Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq43 132 5e-26 seq19 114 1e-20 seq15 114 1e-20 >seq43 Length=816610 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAG 134556 || ||| || | ||| || |||||||| |||||||| || ||||| | || | | || Sbjct 812847 TCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCC 812906 Query 134557 AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616 | || || || ||||| || || |||||||| | |||||| || || || || || || | Sbjct 812907 A-TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCT 812965 Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676 | || |||||||| |||||| ||| | ||||| || |||||||| || | |||| Sbjct 812966 TGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACCTCCAACGTAA 813025 Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | || ||||| || || ||||||||||| |||||||| || Sbjct 813026 TAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCATGTT 813065 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTC 134560 || || | ||| || |||||||| |||||||| || ||||| | || | | || | || Sbjct 809203 AAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCA-TC 809261 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || || ||||| || || |||||||| | |||||| || || || || || || || || Sbjct 809262 CTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 809321 Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680 ||||||||| |||||| || | ||||| || |||||||| || || || || || Sbjct 809322 TTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGT 809381 Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || |||||||| || || |||||||| Sbjct 809382 CTTACCTGTCAAAGTTTTGACAAAGATTTGCAT 809414 >seq19 Length=616425 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| | || ||||||||||| |||||||| || Sbjct 593007 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGAT 593066 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | |||||| || ||||| ||||| | || || || || || Sbjct 593067 AAGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 593126 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| || | ||||| || ||||| || Sbjct 593127 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAACT 593186 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | |||||||| ||||| || |||||||| || ||||||||||| ||| Sbjct 593187 TCTAAGGTAATGGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATCTTG 593237 >seq15 Length=954869 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||||| || ||||| ||||||||||||||||| | | Sbjct 83957 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 83898 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| || || | || || || || || Sbjct 83897 AAAGTTCT-ACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 83839 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || ||||| ||| | ||||| || ||||| || Sbjct 83838 GATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 83779 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || |||||||| |||||| Sbjct 83778 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACGAAA 83739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398109395920