Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq19 122 7e-23
seq43 109 5e-19
seq15 109 5e-19
>seq19
Length=616425
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| |||||||| |||||||||||||| || || || ||||||||| | ||| || ||
Sbjct 593236 AAGATGCAAATTTTTGTCAAAACTTTGACTGGTAAGACCATTACCTTAGAAGTTGAATCT 593177
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| ||| | | | || || ||||| ||||| ||||| | || ||
Sbjct 593176 TCTGACACTATTGATAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 593117
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||||||| | || | ||| ||||||||| |||| |||| ||||| | | ||||||
Sbjct 593116 CAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCTTATCTGATTAC 593057
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| |||||||| |||||| | || || ||| || |||| ||
Sbjct 593056 AACATCCAAAAGGAATCTACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 593007
>seq43
Length=816610
Score = 109 bits (120), Expect = 5e-19
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCT-- 110329
|||||||||||||||||||| || || || || || ||||| | || ||| |||
Sbjct 809642 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809583
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| |||| | | || ||| || ||| ||||| || || | ||| ||
Sbjct 809582 GACACCACTGACA---ATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCCCCAGAC 809526
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || ||| | |||| || |||||||| |||||||||| |||||| || | || ||
Sbjct 809525 CAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTAT 809466
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| |||||||||||||| || |||||| |||| || ||| |||| || ||
Sbjct 809465 AATATTCAAAAAGAATCCACATTGCACTTGGTCTTGAGATTGCGTGGTGG 809416
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||||||||| || || || || || ||| | || ||| |
Sbjct 809414 ATGCAAATCTTTGTCAAAACTTTGACAGGTAAGACTATCACCCTGGAGGTGGAATCCTCT 809355
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || ||| || ||| ||||| || || | || || ||
Sbjct 809354 GACACCATTGATAACGTCAAATCTAAAATTCAAGACAAGGAGGGTATTCCACCAGACCAG 809295
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | |||| || |||||||| |||||||||| |||||| || | || || ||
Sbjct 809294 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809235
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||||||||| || ||||| |||| |||||| |||| || ||
Sbjct 809234 ATTCAAAAAGAATCCACACTGCACTTGGTCTTAAGATTGCGTGGTGG 809188
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||||||||| || || || || || ||||| | || ||| |
Sbjct 812834 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812775
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | | || ||| || ||| ||||| || || | || || ||
Sbjct 812774 GACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCACCAGACCAG 812715
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | |||| || |||||||| |||||||||| |||||| || | || || ||
Sbjct 812714 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 812655
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||||||||| || ||||| |||| || ||| |||| || ||
Sbjct 812654 ATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812608
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 110266 ATTTAAAA--TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323
|||||||| ||||||| || || ||||| || || || || || ||||| | || |
Sbjct 813071 ATTTAAAACATGCAAATCTTCGTTAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTG 813012
Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383
|| | || || | | | | || ||| || ||| ||||| || || | ||
Sbjct 813011 GAATCCTCGGACACCATTGACAATGTCAAATCTAAAATTCAGGACAAGGAGGGTATTCCA 812952
Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443
|| || || ||| | |||| || |||||||| |||||||||| |||||| || |
Sbjct 812951 CCAGACCAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCT 812892
Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || |||||||||||||| || ||||| |||| || ||| |||| || ||
Sbjct 812891 GACTATAATATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812836
>seq15
Length=954869
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341
|| ||||||||||| || || || ||||| || | ||| || || || ||| |
Sbjct 83740 TTCGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 83799
Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401
| | | || || |||||| ||||||||||| | || || ||||||||| |
Sbjct 83800 GACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTA 83859
Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461
|| | ||| ||||| || |||| |||| ||||| || | || |||||||||||||||
Sbjct 83860 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 83919
Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || ||| |||| || ||| || |||| ||
Sbjct 83920 GAATCTACTTTACACTTGGTCTTGAGATTGAGAGGTGG 83957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841368550678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |