Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq41 100 3e-16 seq43 91.5 1e-13 seq15 91.5 1e-13 seq19 89.7 5e-13 >seq41 Length=1599359 Score = 100 bits (110), Expect = 3e-16 Identities = 273/417 (65%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256 |||| ||| ||||||||||||| | |||| | || |||||| | | ||||| Sbjct 1219200 TCAATGCTATCGATAATATTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGA 1219141 Query 50257 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50316 | || | | || | ||| || ||| | ||||| || ||||| | |||||||| Sbjct 1219140 TTCAAGATAGCAATGCAATTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTA 1219081 Query 50317 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCG 50376 | || || || ||| |||||| || || |||| | || | || ||||||| | Sbjct 1219080 TTTTCTTCTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTG 1219021 Query 50377 GCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGT 50436 | | || ||| || |||||||||| | || ||||| | || ||||| ||||| | Sbjct 1219020 GTTTGACCTTTTCAAATGAGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCTT 1218961 Query 50437 GTTTGTACTACAATACGCGCGTAAATGAAAAAT-TATCATACGAAACAATTTTGG---AC 50492 |||||| || ||| | |||||||| | || | | ||||| | | | Sbjct 1218960 GTTTGT-------TATTCGCTCATTTGAAAAATAAACCAGAACCATCAATTATAGAAAAG 1218908 Query 50493 ATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCA 50552 || ||| ||||| || || || |||||| | ||||| ||| ||||| || || | Sbjct 1218907 ATTATCACCGAAGCTGTTGAAATTGAAAAAAGATATTTCATGGATGCTTTGCCAGTATCG 1218848 Query 50553 TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA 50609 || ||||| ||||| || || | ||| | | ||| |||| ||||| || || ||| Sbjct 1218847 TTATTGGGTATGAATGCCGATCTAATGAACCAATACGTTGAATTTGTCGCTGATAGA 1218791 >seq43 Length=816610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || || | ||| || || || | ||| ||||||||||| || || || || | Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || || || |||||||||||||| | |||| | ||||| || || || Sbjct 812668 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812727 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| |||||| ||| | | || | ||||| | || ||| || Sbjct 812728 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 812787 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | ||||| || ||||| ||||| || |||||||||||| Sbjct 812788 TCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCATA 812835 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || || | ||| || || || | ||| ||||||||||| || || || || | Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || || || |||||||||||||| | |||| | ||||| || || || Sbjct 812896 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 812955 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| |||||| ||| | | || | ||||| | || ||| || Sbjct 812956 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACC 813015 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || ||||| ||||| ||||| |||||||| Sbjct 813016 TCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCAT 813062 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || || | ||| || || || | ||| ||||||||||| || || || || | Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || || || |||||||||||||| | |||| | ||||| || || || Sbjct 809476 AGAGTTCTGCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 809535 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| |||||| ||| | | || ||||| | || ||| || Sbjct 809536 ATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAGTGGTGTCCGAGGATTCCACC 809595 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | ||||| || ||||| ||||| || |||||||||||| Sbjct 809596 TCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCATA 809643 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259 || || || || | ||| ||||||||||| || || || || || || || || Sbjct 809203 AAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCC 809262 Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 || |||||||||||||| | |||| | ||||| || || || || || || ||||| Sbjct 809263 TCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 809322 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 |||||| ||| | | || | ||||| | || ||| || || | || | ||| Sbjct 809323 TGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGTC 809382 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || ||||| ||||| || || ||||||||| Sbjct 809383 TTACCTGTCAAAGTTTTGACAAAGATTTGCATA 809415 >seq15 Length=954869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| || || || | |||||||||||||| |||||||| || | Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | ||| ||||||||| |||| | | ||| || || || || Sbjct 83897 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 83838 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 83837 ATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 83778 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | ||| | ||||| || ||||| ||||| ||||| Sbjct 83777 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAA 83740 >seq19 Length=616425 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| ||||| || | |||||||| ||||| ||||||||||| Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGAT 593066 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | |||||||||||| |||||| | ||| || || || || Sbjct 593067 AAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 593126 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || || || | | || | ||||| | | ||| ||| Sbjct 593127 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAACT 593186 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || ||||| ||||| || || |||||||| Sbjct 593187 TCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCAT 593233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543719087200