Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq43 132 5e-26
seq19 114 1e-20
seq15 114 1e-20
>seq43
Length=816610
Score = 132 bits (146), Expect = 5e-26
Identities = 163/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAG 134556
|| ||| || | ||| || |||||||| |||||||| || ||||| | || | | ||
Sbjct 812847 TCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCC 812906
Query 134557 AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
| || || || ||||| || || |||||||| | |||||| || || || || || || |
Sbjct 812907 A-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCT 812965
Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676
| || |||||||| |||||| ||| | ||||| || |||||||| || | ||||
Sbjct 812966 TGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACCTCCAACGTAA 813025
Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
| || ||||| || || ||||||||||| |||||||| ||
Sbjct 813026 TAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATGTT 813065
Score = 125 bits (138), Expect = 7e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTC 134560
|| || | ||| || |||||||| |||||||| || ||||| | || | | || | ||
Sbjct 809203 AAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCA-TC 809261
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| || ||||| || || |||||||| | |||||| || || || || || || || ||
Sbjct 809262 CTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 809321
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680
||||||||| |||||| || | ||||| || |||||||| || || || || ||
Sbjct 809322 TTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGT 809381
Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || |||||||| || || ||||||||
Sbjct 809382 CTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414
>seq19
Length=616425
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| | || ||||||||||| |||||||| ||
Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGAT 593066
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || | |||||| || ||||| ||||| | || || || || ||
Sbjct 593067 AAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 593126
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || ||||| || | ||||| || ||||| ||
Sbjct 593127 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAACT 593186
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | |||||||| ||||| || |||||||| || ||||||||||| |||
Sbjct 593187 TCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATCTTG 593237
>seq15
Length=954869
Score = 114 bits (126), Expect = 1e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||||| || ||||| ||||||||||||||||| | |
Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || ||||| || || | || || || || ||
Sbjct 83897 AAAGTTCT-ACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 83839
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 83838 GATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 83779
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || |||||||| ||||||
Sbjct 83778 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAAA 83739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398109395920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |