Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq27 203 8e-47 seq41 199 9e-46 seq43 113 1e-19 seq29 100 7e-16 seq17 95.1 3e-14 >seq27 Length=921605 Score = 203 bits (224), Expect = 8e-47 Identities = 469/697 (67%), Gaps = 25/697 (4%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||| || || || | |||||| ||||| | || | ||||| ||| | Sbjct 395945 ACTACTTTGGATTTAAGACATTGGAACGTTCTTATCTGCTGAGGACGAATGGTGAGGTTG 395886 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGG-ACATGATATT 110420 ||||||||||||||| | | | | || | ||||||| ||||| ||| ||||| Sbjct 395885 CTGAACGTCCTCAACATTTAATCATGAGAGTATCAGTTGGTATCCATGGTACA-GATATC 395827 Query 110421 AAAGCTGTTATTGAATGTTA-----TGATGTAT-TAAGTAAAAAGAAAGCTATTCATGCT 110474 || | ||||| ||| ||| |||||| | |||| | | || ||||| Sbjct 395826 AAGTCCGTTATAGAAACTTACAACTTGATGTCTCTAAG------GTATTTCATCCATGCA 395773 Query 110475 ACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-T 110533 |||| || |||| ||||| || ||| | |||| || |||| || |||||| | Sbjct 395772 TCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTCTTCATG-TTTCTTAGT 395714 Query 110534 AGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTAT 110593 || || || || |||||||||||||| ||||||||| | | || ||| |||| | || Sbjct 395713 AGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAAGGAATGTGCTATGAT 395654 Query 110594 TTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAA 110653 ||| |||| |||| || ||||| | || | ||| | ||||| || | || | | Sbjct 395653 TTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCGTTCTACCGGTTCCTA 395594 Query 110654 TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713 || ||| | || ||| | || | || | | || ||| | ||||||| ||| | Sbjct 395593 CATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGATTCGAGTCTTTAACAA 395534 Query 110714 CACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCT 110770 ||||| ||||| | ||||||||||| | || ||| | |||||| | || || Sbjct 395533 TACTGCTCGTTATGTCGACCAAGGTGGTAACAAAAGACCAGGCGCTTTTGCTTTATACCT 395474 Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830 ||||| |||||| |||| || || || ||| | || || | |||||||| || || Sbjct 395473 TGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAAAAAATCACGGTAAGGA 395414 Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890 |||| | || | ||||||||| ||| | |||||| | ||||||||||||||||| Sbjct 395413 AGAAATTCGTGCCAGAGATTTATTTCCAGCACTTTGGATTCCTGATTTATTCATGAAACG 395354 Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGT---TCTCCTGGTCTATC 110947 ||| |||||||| || |||| | || ||| | ||| || | || ||| || | Sbjct 395353 TGTCCAAGAAAACGGTGAGTGGAC-CT--TGTTTTCTCCAAGTGAAGCGCCAGGTTTAGC 395297 Query 110948 TGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 |||||| |||| ||||||| ||||| | |||||| Sbjct 395296 TGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAA 395260 Score = 116 bits (128), Expect = 9e-21 Identities = 313/470 (67%), Gaps = 19/470 (4%) Strand=Plus/Minus Query 112981 TTATGAAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTG 113040 ||| | ||||||| | | || |||||||| |||||||||||||| || || || || Sbjct 394598 TTAAGGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAACAT 394539 Query 113041 CACAGATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGAC 113100 | || ||| | || |||||||||||||||||||| | || || || ||| ||| | Sbjct 394538 CTCAAATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTATTCCCGTC 394479 Query 113101 GTGTTCTAGCAGGTGAGTTTGTACTTTGTAATAAATATCTGCAAGAAGAACTTCTCGGAA 113160 ||||| | | ||||| ||| | | |||| ||| || | || | | | Sbjct 394478 GTGTTTTGTCTGGTGAATTTCAAATCGTTAATCCGTATTTGTTACGTGATTTGGTTGATT 394419 Query 113161 TCGGTAAATGGAACAATGAAGTGAAAAACTCCATTATTGCTAATCAAGGTTCGGTTCAAC 113220 | || | |||| | || ||||| | ||| || | | | ||||| ||||| Sbjct 394418 TGGGGATATGGGATGATAGTATGAAACAACACATCATCACAGACAATGGTTCTATTCAAA 394359 Query 113221 ATCTA---AAATTGCCTGATTGCGTGAAAGATGTATTTAAGACTATTTGGGAAAT---TA 113274 ||||| || | ||| | ||||||| ||| |||||| | |||||||| Sbjct 394358 ATCTACCTAACATTCCTCAGGAATTGAAAGAGCTATACAAGACTGTGTGGGAAATCTCAC 394299 Query 113275 AGCAACGTGTCGTAATTGATATGGCTGCAGATCGTGGCAAGTTTATCGATCAATCTCAGT 113334 | ||| | || ||||| ||||| || || |||| ||||||||||||||||| | Sbjct 394298 AAAAACATATC---ATTGAAATGGCAGCTGACCGTGCTGCTTTTATCGATCAATCTCACT 394242 Query 113335 CGATGAACTTATTTAT-GCCGGACACCTCACCA--GATAAGGTGAC--ATCTGCTCTATT 113389 | |||| |||| || ||| |||| || | | |||| |||| | ||| | || Sbjct 394241 CCTTGAA--TATTCATATCCGTGCACC-AACGATGGGTAAGTTGACCAGTATGCAC--TT 394187 Query 113390 TTACGGCTGGAAAAAAGGTTTAAAAACAGGTATGTATTATTTGCGAACAC 113439 |||||| ||||| | || || ||||||||||||||||| || |||||| Sbjct 394186 TTACGGTTGGAAGATGGGATTGAAAACAGGTATGTATTACCTGAGAACAC 394137 >seq41 Length=1599359 Score = 199 bits (220), Expect = 9e-46 Identities = 508/756 (67%), Gaps = 23/756 (3%) Strand=Plus/Minus Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492 |||||||||| ||| |||| || ||| | || |||| | | | || | || | Sbjct 1219539 TATTTCCAATCAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGAAGCTTCTTTTT 1219480 Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAA---ATTAACCT 131549 |||||| |||||| |||||| | | || ||||| |||||||| | || | | | | Sbjct 1219479 GGACTGCTGAAGAAATCGATCTTTCAAAGGATATACATGATTGGAATAATAGAATGAACG 1219420 Query 131550 TGAATGAAAAAGATTTTGTTTCCAAAGTTCTTG-CATTCTTCGCCGGAAGTGATGGCATT 131608 |||||||| | ||| |||| || | ||||| |||| ||||||| |||||| || Sbjct 1219419 AGAATGAAAGATTTTTCATTTC-AAGGGTCTTGGCATTTTTCGCCGCTTCTGATGGTATC 1219361 Query 131609 GTTATTGAAAATCTTGTTATTAATTTCATTCA--AGAAATTGATATTCCTGAAGTAACAT 131666 |||| ||||||| | || |||||| ||| |||| || | |||||||||| | | Sbjct 1219360 GTTAATGAAAATTTGGTAGAGAATTTC--TCAGCAGAAGTTCAAATTCCTGAAGCCAAGT 1219303 Query 131667 CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGA 131726 || || |||||| | ||| ||||||| |||| || || ||| ||| Sbjct 1219302 GTTTTTATGGGTTTCAAATTATGATGGAAAATATTCATTCTGAGACTTACTCTTTACTGA 1219243 Query 131727 TTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAAT 131786 | || | | | | ||| | | | || | || || || ||||| | |||| Sbjct 1219242 TCGATACTTATATCAAAGACCCAAAGGAAAGTGATTTCTTGTTCAATGCTATCGATAATA 1219183 Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 |||| ||||||| | |||||||||||||| |||| ||||||||||||| || | Sbjct 1219182 TTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGATTCAAGATAGCAATGCAA 1219123 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 ||| || |||| | || || |||||| |||||||||| ||||| || ||| | | Sbjct 1219122 TTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTATTTTCTTCTCTGGTTCCT 1219063 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 | ||||||||||||| | |||||| || || |||||||| | | || || ||| Sbjct 1219062 TTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTGGTTTGACCTTTTCAAATG 1219003 Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAAT 132026 | || || | |||||||||| || ||||| || |||||| | || | | | || Sbjct 1219002 AGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCT-TGTTTGTTATTCGCTCAT 1218944 Query 132027 TTG-CTGATAAACTTGATGAA--AATAATATTAAACAACTTATAAGCGAAGCAGTTGATA 132083 ||| |||||| || | ||| ||| ||| | |||| | |||||| ||||| | Sbjct 1218943 TTGAAAAATAAACCAGAACCATCAATTATAGAAAAGA--TTATCACCGAAGCTGTTGAAA 1218886 Query 132084 TCGAGAAGGAGTTTATTACA--GAAGCTTTGCCTTGCAATTTGATTGGG-ATGAATGCTG 132140 | || || | |||| || || |||||||| | | | |||||| |||||||| | Sbjct 1218885 TTGAAAA--AAGATATTTCATGGATGCTTTGCC-AGTATCGTTATTGGGTATGAATGCCG 1218829 Query 132141 ACTCT-ATGAAGGAGTACATTGAATTCGTTGCTGAT 132175 | ||| ||||| | ||| ||||||| || |||||| Sbjct 1218828 A-TCTAATGAACCAATACGTTGAATTTGTCGCTGAT 1218794 >seq43 Length=816610 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 ||||||||| || |||||||| | ||||| || | ||||||||||||||||||||| Sbjct 326737 GACAATGATCCTGTGCTGTTCAACCGTCAACCTTCTTTACATAAAATGTCTATGATGGCT 326796 Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCT 305437 |||| || ||||| | | | || ||| ||||||| || | | | || Sbjct 326797 CATAGGGTTAAAGTTATGCCATACTCTACTTTTAGATTAAACCTATCAGTTACCTCTCCG 326856 Query 305438 TATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACA 305497 |||||||| ||||||||||| || ||||||||| ||||||| || || || ||| ||| Sbjct 326857 TATAATGCAGATTTTGATGGTGACGAAATGAATTTGCATGTTCCACAGTCTGAGGAAACA 326916 Query 305498 ATGACTGAATTATCA 305512 | | ||||||||| Sbjct 326917 AGAGCCGAATTATCA 326931 Score = 84.2 bits (92), Expect = 5e-11 Identities = 212/320 (66%), Gaps = 2/320 (1%) Strand=Plus/Plus Query 304887 TACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTC 304946 |||| | |||| | ||||| | |||||||| || || || ||| || || | Sbjct 326312 TACAGTTTCATGTGGCAACTTACATGGATAACGATATAGCGGGACAACCACAAGCGCTGC 326371 Query 304947 AAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTA 305006 | | |||||| | || |||| |||| | |||| | ||||| || |||||||||| Sbjct 326372 AGAAATCTGGTCGTCCAGTAAAATCTATTCGTGCACGCTTAAAAGGAAAGGAGGGTCGTA 326431 Query 305007 TTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTG 305066 | |||| || | ||||| || |||||||| ||| ||||||| ||| || | || Sbjct 326432 TCAGAGGCAACTTGATGGGTAAGCGTGTTGACTTTTCAGCAAGAACTGTCATTTCTGGTG 326491 Query 305067 ATTCTCAAATTAG-TCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACA 305125 | || ||| |||| || || || | |||||||||| ||||| || ||| || Sbjct 326492 A-TCCCAACTTAGAGCTGGATCAAGTGGGAGTTCCAAAATCGATTGCAAAAACACTTACC 326550 Query 305126 TTTCCAGAGAAAGTTAACGAGAAAAATATTAAACATTTGAGACGTTGTGTTCTTAATGGA 305185 | ||||||| ||||| | | |||||| | | ||| | || || ||| ||| || Sbjct 326551 TATCCAGAGGTAGTTACCCCATATAATATTGATCGTTTAACACTTTTAATTCGTAACGGT 326610 Query 305186 AATAGCAAGTATCCAGGTGC 305205 || || | |||||||| Sbjct 326611 CCTAATGAGCACCCAGGTGC 326630 >seq29 Length=1538644 Score = 100 bits (110), Expect = 7e-16 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 167631 GTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCA 167690 |||| ||| ||| | ||| ||||||| | || || | ||| |||||||||||| Sbjct 755383 GTGTTGAAAGTATCAACGAATATTTTCCATGTCTTGATATTGCAACGACGTTTGCATTCA 755442 Query 167691 TCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATT 167750 || ||||||||||| |||| | | || |||||||||||||||||| |||| ||| | Sbjct 755443 TCATAAAAACCATAAACTCTCGTAACATTAGCACATTCGTGATTTCCCCTTAGTAAGAAA 755502 Query 167751 ATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTA 167810 | || | | |||| || | |||||| || |||||||| | |||| Sbjct 755503 AAATTCTCTGGATATTTGATTTTGTAACAGAGTAATAATAATATTGTTTCCAGCGATTGT 755562 Query 167811 ACACCTCTATCAACATAATCACCTAAAAA 167839 ||| | ||| |||||||| |||||||| Sbjct 755563 TTACCACGATCGACATAATCTCCTAAAAA 755591 >seq17 Length=1402967 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 305414 TTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATG 305473 ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||||||| | Sbjct 801229 TTAAATGAATGTGTTTGTACGCCATATAATGCGGATTTTGATGGTGATGAAATGAATCTA 801170 Query 305474 CATGTACCTCAA 305485 ||||| |||||| Sbjct 801169 CATGTGCCTCAA 801158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812100522206