Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 5e-14 seq41 91.5 2e-13 >seq15 Length=954869 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 || || |||||| ||||| ||| | || ||| ||| | ||| || ||||| Sbjct 129375 GAGCTATTATGGTTTATTTCAGGATGTACCGATGGAAAGAAGTTAGCAGAACAGGGTGTA 129434 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC-TGAAAG 172519 || | ||| | | ||||| ||| | |||| | ||||| || ||| ||| |||||| Sbjct 129435 AAGATATGGGAAGGCAATGGATCTAGGGAATATCTAGATAAATT-GGGACTACATGAAAG 129493 Query 172520 AAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATA 172579 | |||||||||||||| || |||| || ||||||||||| ||| || || | || Sbjct 129494 ACGGGAAGGTGATTTAGGACCTGTTTACGGGTTTCAATGGAGGCATTTTGGAGCAAAGTA 129553 Query 172580 TATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTA 172625 || ||| |||||| ||||||| || |||||||| ||||||||| Sbjct 129554 TA-AGACATGTGATGACGATTACAGTGGCCAAGGAGTTGACCAATTA 129599 >seq41 Length=1599359 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||| ||||| ||| | | ||||| || || || || | || | || |||||| Sbjct 336467 ATTAAAGTTGCACAACTTGCTCCATATGTCGCCGAGCACACGGCCTACCACCACGGTGAA 336526 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 |||| || |||| || ||| | |||||| | ||||||||| ||||||| || Sbjct 336527 CAAACCTTGGCGCAAACCATTATTGGCCTGGCCCAAAACTTTGTTGGTTCAAATAACATC 336586 Query 166070 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCT 166129 |||| ||||| ||||| |||||||||||| | || ||||||||| | || Sbjct 336587 AATCTACTAAAACCTAATGGTGCCTTTGGTACCAGAGCAACCGGTGGTAAAGATGCAGCC 336646 Query 166130 GCATCAAGATATATTTATAC 166149 ||| |||||||||||| ||| Sbjct 336647 GCAGCAAGATATATTTTTAC 336666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489236318480