ||||| ||| || | |||
Sbjct 640807 GCAAGAACAACAACATGATCTGCTGGAGTAAATCCGTCCATTTCAACTAGT----AGTTG 640862
Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA---TCACCCGAATCGCTCCt 289022
||| | || | ||||||||| ||||||| ||| ||| | |||| || || |
Sbjct 640863 ATTCAAAGTATTTTCCCTTTCGTCATTTG---CTCCAGAAATGTTACCCT--TCTGTC-T 640916
Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082
|||||| | |||||||||||| || || || | | | | || | ||| | ||| ||
Sbjct 640917 GGCTTTACCGATAGCATCAATTTCATCTATAAACACAATAGATGGTGCATTCTCTCTTGC 640976
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| || ||||| || | ||| | ||||| || | |||||| ||||||| ||||||||
Sbjct 640977 AGTTTTGAATAAGTCGCGTACTCTTGATGCACCTACACCAACGAACATTTCGACAAATTC 641036
Query 289143 AGAAGCGGATAC 289154
||| | |||||
Sbjct 641037 GGAACCTGATAC 641048
>seq29
Length=1538644
Score = 84.2 bits (92), Expect = 6e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 155591 AGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCA 155650
||| || || ||||| ||||| || || | | ||| |||||||| || ||||| ||
Sbjct 479400 AGATGCGAGGTTACAAACCGCTGTTTCATCCTTTGAGCTATATTCTACGATTTCACAACA 479341
Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710
|||||||| || || || |||||||||||||| || || || || |||| |||
Sbjct 479340 AAGGTTAGATGATTTTATTGTTCCTAAATTCTTCTGATTTGACTTTTCATTGCAAGAATC 479281
Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCC 155741
|||||||| ||| |||| || ||||||
Sbjct 479280 CTTGTATAACATGAATGGTCCACCAGTCTCC 479250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816732547502
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