Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq41 279 4e-70 seq15 140 3e-28 >seq41 Length=1599359 Score = 279 bits (308), Expect = 4e-70 Identities = 427/601 (71%), Gaps = 12/601 (2%) Strand=Plus/Minus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | |||||||| |||||||||| || |||||| ||||| | |||| | Sbjct 1219550 TAGATTTGTTTTATTTCCAATCAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGA 1219491 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815 || || |||||||| || |||||| | ||| | | || || || |||||| | Sbjct 1219490 AGCTTCTTTTTGGACTGCTGAAGAAATCGATCTTTCAAAGGATATACATGATTGGAATA- 1219432 Query 43816 ATTAAAACCACAAGAA--AAACATTTT--ATATCTTTGGTTTTGGCGTTTTTTGCTGCGA 43871 || || || |||| ||| ||||| || || ||| ||||| ||||| || || Sbjct 1219431 ATAGAATGAACGAGAATGAAAGATTTTTCATTTCAAGGGTCTTGGCATTTTTCGCCGCTT 1219372 Query 43872 GCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCA--AGAAGTTCAATTACC 43929 || || || || |||||||||||||| || ||| | || |||||||||| | || Sbjct 1219371 CTGATGGTATCGTTAATGAAAATTTGGT-AGAGAATTT-CTCAGCAGAAGTTCAAATTCC 1219314 Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 ||||| ||||||||||||||||||||| || |||||||||||||| || | || Sbjct 1219313 TGAAGCCAAGTGTTTTTATGGGTTTCAAATTATGATGGAAAATATTCATTCTGAGACTTA 1219254 Query 43990 CAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGC 44049 | | | ||||| ||||| || |||||||| | || | || ||||| ||||| Sbjct 1219253 CTCTTTACTGATCGATACTTATATCAAAGACCCAAAGGAAAGTGATTTCTTGTTCAATGC 1219194 Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAA 44106 || || | | || |||||| | |||||||| ||||| ||| |||||| | | Sbjct 1219193 TATCGATAATATTCCACAAATTAAAGAAAAAGCAGAATGGGCAATTAGATGGATTCAAGA 1219134 Query 44107 TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166 | |||| ||| | ||| || | || || ||||| | | ||||| |||||||| Sbjct 1219133 TAGCAATGCAATTTTCGCTGAAAGATTAGTTGCATTTGCTGCAATTGAAGGTATTTTCTT 1219074 Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226 || || || ||||| || || |||||||||||||| ||||| |||||||| ||||| Sbjct 1219073 CTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAAGAAGAAGGGTTTAATGCCTGGTTTGAC 1219014 Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 |||||||||||||| || | | |||||||| |||||| ||||||||||| ||||| Sbjct 1219013 CTTTTCAAATGAGTTGATTTGCAGAGATGAAGGTTTACATACAGATTTTGCTTGTTTGTT 1218954 Query 44287 A 44287 | Sbjct 1218953 A 1218953 >seq15 Length=954869 Score = 140 bits (154), Expect = 3e-28 Identities = 380/576 (66%), Gaps = 17/576 (3%) Strand=Plus/Minus Query 19353 TTTGCTTT---ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAA 19409 |||||||| |||| ||||| ||| ||| ||||| | ||||| ||| || || ||| Sbjct 570027 TTTGCTTTTGTATGGTCCACCAGGTACTGGTAAAACCCTGATTGCAAGAAAAATTGGTAC 569968 Query 19410 ATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466 | | | | |||| |||| |||||||| |||||||| ||||| || | ||||| Sbjct 569967 AATGTTGAATGCAAAGGAACCA---AAAATTGTTAATGGTCCAGAAATTTTGAGCAAATA 569911 Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526 || ||| ||| ||||| ||| | || || || || || |||| || | | Sbjct 569910 CGTCGGTTCATCTGAAGAGAATATTCGTAACTTATTCAAAGATGCCGAAGCGGAGTACAG 569851 Query 19527 ACGTTTAGGGCGCAAAAGT-TCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585 | | | || | | || || |||| || || || | |||||||| || | | | Sbjct 569850 G-GCTAAAGGTGAAGAATCATCACTGCATATCATTATCTTTGATGAATTAGATTCGGTTT 569792 Query 19586 GTAAGCAAAGAGGTTCT---GGTGTAAAT---GGAGTACATGACACTGTTGTCAATCAAC 19639 ||| ||||||||||| |||| | || ||| ||| | ||||||||||||| Sbjct 569791 TTAAACAAAGAGGTTCAAGAGGTGACGGTACCGGGGTAGGTGATAATGTTGTCAATCAAT 569732 Query 19640 TCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTA 19699 | | ||||| | || |||||| | ||||| || |||||||| ||||| || ||||| | Sbjct 569731 TGTTAGCAAAAATGGATGGTGTTGATCAACTAAACAATATTTTGGTTATAGGTATGACCA 569672 Query 19700 ATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCG 19759 || | || ||||| |||| |||||||| || || ||| |||| ||| | | | | Sbjct 569671 ATCGTAAAGATTTAATTGACATTGCCTTATTGCGTCCAGGTAGGTTTGAAGTTCAAGTAG 569612 Query 19760 AAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCA 19819 |||| | ||||| |||||| | || | | | ||||| | ||||| ||| | | Sbjct 569611 AAATCCATTTACCTGATGAAAGAGGTAGATTACAGATTTTTGAAATACAAACAAAGAAGA 569552 Query 19820 TGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCA 19879 || || | ||||| | | || | |||||| | | | |||| | |||||| || | Sbjct 569551 TGAGAGAGAATAATATGATGGATAAGGATGTAAACTTGGCAGAATTGGCAGCGCTGACTA 569492 Query 19880 AAAACTATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915 | || | || || ||| |||| || |||||| Sbjct 569491 ACAATTTCTCAGGAGCTGAAATTGAAGGTCTAGTGA 569456 Score = 120 bits (132), Expect = 2e-22 Identities = 421/655 (64%), Gaps = 32/655 (5%) Strand=Plus/Plus Query 40740 GAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTG 40799 || || ||||||||||| ||| ||||| ||| ||||| ||| ||||| || || Sbjct 129375 GAGCTATTATGGTTTATTTCAGGATGTACCGATGGAAAGAAGTTAGCAGAACAGGGTGTA 129434 Query 40800 CACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGG 40859 | || ||| | | | | |||| |||| | || | ||| |||| || || Sbjct 129435 AAGATATGGGAAGGCAATGGATCTAGGGAATATCTAGATAAATTGGGACTACATGAAAGA 129494 Query 40860 GATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT 40919 ||||||||| | || |||||||| || ||||| | | | |||||||||||||| ||| Sbjct 129495 CGGGAAGGTGATTTAGGACCTGTTTACGGGTTTCAATGGAGGCATTTTGGAGCAAAGTAT 129554 Query 40920 GACACTATGTACTCT-GATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGA 40978 | || |||| | ||||| | ||||| | || ||||||||| | | || Sbjct 129555 AAGAC-ATGTGATGACGATTACAGTGGCCAAGGAGTTGACCAATTACAG---GATTTAAT 129610 Query 40979 TACGA--TTAAATCCGATCCC----GATAGCCGACGTATAATATTGTGCGCGTGGAACCC 41032 ||| | ||||| ||| || ||||| ||| |||| || | || ||||| || Sbjct 129611 TACTAAATTAAAAACGAATCCATATGATAGAAGAC---TAATTATGAGTGCATGGAATCC 129667 Query 41033 AACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT--- 41089 |||| | | | ||||| || ||||| || ||| | || | ||| || || || Sbjct 129668 CCCGGATTTTCCACTTATGGCTTTACCACCATGCCATGTATTTTCTCAATTCTATGTCAC 129727 Query 41090 ------TTGCAATGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGA 41134 | | ||||| | |||| || ||| || |||||||||||| |||| Sbjct 129728 TTTCCCTGGAAATGGAGGTAGACCTAAACTTTCCTGTTTGTTATATCAAAGATCATGTGA 129787 Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194 |||||| |||| || || |||||||| || || || || | || | ||||| || Sbjct 129788 TATGGGATTAGGAGTTCCATTTAACATTGCTTCCTACGCCTTGTTGACCAAGATGATAGC 129847 Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 || ||| || | | || ||||| || |||| || | ||||||| |||| | || Sbjct 129848 GCATGTTTGTGATATGGATCCAGGTGAGTTCATTCATACAATGGGAGATGCACATGTGTA 129907 Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAAC 41314 | |||| | || | || | |||||| ||| ||| || | | |||||| Sbjct 129908 TAAGGATCATGTGGACGCTTTGAGGGAACAAATGAGTAGAACGCCCACAGAATTTCCTCA 129967 Query 41315 GCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGCATCGATGATTTT 41369 |||| |||| | | || || || |||||||||||| | |||| |||||| Sbjct 129968 GCTAAAAATTACAAGAAAAGTCGATAATATTGATGATTTTGCCTTCGACGATTTT 130022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455777176230