Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq27 192 7e-44 >seq27 Length=921605 Score = 192 bits (212), Expect = 7e-44 Identities = 870/1369 (64%), Gaps = 29/1369 (2%) Strand=Plus/Minus Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGG 104310 ||||| ||||| ||| || | || || | || || ||| || |||||| | |||| Sbjct 395847 GGTATCCATGGTACAGATATCAAGTCCGTTATAGAAACTTACAACTTGATGTCTCTAAGG 395788 Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370 ||| ||||| || ||| | ||||| | ||||| |||||||| || || |||||||| Sbjct 395787 TAT-TTCATCCATGCATCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTC 395729 Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430 || ||| | | || | ||||| || || || | || || |||| || | | Sbjct 395728 TTCATGTTTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAA 395669 Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490 ||| ||||| || || || ||||| ||||||||| | || |||||| | | | Sbjct 395668 GGAATGTGCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCG 395609 Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550 | | || ||| || || |||||| || | ||| | || || ||| | Sbjct 395608 TTCTACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGAT 395549 Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGAT 104606 ||| || |||||| || || || ||||| | |||| ||| | |||| || Sbjct 395548 TCGAGTCTTTAACAATACTGCTCGTTATGTCGACCAAGGTGGTAA-CAAAAGACCAGGCG 395490 Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666 || | || | || ||||| |||||||| || || || | || ||| |||| | | Sbjct 395489 CTTTTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAA 395430 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCA 104725 || || ||| | || || || |||| | ||| | || | || || |||||||| Sbjct 395429 AAAATCACGGTAAGGAAGAAATTCG-TGCCAGAGATTTATTTCCAGCACTTTGGATTCCT 395371 Query 104726 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 104785 ||| | |||||||| | || | || | || | ||| | | |||| |||| | Sbjct 395370 GATTTATTCATGAAACGTGTCCAAGAAAACGGTGAGTGGACCTTGTTTTCTCCAAGTGAA 395311 Query 104786 GCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG 104845 || || ||| | | |||| | || ||||| |||| | ||| | |||| Sbjct 395310 GCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAACGTTACGTT 395251 Query 104846 GAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 104905 | ||| ||||| | | || | ||| | ||||| | || || | || Sbjct 395250 GCAGAGGGTCGCGGTAGAAAAACCATTAAAGCCCAGAAATTGTGGTACGCCATCTTGGAG 395191 Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965 ||||||| || |||||||| |||| |||||| || || || || |||||| |||||| Sbjct 395190 GCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATGCTTGTAACACGAAGAGT 395131 Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || || |||||||| ||| ||||| ||| || | ||| ||||| | |||| Sbjct 395130 AACCAGAAGAATTTAGGTACTATCAAATCTTCTAACTTATGTTGTGAAATTGTAGAATAC 395071 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTAT- 105082 | | ||||||||| ||||| ||||| || || || || || | || | |||| Sbjct 395070 TCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTGCGTTGCCATCCTGTATT 395011 Query 105083 ------GTGGATCCAGAGACAAAGACA------TTTGATTATGAAAAACTCCACGAAGTT 105130 | ||| ||| ||||| | | | | || | || |||||| || Sbjct 395010 CAAACAGCGGA---AGATGGTAAGACCCAATGGTATAACTTTGCTAGGCTACACGAAATT 394954 Query 105131 ACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG 105190 | || | | || || |||||| ||| ||||| | || | ||| || ||| Sbjct 394953 GCTAAGGTTATTACTCGTAATTTAAACAAAGTCATTGACCGTAACTATTATCCAGTTATT 394894 Query 105191 ACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCG 105250 ||| || ||||| ||||| ||| | || || | ||| |||||| | ||| | || Sbjct 394893 GAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGTGTTAATGGTTTGGCT 394834 Query 105251 GATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310 ||| |||||| | | || |||| || || | || || ||| | | ||| Sbjct 394833 GATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGCCAAGAACTTGAATATT 394774 Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370 | || ||||| ||||| ||||||||||| | || | | || ||||| | Sbjct 394773 CAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGTGAATTGGCTCAAAAA 394714 Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430 ||||||||||||||||||| ||| |||||||||| ||| ||||| || | |||| |||| Sbjct 394713 GATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGTGTTTTGCAATATGAT 394654 Query 105431 ATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489 |||| |||| | |||| | | || || ||||| || | || | || || Sbjct 394653 ATGT-GGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTTGAAACAGAAAATTAA 394595 Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549 ||| | ||| | | || ||| ||| |||| ||||||||||| || || || | || Sbjct 394594 GGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAACATCTCA 394535 Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598 ||| || || |||||||||| || || || | ||| ||||||| ||| Sbjct 394534 AATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTAT 394486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260464625040