Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq41 100 4e-16 seq15 98.7 1e-15 seq29 84.2 3e-11 >seq41 Length=1599359 Score = 100 bits (110), Expect = 4e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057 ||||| ||||| ||| | | ||||| || || || || | ||| | ||||||||| Sbjct 336467 ATTAAAGTTGCACAACTTGCTCCATATGTCGCCGAGCACACGGCCTACCACCACGGTGAA 336526 Query 163058 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 163117 |||| || |||| || ||| | |||||| | ||||||||| ||||||| || Sbjct 336527 CAAACCTTGGCGCAAACCATTATTGGCCTGGCCCAAAACTTTGTTGGTTCAAATAACATC 336586 Query 163118 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 163177 |||| ||||| ||||| |||||||||||| | || ||||||||| | || Sbjct 336587 AATCTACTAAAACCTAATGGTGCCTTTGGTACCAGAGCAACCGGTGGTAAAGATGCAGCC 336646 Query 163178 GCATCAAGATATATTTATAC 163197 ||| |||||||||||| ||| Sbjct 336647 GCAGCAAGATATATTTTTAC 336666 >seq15 Length=954869 Score = 98.7 bits (108), Expect = 1e-15 Identities = 192/277 (69%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 168481 TCCCACTTCTTACTACCaaaaaaaTTGTATACACTAAC---ATTCTTAAAGAACTTTTAT 168537 ||||||| || || || |||| | |||| |||||| ||| || || || |||| Sbjct 129328 TCCCACTGCTGACAACGAAAAGA---GTATTCACTAAAGGGATTATTTTGGAGCTATTAT 129384 Query 168538 GGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGA 168597 || |||| ||| | || ||| ||| | ||| || ||||| || | ||| Sbjct 129385 GGTTTATTTCAGGATGTACCGATGGAAAGAAGTTAGCAGAACAGGGTGTAAAGATATGGG 129444 Query 168598 ACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACC-GAAAGAAAAGAAGGT 168656 | | ||||| ||| | |||| | ||||| || ||| ||| |||||| |||||| Sbjct 129445 AAGGCAATGGATCTAGGGAATATCTAGATAAAT-TGGGACTACATGAAAGACGGGAAGGT 129503 Query 168657 GATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGAC-TG 168715 |||||||| || |||| || ||||||||||| ||| ||||| | |||| ||| || Sbjct 129504 GATTTAGGACCTGTTTACGGGTTTCAATGGAGGCATTTTGGAGCAAAGTATA-AGACATG 129562 Query 168716 TGATACAGATTACACCGGACAAGGAGTAGACCAATTA 168752 |||| ||||||| || |||||||| ||||||||| Sbjct 129563 TGATGACGATTACAGTGGCCAAGGAGTTGACCAATTA 129599 >seq29 Length=1538644 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 193445 ACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATGA 193503 ||| ||| | || || ||||| | || || |||||| ||||||| ||||||||| | Sbjct 469995 ACCAGAACTGGGTGACAAATTCTCCTCTAGACATGGCC-AAAAAGGTGTTTGTGGTATTA 470053 Query 193504 TTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTA 193563 || | |||||||||||||||||| | | | |||||| || || ||||| || || | Sbjct 470054 TTGTTAAACAAGAAGATATGCCATTCAATGATCAAGGTATTGTCCCCGATATCATCATGA 470113 Query 193564 ATCCAAATTGTATTCCATCCAGAATGAC 193591 |||| || || | |||||| | ||||| Sbjct 470114 ATCCGCATGGTTTCCCATCCCGTATGAC 470141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177234772880