Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq27 203 8e-47
seq41 199 9e-46
seq43 113 1e-19
seq29 100 7e-16
seq17 95.1 3e-14
>seq27
Length=921605
Score = 203 bits (224), Expect = 8e-47
Identities = 469/697 (67%), Gaps = 25/697 (4%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| ||||| || || || | |||||| ||||| | || | ||||| ||| |
Sbjct 395945 ACTACTTTGGATTTAAGACATTGGAACGTTCTTATCTGCTGAGGACGAATGGTGAGGTTG 395886
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGG-ACATGATATT 110420
||||||||||||||| | | | | || | ||||||| ||||| ||| |||||
Sbjct 395885 CTGAACGTCCTCAACATTTAATCATGAGAGTATCAGTTGGTATCCATGGTACA-GATATC 395827
Query 110421 AAAGCTGTTATTGAATGTTA-----TGATGTAT-TAAGTAAAAAGAAAGCTATTCATGCT 110474
|| | ||||| ||| ||| |||||| | |||| | | || |||||
Sbjct 395826 AAGTCCGTTATAGAAACTTACAACTTGATGTCTCTAAG------GTATTTCATCCATGCA 395773
Query 110475 ACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-T 110533
|||| || |||| ||||| || ||| | |||| || |||| || |||||| |
Sbjct 395772 TCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTCTTCATG-TTTCTTAGT 395714
Query 110534 AGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTAT 110593
|| || || || |||||||||||||| ||||||||| | | || ||| |||| | ||
Sbjct 395713 AGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAAGGAATGTGCTATGAT 395654
Query 110594 TTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAA 110653
||| |||| |||| || ||||| | || | ||| | ||||| || | || | |
Sbjct 395653 TTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCGTTCTACCGGTTCCTA 395594
Query 110654 TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713
|| ||| | || ||| | || | || | | || ||| | ||||||| ||| |
Sbjct 395593 CATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGATTCGAGTCTTTAACAA 395534
Query 110714 CACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCT 110770
||||| ||||| | ||||||||||| | || ||| | |||||| | || ||
Sbjct 395533 TACTGCTCGTTATGTCGACCAAGGTGGTAACAAAAGACCAGGCGCTTTTGCTTTATACCT 395474
Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830
||||| |||||| |||| || || || ||| | || || | |||||||| || ||
Sbjct 395473 TGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAAAAAATCACGGTAAGGA 395414
Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890
|||| | || | ||||||||| ||| | |||||| | |||||||||||||||||
Sbjct 395413 AGAAATTCGTGCCAGAGATTTATTTCCAGCACTTTGGATTCCTGATTTATTCATGAAACG 395354
Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGT---TCTCCTGGTCTATC 110947
||| |||||||| || |||| | || ||| | ||| || | || ||| || |
Sbjct 395353 TGTCCAAGAAAACGGTGAGTGGAC-CT--TGTTTTCTCCAAGTGAAGCGCCAGGTTTAGC 395297
Query 110948 TGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984
|||||| |||| ||||||| ||||| | ||||||
Sbjct 395296 TGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAA 395260
Score = 116 bits (128), Expect = 9e-21
Identities = 313/470 (67%), Gaps = 19/470 (4%)
Strand=Plus/Minus
Query 112981 TTATGAAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTG 113040
||| | ||||||| | | || |||||||| |||||||||||||| || || || ||
Sbjct 394598 TTAAGGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAACAT 394539
Query 113041 CACAGATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGAC 113100
| || ||| | || |||||||||||||||||||| | || || || ||| ||| |
Sbjct 394538 CTCAAATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTATTCCCGTC 394479
Query 113101 GTGTTCTAGCAGGTGAGTTTGTACTTTGTAATAAATATCTGCAAGAAGAACTTCTCGGAA 113160
||||| | | ||||| ||| | | |||| ||| || | || | | |
Sbjct 394478 GTGTTTTGTCTGGTGAATTTCAAATCGTTAATCCGTATTTGTTACGTGATTTGGTTGATT 394419
Query 113161 TCGGTAAATGGAACAATGAAGTGAAAAACTCCATTATTGCTAATCAAGGTTCGGTTCAAC 113220
| || | |||| | || ||||| | ||| || | | | ||||| |||||
Sbjct 394418 TGGGGATATGGGATGATAGTATGAAACAACACATCATCACAGACAATGGTTCTATTCAAA 394359
Query 113221 ATCTA---AAATTGCCTGATTGCGTGAAAGATGTATTTAAGACTATTTGGGAAAT---TA 113274
||||| || | ||| | ||||||| ||| |||||| | ||||||||
Sbjct 394358 ATCTACCTAACATTCCTCAGGAATTGAAAGAGCTATACAAGACTGTGTGGGAAATCTCAC 394299
Query 113275 AGCAACGTGTCGTAATTGATATGGCTGCAGATCGTGGCAAGTTTATCGATCAATCTCAGT 113334
| ||| | || ||||| ||||| || || |||| ||||||||||||||||| |
Sbjct 394298 AAAAACATATC---ATTGAAATGGCAGCTGACCGTGCTGCTTTTATCGATCAATCTCACT 394242
Query 113335 CGATGAACTTATTTAT-GCCGGACACCTCACCA--GATAAGGTGAC--ATCTGCTCTATT 113389
| |||| |||| || ||| |||| || | | |||| |||| | ||| | ||
Sbjct 394241 CCTTGAA--TATTCATATCCGTGCACC-AACGATGGGTAAGTTGACCAGTATGCAC--TT 394187
Query 113390 TTACGGCTGGAAAAAAGGTTTAAAAACAGGTATGTATTATTTGCGAACAC 113439
|||||| ||||| | || || ||||||||||||||||| || ||||||
Sbjct 394186 TTACGGTTGGAAGATGGGATTGAAAACAGGTATGTATTACCTGAGAACAC 394137
>seq41
Length=1599359
Score = 199 bits (220), Expect = 9e-46
Identities = 508/756 (67%), Gaps = 23/756 (3%)
Strand=Plus/Minus
Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492
|||||||||| ||| |||| || ||| | || |||| | | | || | || |
Sbjct 1219539 TATTTCCAATCAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGAAGCTTCTTTTT 1219480
Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAA---ATTAACCT 131549
|||||| |||||| |||||| | | || ||||| |||||||| | || | | | |
Sbjct 1219479 GGACTGCTGAAGAAATCGATCTTTCAAAGGATATACATGATTGGAATAATAGAATGAACG 1219420
Query 131550 TGAATGAAAAAGATTTTGTTTCCAAAGTTCTTG-CATTCTTCGCCGGAAGTGATGGCATT 131608
|||||||| | ||| |||| || | ||||| |||| ||||||| |||||| ||
Sbjct 1219419 AGAATGAAAGATTTTTCATTTC-AAGGGTCTTGGCATTTTTCGCCGCTTCTGATGGTATC 1219361
Query 131609 GTTATTGAAAATCTTGTTATTAATTTCATTCA--AGAAATTGATATTCCTGAAGTAACAT 131666
|||| ||||||| | || |||||| ||| |||| || | |||||||||| | |
Sbjct 1219360 GTTAATGAAAATTTGGTAGAGAATTTC--TCAGCAGAAGTTCAAATTCCTGAAGCCAAGT 1219303
Query 131667 CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGA 131726
|| || |||||| | ||| ||||||| |||| || || ||| |||
Sbjct 1219302 GTTTTTATGGGTTTCAAATTATGATGGAAAATATTCATTCTGAGACTTACTCTTTACTGA 1219243
Query 131727 TTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAAT 131786
| || | | | | ||| | | | || | || || || ||||| | ||||
Sbjct 1219242 TCGATACTTATATCAAAGACCCAAAGGAAAGTGATTTCTTGTTCAATGCTATCGATAATA 1219183
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
|||| ||||||| | |||||||||||||| |||| ||||||||||||| || |
Sbjct 1219182 TTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGATTCAAGATAGCAATGCAA 1219123
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
||| || |||| | || || |||||| |||||||||| ||||| || ||| | |
Sbjct 1219122 TTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTATTTTCTTCTCTGGTTCCT 1219063
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
| ||||||||||||| | |||||| || || |||||||| | | || || |||
Sbjct 1219062 TTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTGGTTTGACCTTTTCAAATG 1219003
Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAAT 132026
| || || | |||||||||| || ||||| || |||||| | || | | | ||
Sbjct 1219002 AGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCT-TGTTTGTTATTCGCTCAT 1218944
Query 132027 TTG-CTGATAAACTTGATGAA--AATAATATTAAACAACTTATAAGCGAAGCAGTTGATA 132083
||| |||||| || | ||| ||| ||| | |||| | |||||| ||||| |
Sbjct 1218943 TTGAAAAATAAACCAGAACCATCAATTATAGAAAAGA--TTATCACCGAAGCTGTTGAAA 1218886
Query 132084 TCGAGAAGGAGTTTATTACA--GAAGCTTTGCCTTGCAATTTGATTGGG-ATGAATGCTG 132140
| || || | |||| || || |||||||| | | | |||||| |||||||| |
Sbjct 1218885 TTGAAAA--AAGATATTTCATGGATGCTTTGCC-AGTATCGTTATTGGGTATGAATGCCG 1218829
Query 132141 ACTCT-ATGAAGGAGTACATTGAATTCGTTGCTGAT 132175
| ||| ||||| | ||| ||||||| || ||||||
Sbjct 1218828 A-TCTAATGAACCAATACGTTGAATTTGTCGCTGAT 1218794
>seq43
Length=816610
Score = 113 bits (124), Expect = 1e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
||||||||| || |||||||| | ||||| || | |||||||||||||||||||||
Sbjct 326737 GACAATGATCCTGTGCTGTTCAACCGTCAACCTTCTTTACATAAAATGTCTATGATGGCT 326796
Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCT 305437
|||| || ||||| | | | || ||| ||||||| || | | | ||
Sbjct 326797 CATAGGGTTAAAGTTATGCCATACTCTACTTTTAGATTAAACCTATCAGTTACCTCTCCG 326856
Query 305438 TATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACA 305497
|||||||| ||||||||||| || ||||||||| ||||||| || || || ||| |||
Sbjct 326857 TATAATGCAGATTTTGATGGTGACGAAATGAATTTGCATGTTCCACAGTCTGAGGAAACA 326916
Query 305498 ATGACTGAATTATCA 305512
| | |||||||||
Sbjct 326917 AGAGCCGAATTATCA 326931
Score = 84.2 bits (92), Expect = 5e-11
Identities = 212/320 (66%), Gaps = 2/320 (1%)
Strand=Plus/Plus
Query 304887 TACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTC 304946
|||| | |||| | ||||| | |||||||| || || || ||| || || |
Sbjct 326312 TACAGTTTCATGTGGCAACTTACATGGATAACGATATAGCGGGACAACCACAAGCGCTGC 326371
Query 304947 AAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTA 305006
| | |||||| | || |||| |||| | |||| | ||||| || ||||||||||
Sbjct 326372 AGAAATCTGGTCGTCCAGTAAAATCTATTCGTGCACGCTTAAAAGGAAAGGAGGGTCGTA 326431
Query 305007 TTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTG 305066
| |||| || | ||||| || |||||||| ||| ||||||| ||| || | ||
Sbjct 326432 TCAGAGGCAACTTGATGGGTAAGCGTGTTGACTTTTCAGCAAGAACTGTCATTTCTGGTG 326491
Query 305067 ATTCTCAAATTAG-TCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACA 305125
| || ||| |||| || || || | |||||||||| ||||| || ||| ||
Sbjct 326492 A-TCCCAACTTAGAGCTGGATCAAGTGGGAGTTCCAAAATCGATTGCAAAAACACTTACC 326550
Query 305126 TTTCCAGAGAAAGTTAACGAGAAAAATATTAAACATTTGAGACGTTGTGTTCTTAATGGA 305185
| ||||||| ||||| | | |||||| | | ||| | || || ||| ||| ||
Sbjct 326551 TATCCAGAGGTAGTTACCCCATATAATATTGATCGTTTAACACTTTTAATTCGTAACGGT 326610
Query 305186 AATAGCAAGTATCCAGGTGC 305205
|| || | ||||||||
Sbjct 326611 CCTAATGAGCACCCAGGTGC 326630
>seq29
Length=1538644
Score = 100 bits (110), Expect = 7e-16
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 167631 GTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCA 167690
|||| ||| ||| | ||| ||||||| | || || | ||| ||||||||||||
Sbjct 755383 GTGTTGAAAGTATCAACGAATATTTTCCATGTCTTGATATTGCAACGACGTTTGCATTCA 755442
Query 167691 TCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATT 167750
|| ||||||||||| |||| | | || |||||||||||||||||| |||| ||| |
Sbjct 755443 TCATAAAAACCATAAACTCTCGTAACATTAGCACATTCGTGATTTCCCCTTAGTAAGAAA 755502
Query 167751 ATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTA 167810
| || | | |||| || | |||||| || |||||||| | ||||
Sbjct 755503 AAATTCTCTGGATATTTGATTTTGTAACAGAGTAATAATAATATTGTTTCCAGCGATTGT 755562
Query 167811 ACACCTCTATCAACATAATCACCTAAAAA 167839
||| | ||| |||||||| ||||||||
Sbjct 755563 TTACCACGATCGACATAATCTCCTAAAAA 755591
>seq17
Length=1402967
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 305414 TTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATG 305473
||||||| | ||| ||||||||| |||||||||||||||||||| |||||||||||| |
Sbjct 801229 TTAAATGAATGTGTTTGTACGCCATATAATGCGGATTTTGATGGTGATGAAATGAATCTA 801170
Query 305474 CATGTACCTCAA 305485
||||| ||||||
Sbjct 801169 CATGTGCCTCAA 801158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812100522206
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