Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq41 279 4e-70
seq15 140 3e-28
>seq41
Length=1599359
Score = 279 bits (308), Expect = 4e-70
Identities = 427/601 (71%), Gaps = 12/601 (2%)
Strand=Plus/Minus
Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755
||| ||||| | |||||||| |||||||||| || |||||| ||||| | |||| |
Sbjct 1219550 TAGATTTGTTTTATTTCCAATCAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGA 1219491
Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815
|| || |||||||| || |||||| | ||| | | || || || |||||| |
Sbjct 1219490 AGCTTCTTTTTGGACTGCTGAAGAAATCGATCTTTCAAAGGATATACATGATTGGAATA- 1219432
Query 43816 ATTAAAACCACAAGAA--AAACATTTT--ATATCTTTGGTTTTGGCGTTTTTTGCTGCGA 43871
|| || || |||| ||| ||||| || || ||| ||||| ||||| || ||
Sbjct 1219431 ATAGAATGAACGAGAATGAAAGATTTTTCATTTCAAGGGTCTTGGCATTTTTCGCCGCTT 1219372
Query 43872 GCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCA--AGAAGTTCAATTACC 43929
|| || || || |||||||||||||| || ||| | || |||||||||| | ||
Sbjct 1219371 CTGATGGTATCGTTAATGAAAATTTGGT-AGAGAATTT-CTCAGCAGAAGTTCAAATTCC 1219314
Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989
||||| ||||||||||||||||||||| || |||||||||||||| || | ||
Sbjct 1219313 TGAAGCCAAGTGTTTTTATGGGTTTCAAATTATGATGGAAAATATTCATTCTGAGACTTA 1219254
Query 43990 CAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGC 44049
| | | ||||| ||||| || |||||||| | || | || ||||| |||||
Sbjct 1219253 CTCTTTACTGATCGATACTTATATCAAAGACCCAAAGGAAAGTGATTTCTTGTTCAATGC 1219194
Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAA 44106
|| || | | || |||||| | |||||||| ||||| ||| |||||| | |
Sbjct 1219193 TATCGATAATATTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGATTCAAGA 1219134
Query 44107 TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166
| |||| ||| | ||| || | || || ||||| | | ||||| ||||||||
Sbjct 1219133 TAGCAATGCAATTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTATTTTCTT 1219074
Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
|| || || ||||| || || |||||||||||||| ||||| |||||||| |||||
Sbjct 1219073 CTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTGGTTTGAC 1219014
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|||||||||||||| || | | |||||||| |||||| ||||||||||| |||||
Sbjct 1219013 CTTTTCAAATGAGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCTTGTTTGTT 1218954
Query 44287 A 44287
|
Sbjct 1218953 A 1218953
>seq15
Length=954869
Score = 140 bits (154), Expect = 3e-28
Identities = 380/576 (66%), Gaps = 17/576 (3%)
Strand=Plus/Minus
Query 19353 TTTGCTTT---ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAA 19409
|||||||| |||| ||||| ||| ||| ||||| | ||||| ||| || || |||
Sbjct 570027 TTTGCTTTTGTATGGTCCACCAGGTACTGGTAAAACCCTGATTGCAAGAAAAATTGGTAC 569968
Query 19410 ATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466
| | | | |||| |||| |||||||| |||||||| ||||| || | |||||
Sbjct 569967 AATGTTGAATGCAAAGGAACCA---AAAATTGTTAATGGTCCAGAAATTTTGAGCAAATA 569911
Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526
|| ||| ||| ||||| ||| | || || || || || |||| || | |
Sbjct 569910 CGTCGGTTCATCTGAAGAGAATATTCGTAACTTATTCAAAGATGCCGAAGCGGAGTACAG 569851
Query 19527 ACGTTTAGGGCGCAAAAGT-TCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585
| | | || | | || || |||| || || || | |||||||| || | | |
Sbjct 569850 G-GCTAAAGGTGAAGAATCATCACTGCATATCATTATCTTTGATGAATTAGATTCGGTTT 569792
Query 19586 GTAAGCAAAGAGGTTCT---GGTGTAAAT---GGAGTACATGACACTGTTGTCAATCAAC 19639
||| ||||||||||| |||| | || ||| ||| | |||||||||||||
Sbjct 569791 TTAAACAAAGAGGTTCAAGAGGTGACGGTACCGGGGTAGGTGATAATGTTGTCAATCAAT 569732
Query 19640 TCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTA 19699
| | ||||| | || |||||| | ||||| || |||||||| ||||| || ||||| |
Sbjct 569731 TGTTAGCAAAAATGGATGGTGTTGATCAACTAAACAATATTTTGGTTATAGGTATGACCA 569672
Query 19700 ATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCG 19759
|| | || ||||| |||| |||||||| || || ||| |||| ||| | | | |
Sbjct 569671 ATCGTAAAGATTTAATTGACATTGCCTTATTGCGTCCAGGTAGGTTTGAAGTTCAAGTAG 569612
Query 19760 AAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCA 19819
|||| | ||||| |||||| | || | | | ||||| | ||||| ||| | |
Sbjct 569611 AAATCCATTTACCTGATGAAAGAGGTAGATTACAGATTTTTGAAATACAAACAAAGAAGA 569552
Query 19820 TGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCA 19879
|| || | ||||| | | || | |||||| | | | |||| | |||||| || |
Sbjct 569551 TGAGAGAGAATAATATGATGGATAAGGATGTAAACTTGGCAGAATTGGCAGCGCTGACTA 569492
Query 19880 AAAACTATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
| || | || || ||| |||| || ||||||
Sbjct 569491 ACAATTTCTCAGGAGCTGAAATTGAAGGTCTAGTGA 569456
Score = 120 bits (132), Expect = 2e-22
Identities = 421/655 (64%), Gaps = 32/655 (5%)
Strand=Plus/Plus
Query 40740 GAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTG 40799
|| || ||||||||||| ||| ||||| ||| ||||| ||| ||||| || ||
Sbjct 129375 GAGCTATTATGGTTTATTTCAGGATGTACCGATGGAAAGAAGTTAGCAGAACAGGGTGTA 129434
Query 40800 CACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGG 40859
| || ||| | | | | |||| |||| | || | ||| |||| || ||
Sbjct 129435 AAGATATGGGAAGGCAATGGATCTAGGGAATATCTAGATAAATTGGGACTACATGAAAGA 129494
Query 40860 GATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT 40919
||||||||| | || |||||||| || ||||| | | | |||||||||||||| |||
Sbjct 129495 CGGGAAGGTGATTTAGGACCTGTTTACGGGTTTCAATGGAGGCATTTTGGAGCAAAGTAT 129554
Query 40920 GACACTATGTACTCT-GATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGA 40978
| || |||| | ||||| | ||||| | || ||||||||| | | ||
Sbjct 129555 AAGAC-ATGTGATGACGATTACAGTGGCCAAGGAGTTGACCAATTACAG---GATTTAAT 129610
Query 40979 TACGA--TTAAATCCGATCCC----GATAGCCGACGTATAATATTGTGCGCGTGGAACCC 41032
||| | ||||| ||| || ||||| ||| |||| || | || ||||| ||
Sbjct 129611 TACTAAATTAAAAACGAATCCATATGATAGAAGAC---TAATTATGAGTGCATGGAATCC 129667
Query 41033 AACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT--- 41089
|||| | | | ||||| || ||||| || ||| | || | ||| || || ||
Sbjct 129668 CCCGGATTTTCCACTTATGGCTTTACCACCATGCCATGTATTTTCTCAATTCTATGTCAC 129727
Query 41090 ------TTGCAATGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGA 41134
| | ||||| | |||| || ||| || |||||||||||| ||||
Sbjct 129728 TTTCCCTGGAAATGGAGGTAGACCTAAACTTTCCTGTTTGTTATATCAAAGATCATGTGA 129787
Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194
|||||| |||| || || |||||||| || || || || | || | ||||| ||
Sbjct 129788 TATGGGATTAGGAGTTCCATTTAACATTGCTTCCTACGCCTTGTTGACCAAGATGATAGC 129847
Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254
|| ||| || | | || ||||| || |||| || | ||||||| |||| | ||
Sbjct 129848 GCATGTTTGTGATATGGATCCAGGTGAGTTCATTCATACAATGGGAGATGCACATGTGTA 129907
Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314
| |||| | || | || | |||||| ||| ||| || | | ||||||
Sbjct 129908 TAAGGATCATGTGGACGCTTTGAGGGAACAAATGAGTAGAACGCCCACAGAATTTCCTCA 129967
Query 41315 GCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGCATCGATGATTTT 41369
|||| |||| | | || || || |||||||||||| | |||| ||||||
Sbjct 129968 GCTAAAAATTACAAGAAAAGTCGATAATATTGATGATTTTGCCTTCGACGATTTT 130022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455777176230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |