Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq27 547 9e-151 seq41 322 7e-83 >seq27 Length=921605 Score = 547 bits (606), Expect = 9e-151 Identities = 1506/2290 (66%), Gaps = 47/2290 (2%) Strand=Plus/Plus Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 |||||| | ||| || ||||| | || || || | || ||| | || || |||||||| Sbjct 394099 CTTATCAATTGTGAATTGAATAGCTGCAGAAGCTGCTTGTGTTCTCAGGTAATACATACC 394158 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 ||||||| || | |||| ||||| || |||||||| || | || |||| Sbjct 394159 TGTTTTCAATCCCATCTTCCAACCGTAAAAGTGCATACTGGTCAACTTACCCATCGTTGG 394218 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 | ||||||||||||| || ||| ||||||||| ||||| | | || || || Sbjct 394219 TGCACGGATATGAATATTCAAGGAGTGAGATTGATCGATAAAAGCAGCACGGTCAGCTGC 394278 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 ||||| || ||| ||||| | |||||||| | |||||| | | || ||| | || Sbjct 394279 CATTTCAATGATATGTTTTTGTGAGATTTCCCACACAGTCTTGTATAGCTCTTTCAATTC 394338 Query 68604 ATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660 | |||| | | | ||||||||| || ||| || | || || | || || Sbjct 394339 CTGAGGAATGTTAGGTAGATTTTGAATAGAACCATTGTCTGTGATGATGTGTTGTTTCAT 394398 Query 68661 CTCATCATTCCACAATTTTCTC---TCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717 ||||| ||| | | | | || ||| | | | | || ||||||||| || Sbjct 394399 ACTATCATCCCATA---TCCCCAAATCAACCAAATCACGTAACAAATACGGATTAACGAT 394455 Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777 ||||||||| ||||| || || | ||| | || || || ||| |||| || | | | Sbjct 394456 TTGAAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGGCTCGAAACA 394515 Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837 |||||||| ||| | |||||||| ||||||||||||||||| ||||||| | || | Sbjct 394516 TTCATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAAGAGTAGAGA 394575 Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897 ||| || | ||||||| | ||||| | ||| | | | ||||||||| || || | Sbjct 394576 ATTCCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATCCCAGAGGTCGGT 394635 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957 ||| |||||| | ||| ||||| | || || | | | || || | ||| Sbjct 394636 TGGCTTTGTATTCCACATATCATATTGCAAAACACCTTGAGAAACTGGAGAACCTTCATA 394695 Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017 |||||||| || || || | || ||| | |||||| || || ||||| ||| ||| Sbjct 394696 GGTTTCATATGGACCATCTTTTTGAGCCAATTCACAGGATGATTCCAATGCGGCGTGATA 394755 Query 69018 AATTGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCTAGACTATCGAATGGATAAT 69076 ||| ||||| || || | |||| | | ||||| || ||| || ||||||||| | Sbjct 394756 AATGGTTTCAAAGATTTGAATATTCAAGTTCTTG-GCCTCTTGAGACTCGAATGGAACAC 394814 Query 69077 GTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCT 69136 |||| | || |||| ||| ||||| || | ||| || | | |||||||||| || ||| Sbjct 394815 GTAACATCATGAATGTATCAGCCAAACCATTAACACCTAGAGCGATAGGTCTGTGCCTCA 394874 Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 | || || ||| |||||| || |||||||| ||| || || | ||| || | || Sbjct 394875 TGTTAGAGTTTTTAGCTTCAATAACTGGATAATAGTTACGGTCAATGACTTTGTTTAAAT 394934 Query 69197 TTCGGACTACTA-CTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT--------- 69246 | || | || || | ||| | | || | ||| | ||| | | | | | Sbjct 394935 TACG-AGTAATAACCTTAGCAATTTCGTGTAGCCTAGCAAAGTTATACCATTGGGTCTTA 394993 Query 69247 CCATCTATAAC-------AAACATATT--CAGTGCTACAGATGCTAGATTACAAACTGCT 69297 |||||| | | ||| | || || | || |||||||||||||| || Sbjct 394994 CCATCTTCCGCTGTTTGAATACAGGATGGCAACGCAATGGAAGCTAGATTACAAACAGCA 395053 Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357 ||||| | | | |||| || || || ||||| ||| | |||||||||| Sbjct 395054 GTCTCATCTGGAGCAGAGTATTCTACAATTTCACAACATAAGTTAGAAGATTTGATAGTA 395113 Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417 || | ||| | ||| |||||||| ||||||| || ||||| || || || || || ||| Sbjct 395114 CCTAAATTCTTCTGGTTACTCTTCGTGTTACAAGCATCCTTATATAGCATGAATGGGGTA 395173 Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTC 69477 ||||||||| | |||| || | || | | ||| | | || || || | | Sbjct 395174 CCAGTTTCAGTTTGAGCCTCCAAGATGGCGTACCACAATTTCTGGGCTTTAATG--GTTT 395231 Query 69478 TTGTAACGCTTCTCTTTTTCA--TATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAA 69535 || || ||| | || | | || || |||| | |||||| || || | ||| Sbjct 395232 TTCTACCGCGACCCTCTGCAACGTAACGTTCGTATAACTCTTCGAACTCTTCGGCATAAA 395291 Query 69536 CATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAA 69595 ||||| | || || || |||| ||||| | | ||| | |||| || | | || | | Sbjct 395292 CATCAGCTAAACCTGGCGCTTCACTTGGAGAAAACAAGGTCCACTCACCGTTTTCTTGGA 395351 Query 69596 CTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTT 69655 | |||||||| |||| ||| ||||||||||| ||| ||| | |||||||| | | ||| Sbjct 395352 CACGTTTCATGAATAAATCAGGAATCCAAAGTGCTGGAAATAAATCTCTGGCACGAATTT 395411 Query 69656 CTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 69715 |||| || || ||||||| ||| ||| | || || | ||| || | ||||||||||| Sbjct 395412 CTTCCTTACCGTGATTTTTTCTAATATCAATGAAATCGAAAATGTCTGCATGCCATGGTT 395471 Query 69716 CTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAG 69775 | || |||| || | | || |||| ||| || || || || || | || | |||| Sbjct 395472 CAAGGTATAAAGCAAAAGCGCCTGGTCTTTTGTTACCACCTTGGTCGACATAACGAGCAG 395531 Query 69776 TGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAA 69835 | || ||| |||||| | ||| || || | ||| ||||| ||||||| || || | || Sbjct 395532 TATTGTTAAAGACTCGAATCATGGGGATTAAACCGTTAGAGGTACCATTAGTACCTGCAA 395591 Query 69836 TATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAG 69895 | || || | | ||||| ||| ||| ||| || || || || || |||| | Sbjct 395592 TGTAGGAACCGGTAGAACGAATGTTATGGATATGTAGCCCAATACCACCAGCAGTTTTGG 395651 Query 69896 AGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT-G 69954 | || | |||||| ||||| || ||||| || || || || ||| || |||| | Sbjct 395652 AAATCATAGCACATTCCTTCAAGGTATCATAAATTCCTTCAATAGAATCGTCCTTCATAG 395711 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 || ||| ||||| ||||||||| | || ||| || || || ||||| || ||| Sbjct 395712 CTACTAAG-AAACATGAAGACATTTGTGGGTGAGGAGTACCAGCGTTGAATAAAGTTGGA 395770 Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074 ||||| || |||| | || ||| | || ||||| ||||| ||| | || | ||| Sbjct 395771 GATGCATGGATGAAATACCTTAGAGACATCAAGTTGTAAGTTTCTATAACGGACTTGATA 395830 Query 70075 TCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134 || ||| || || | | || | ||| | | ||| ||||| ||||| | Sbjct 395831 TCTGTACCATGGATACCAACTGATACTCTCATGATTAAATGTTGAGGACGTTCAGCAACC 395890 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 | | ||| | ||| ||| || || ||||| || ||||| ||||| |||||| || Sbjct 395891 TCACCATTCGTCCTCAGCAGATAAGAACGTTCCAATGTCTTAAATCCAAAGTAGTTGAAT 395950 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254 ||| || || || || | ||| |||| |||| || ||||| | || |||| ||| Sbjct 395951 TGAAAATCCCTATCATAGACTATAGCAGAGTTTAATTCGTCCTTGTTTTCCATAACGATA 396010 Query 70255 TCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG 70314 || || | || || || ||||| || |||||||| ||||| |||||| Sbjct 396011 TCGTAGACTTCTTGAGAAATCATAGGAGAGTGTACCCCATTTTTTGGATTCACATAGGAA 396070 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 ||||||| || || | |||||||| |||||| || |||| ||| || ||| Sbjct 396071 TATAAATCAGTAATAACTTGCGAGAATAGTTTCGTTGTTTGTTTATGTAGATTCGAAATG 396130 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTAT 70433 || ||||| || |||||| | ||||| |||||||| || || || ||| || | | Sbjct 396131 GCAATTCTAGCAGCTAGAGTGGCATAATCAGGATGCACCGTTGT-CATGTAGGCACATGT 396189 Query 70434 TTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAAT--A 70491 ||| |||||||| | |||||||| | ||| || || || | ||| | ||| ||| Sbjct 396190 TTCAGCAGCTAAATTGTCTAATTCAACAGTAGTGACACCTTCATAGACACCTGAAATTAT 396249 Query 70492 ACTTTCATGGCTATTTTGATAGGATC--TATGAATTCTGTGTTCAGACCATAACATAATT 70549 || || | | ||| |||| || ||| ||||| ||| || || ||||||||||| Sbjct 396250 ACGTTGA--GTTATCTTGACAGCATCAATATGA--GCTGGGTCCAACCCATAACATAAAC 396305 Query 70550 TTCTAATACGAGATGTAATTTTATCAAACATAACATTCTCCTTATTTCCACTTCGTTTAA 70609 | ||||| | ||| ||||| ||||| |||| || |||| || | || |||| Sbjct 396306 GTGAGATACGGGCTGTGATTTTGTCAAATCTAACGGGTTCTTTATGACCGCCTCTTTTAT 396365 Query 70610 TGACGTACAT 70619 |||| |||| Sbjct 396366 AGACGAACAT 396375 >seq41 Length=1599359 Score = 322 bits (356), Expect = 7e-83 Identities = 602/870 (69%), Gaps = 22/870 (3%) Strand=Plus/Plus Query 39347 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTA 39406 |||||||| || ||||| || || ||||||| || ||||||||||||||||| ||||| Sbjct 1218690 TTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCCATGAAATCAAATGGATTT 1218749 Query 39407 GTTGCATT---ATAtttttttttAAATCCTAATTCTGA--AATCAATCTATCTGCAACAA 39461 || | || ||| ||||| ||| ||||| | || ||| | |||||| || |||| Sbjct 1218750 GTAACGTTGAAATACTTTTTGTTA---CCTAAAGC-GACTAAT-AGTCTATCAGCGACAA 1218804 Query 39462 ATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCT 39521 |||| | |||| ||||| | || |||||| || | | ||||| | ||| | Sbjct 1218805 ATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAACGATACTGGCAAAGCAT 1218864 Query 39522 CCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGATGTTACTACCTCAT 39581 || | | | | |||||| || || || || || || || ||| | || || | || Sbjct 1218865 CCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCTTTTCTA-TAATTGAT 1218923 Query 39582 CACTC-GGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCC 39640 || ||| || ||||| || | || || || || || ||||| || Sbjct 1218924 GGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAATCTGTATGTAAACCT 1218983 Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| | ||| || || || ||||| || | |||||||||| ||| ||| || Sbjct 1218984 TCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATTAAACCCTTCTTCTTT 1219043 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 | |||||| || |||||||| || ||||| ||||| || ||||| | ||| ||||||||| Sbjct 1219044 AACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCAATTGCAGCAAATGCA 1219103 Query 39761 ACAAGTCTCTCTCCGTAACTTGTAT---CATTATGTATCCACTTCTGTGCCCAATCAGCT 39817 || | ||| || || || ||| || || || ||||| | |||||| || ||| Sbjct 1219104 ACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCATCTAATTGCCCATTCTGCT 1219163 Query 39818 TTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACT 39876 || |||||| | || || | || |||||||| || | ||| |||| | Sbjct 1219164 TT-TTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAGAAATCACTTTCCTTTGG 1219222 Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936 ||||| | ||| ||||| || | | | || | || ||||| || ||||| ||| Sbjct 1219223 GTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTCAGAATGAATATTTTCCATCAT 1219282 Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTC 39996 || ||||| || |||||||| | ||||||| |||||| || |||| | || | || Sbjct 1219283 AATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACTTCTGCTGAGAAATTCTC 1219342 Query 39997 CGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAAT 40056 ||||||||||||| || || |||||| |||||| ||||||||||| || | ||| Sbjct 1219343 TACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAATGCCAAGACCCTTGAAAT 1219402 Query 40057 AAAATATTTTTCA-TCGGGTGTCAAT---TTATTCCAGTCATTGATATCTTTTGATATAT 40112 ||| || ||||| || || ||| | |||||||| |||| ||||| ||||| | || Sbjct 1219403 GAAAAATCTTTCATTCTCGT-TCATTCTATTATTCCAATCATGTATATCCTTTGAAAGAT 1219461 Query 40113 CTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCAC 40172 | | ||||||||| |||||||| || || ||||| | ||||| | ||| || ||| Sbjct 1219462 CGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGTAAGCTTGCCAAATTTCAT 1219521 Query 40173 GATATTGTATTGGAAAAATAACAAATCTAT 40202 |||||| |||||||| | ||||||||||| Sbjct 1219522 GATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908405027440