Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq27 264 1e-65
>seq27
Length=921605
Score = 264 bits (292), Expect = 1e-65
Identities = 899/1386 (65%), Gaps = 31/1386 (2%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||| | ||| |||| || || |||||||||| || || ||||| | || ||
Sbjct 394487 TACATGTTCGAGGTGAATGGCTCGAAACATTCATTATATCCTAAAATTTGAGATGTTGAT 394546
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| |||||||||||||||| | ||| || | | ||| | ||||| || |
Sbjct 394547 GCAGTTGGCATTGGTGCCAAGAGTAGAGAATTCCTGATACCATGTTCCTTAATTTTCTGT 394606
Query 110828 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAG 110886
|| | | ||||| || || | | |||| || |||| |||| ||| | || |
Sbjct 394607 TTCAAAGTGTCCCAATCCCAGAGGTCGGTTGGCTTTGTATTCC-ACATATCATATTGCAA 394665
Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA 110946
|| ||||| || | |||||||| ||| |||||||||| | ||| | || ||||||
Sbjct 394666 AACACCTTGAGAAACTGGAGAACCTTCATAGGTTTCATATGGACCATCTTTTTGAGCCAA 394725
Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006
||||||| | |||| | |||||||| |||||||||||||| || ||||| |
Sbjct 394726 TTCACAGGATGATTCCAATGCGGCGTGATAAATGGTTTCAAAGATTTGAATATTCAAGTT 394785
Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTG 111066
|||||| || | || || |||| || ||| || ||| ||| || | ||| |
Sbjct 394786 CTTGGCCTCTTGAGACTCGAATGGAACACGTAACATCATGAATGTATCAGCCAAACCATT 394845
Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126
|||||| | | | ||||||||||| | ||| ||||| ||| || ||| |||||
Sbjct 394846 AACACCTAGAGCGATAGGTCTGTGCCTCATGTTAGAGTTTTTAGCTTCAATAACTGGATA 394905
Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186
| | || | |||||||||| ||||| ||| |||| || ||| | ||||| || ||
Sbjct 394906 ATAGTTACGGTCAATGACTTTGTTTAAATTACGAGTAATAACCTTAGCAATTTCGTGTAG 394965
Query 111187 TTTTTCATAATCAAA--AGTGCG----AGTCTCTTC-----ATTGACATAC--TTTGGAA 111233
| || | | | | | || | | ||||| |||| |||| ||| |
Sbjct 394966 CCTAGCAAAGTTATACCATTGGGTCTTACCATCTTCCGCTGTTTGA-ATACAGGATGGCA 395024
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
|| || || || | ||| |||||||| |||||||| | | | ||| |||| |||||
Sbjct 395025 ACGCAATGGAAGCTAGATTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCTACAATTT 395084
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| ||||||||| ||| || || || || |||||||| |||||||||||| |||| |
Sbjct 395085 CACAACATAAGTTAGAAGATTTGATAGTACCTAAATTCTTCTGGTTACTCTTCGTGTTAC 395144
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||| || |||||| | || || || || || || || | | | || || |
Sbjct 395145 AAGCATCCTTATATAGCATGAATGGGGTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGT 395204
Query 111414 TCCA-AACATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTT 111469
||| || || | ||| | ||||| | | | || ||||| || |||| |
Sbjct 395205 ACCACAATTTCTG-GGC---TTTAATGGTTTTTCTACCGCGACCCTCTGCAACGTAACGT 395260
Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529
||| | |||| ||||| || | | || | | |||||| || | ||||
Sbjct 395261 TCGTATAACTCTTCGAACTCTTCGGCATAAACATCAGCTAAACCTGGCGCTTCACTTGGA 395320
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
| || | | ||| | ||| ||| | || || |||||||| | || ||||||||
Sbjct 395321 GAAAACAAGGTCCACTCACCGTTTTCTTGGACACGTTTCATGAATAAATCAGGAATCCAA 395380
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
|| | || ||| | |||||| ||| ||||| | ||| || || || | |||
Sbjct 395381 AGTGCTGGAAATAAATCTCTGGCACGAATTTCTTCCTTACCGTGATTTTTTCTAATATCA 395440
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 111705
| ||| || | || || || |||||||| ||||| || | || | || || |||
Sbjct 395441 ATGAAATCGAAAATGTCTGCATGCCATGGTTCAAGGTATAAAGCAAAAGCGCCTGGTCTT 395500
Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
| | ||| |||| | ||||| || || || |||||| || |||| ||| || ||
Sbjct 395501 TTG-TTACCACCTTGGTCGACATAACGAGCAGTATTGTTAAAGACTCGAATCATGGGGAT 395559
Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825
| ||| | || |||||| || || ||| || | | | | | |||
Sbjct 395560 TAAACCGTTAGAGGTACCATTAGTACCTGCAATGTAGGAACCGGTAGAACGAATGTTATG 395619
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
||| || | ||||||||| ||||| || || || ||||| ||| | | || |
Sbjct 395620 GATATGTAGCCCAATACCACCAGCAGTTTTGGAAATCATAGCACATTCCTTCAAGGTATC 395679
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
||| || || | || || || ||||| | || | | ||| || ||||| || ||
Sbjct 395680 ATAAATTCCTTCAATAGAATCGTCCTTCATAGCTACTAAGAAACATGAAGACATTTGTGG 395739
Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACA 112004
|| |||||||| ||||| | ||||| | ||| || ||||| ||||||| | ||||
Sbjct 395740 GTGAGGAGTACCAGCGTTGAATAAAGTTGGAGATGCATGGATGAA-ATACCTTAGAGACA 395798
Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064
|| || ||| || || | || || | || ||| || ||||| || | || || |
Sbjct 395799 TCAAGTTGTAAGTTTCTATAACGGACTTGATATCTGTACCATGGATACCAACTGATACTC 395858
Query 112065 GCATGA 112070
|||||
Sbjct 395859 TCATGA 395864
Score = 96.9 bits (106), Expect = 4e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|||||| | |||| ||| ||||||| | ||||| || |||||||||||| |||||
Sbjct 541581 TATGGTAGAATTGCCCCAAGATCCGGCTTAGCTGTAAAACATGGTATTCAAACAGGTGCT 541522
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
||||| | || || |||||||| ||||| ||||| || | |||||||| |
Sbjct 541521 GGTGTCGTAGACAGAGATTATACAGGCGAAGTGAAAGTTGTCTTATTCAATCATTCTAAT 541462
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACT 164764
||||| |||||| | || ||||| || ||| | || |||||
Sbjct 541461 AAAGATTTTGAGATTAATAAAGGTGACCGCGTTGCTCAACT 541421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031638881600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |