Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq43 100 2e-16 seq27 86.0 5e-12 >seq43 Length=816610 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | || ||||| || | || || |||||||||||||| ||||| | Sbjct 809188 CCACCACGCAATCTTAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 809247 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | || || || |||||||| ||| |||| | | ||| || || || || Sbjct 809248 AGAGTTCTGC-CATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 809306 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || || || ||| | | | || | ||||| | || ||| || Sbjct 809307 AATACCCTCCTTGTCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCAC 809366 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| || || |||| |||||| ||||||||||||||| Sbjct 809367 CTCCAGGGTGATAGTCTTACCTGTCAAAGTTTTGACAAAGATTTGCATA 809415 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | ||| ||||| || || || || |||||||||||||| ||||| | Sbjct 809416 CCACCACGCAATCTCAAGACCAAGTGCAATGTGGATTCTTTTTGAATATTATAGTCAGAC 809475 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | || || || |||||||| ||| |||| | | ||| || || || || Sbjct 809476 AGAGTTCTGC-CATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGGGG 809534 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || || || ||| | | || ||||| | || ||| || Sbjct 809535 AATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAGTGGTGTCCGAGGATTCCAC 809594 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || |||| || || |||| ||||| ||||| ||||||||| Sbjct 809595 CTCCAACGTAATAGTCTTCCCTGTCAACGTTTTGACAAATATTTGCATA 809643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | ||| ||||| || | || || |||||||||||||| ||||| | Sbjct 812608 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812667 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | || || || |||||||| ||| |||| | | ||| || || || || Sbjct 812668 AGAGTTCTGC-CATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812726 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || || || ||| | | || | ||||| | || ||| || Sbjct 812727 AATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCAC 812786 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || |||| || || |||| ||||| ||||| ||||||||| Sbjct 812787 CTCCAACGTAATAGTCTTACCTGTCAACGTTTTGACAAATATTTGCATA 812835 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | ||| ||||| || | || || |||||||||||||| ||||| | Sbjct 812836 CCACCACGCAATCTCAAGACCAAGTGCAGTGTGGATTCTTTTTGAATATTATAGTCAGAC 812895 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | || || || |||||||| ||| |||| | | ||| || || || || Sbjct 812896 AGAGTTCTGC-CATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 812954 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || || || ||| | | || | ||||| | || ||| || Sbjct 812955 AATACCCTCCTTGTCCTGAATTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCAC 813014 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| || || |||| ||||| || ||||||||||| Sbjct 813015 CTCCAACGTAATAGTCTTACCTGTCAACGTTTTAACGAAGATTTGCAT 813062 >seq27 Length=921605 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/221 (69%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 130753 ATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||||| ||||||||| ||||||| || || || | || ||||| ||||| || Sbjct 394447 ATTAACGATTTGAAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGG 394506 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 || || |||| || | || || ||||| | ||| | ||| || ||||| ||||| Sbjct 394507 CTCGAAACATTCATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAA 394566 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 | ||||||||| | | ||| || | | ||||| | ||||| |||||||||| Sbjct 394567 GAGTAGAGAATTCCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATCCC- 394625 Query 130933 TAGAGAGGTAGGTTTGACATTG--TTCCACATATCAAATTG 130971 |||||| || ||| | ||| |||||||||||| |||| Sbjct 394626 ---AGAGGTCGG-TTGGCTTTGTATTCCACATATCATATTG 394662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934161771152