Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq43 100 2e-16 >seq43 Length=816610 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 34743 AATCATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| | || || | ||| || | ||||| ||| | ||| || || ||||| |||| Sbjct 809180 AATCTTAACCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTAT 809239 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 |||| || || | | |||| |||||||| || || ||||| |||| || ||||||| Sbjct 809240 AGTCAGACAGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGT 809299 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | ||||||||||| | ||||| ||||||| | || | ||| || Sbjct 809300 CTGGTGGAATACCCTCCTTGTCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGG 809359 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||| || ||||| || || | || || |||||||| ||||| Sbjct 809360 ATTCCACCTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| |||| ||||| ||| | ||| || || ||||| |||||||| || Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | |||| |||||||| || || ||||| |||| || ||||||||| | || Sbjct 812896 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812955 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | ||||| |||||| | || | || || || || Sbjct 812956 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 813015 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || || ||||| || || | || || || ||||| |||||| Sbjct 813016 TCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATG 813063 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| |||| ||||| ||| | ||| || || ||||| |||||||| || Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | |||| |||||||| || || ||||| |||| || ||||||||| | || Sbjct 809476 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809535 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGAC 34902 | ||||||||||| | ||||| |||||| Sbjct 809536 ATACCCTCCTTGTCCTGAATTTTAGATTTGAC 809567 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| |||| ||||| ||| | ||| || || ||||| |||||||| || Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | |||| |||||||| || || ||||| |||| || ||||||||| | || Sbjct 812668 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812727 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGAC 34902 | ||||||||||| | ||||| |||||| Sbjct 812728 ATACCCTCCTTGTCCTGAATTTTAGATTTGAC 812759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692617408474