Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq19 122 7e-23 seq43 109 5e-19 seq15 109 5e-19 >seq19 Length=616425 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| |||||||||||||| || || || ||||||||| | ||| || || Sbjct 593236 AAGATGCAAATTTTTGTCAAAACTTTGACTGGTAAGACCATTACCTTAGAAGTTGAATCT 593177 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || ||| | | | || || ||||| ||||| ||||| | || || Sbjct 593176 TCTGACACTATTGATAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 593117 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| ||||||||| |||| |||| ||||| | | |||||| Sbjct 593116 CAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCTTATCTGATTAC 593057 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| |||||||| |||||| | || || ||| || |||| || Sbjct 593056 AACATCCAAAAGGAATCTACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 593007 >seq43 Length=816610 Score = 109 bits (120), Expect = 5e-19 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCT-- 110329 |||||||||||||||||||| || || || || || ||||| | || ||| ||| Sbjct 809642 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809583 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| |||| | | || ||| || ||| ||||| || || | ||| || Sbjct 809582 GACACCACTGACA---ATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGAC 809526 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || ||| | |||| || |||||||| |||||||||| |||||| || | || || Sbjct 809525 CAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTAT 809466 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || |||||||||||||| || |||||| |||| || ||| |||| || || Sbjct 809465 AATATTCAAAAAGAATCCACATTGCACTTGGTCTTGAGATTGCGTGGTGG 809416 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||||||||| || || || || || ||| | || ||| | Sbjct 809414 ATGCAAATCTTTGTCAAAACTTTGACAGGTAAGACTATCACCCTGGAGGTGGAATCCTCT 809355 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| || ||| ||||| || || | || || || Sbjct 809354 GACACCATTGATAACGTCAAATCTAAAATTCAAGACAAGGAGGGTATTCCACCAGACCAG 809295 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | |||| || |||||||| |||||||||| |||||| || | || || || Sbjct 809294 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809235 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || ||||| |||| |||||| |||| || || Sbjct 809234 ATTCAAAAAGAATCCACACTGCACTTGGTCTTAAGATTGCGTGGTGG 809188 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||||||||| || || || || || ||||| | || ||| | Sbjct 812834 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812775 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || ||| || ||| ||||| || || | || || || Sbjct 812774 GACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCACCAGACCAG 812715 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | |||| || |||||||| |||||||||| |||||| || | || || || Sbjct 812714 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 812655 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || ||||| |||| || ||| |||| || || Sbjct 812654 ATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812608 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 110266 ATTTAAAA--TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 |||||||| ||||||| || || ||||| || || || || || ||||| | || | Sbjct 813071 ATTTAAAACATGCAAATCTTCGTTAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTG 813012 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || | || || | | | | || ||| || ||| ||||| || || | || Sbjct 813011 GAATCCTCGGACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCA 812952 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 || || || ||| | |||| || |||||||| |||||||||| |||||| || | Sbjct 812951 CCAGACCAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCT 812892 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || |||||||||||||| || ||||| |||| || ||| |||| || || Sbjct 812891 GACTATAATATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812836 >seq15 Length=954869 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 || ||||||||||| || || || ||||| || | ||| || || || ||| | Sbjct 83740 TTCGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 83799 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | | || || |||||| ||||||||||| | || || ||||||||| | Sbjct 83800 GACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTA 83859 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | ||| ||||| || |||| |||| ||||| || | || ||||||||||||||| Sbjct 83860 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 83919 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||| |||| || ||| || |||| || Sbjct 83920 GAATCTACTTTACACTTGGTCTTGAGATTGAGAGGTGG 83957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841368550678