Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq27 192 7e-44
>seq27
Length=921605
Score = 192 bits (212), Expect = 7e-44
Identities = 870/1369 (64%), Gaps = 29/1369 (2%)
Strand=Plus/Minus
Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGG 104310
||||| ||||| ||| || | || || | || || ||| || |||||| | ||||
Sbjct 395847 GGTATCCATGGTACAGATATCAAGTCCGTTATAGAAACTTACAACTTGATGTCTCTAAGG 395788
Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370
||| ||||| || ||| | ||||| | ||||| |||||||| || || ||||||||
Sbjct 395787 TAT-TTCATCCATGCATCTCCAACTTTATTCAACGCTGGTACTCCTCACCCACAAATGTC 395729
Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430
|| ||| | | || | ||||| || || || | || || |||| || | |
Sbjct 395728 TTCATGTTTCTTAGTAGCTATGAAGGACGATTCTATTGAAGGAATTTATGATACCTTGAA 395669
Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490
||| ||||| || || || ||||| ||||||||| | || |||||| | | |
Sbjct 395668 GGAATGTGCTATGATTTCCAAAACTGCTGGTGGTATTGGGCTACATATCCATAACATTCG 395609
Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550
| | || ||| || || |||||| || | ||| | || || ||| |
Sbjct 395608 TTCTACCGGTTCCTACATTGCAGGTACTAATGGTACCTCTAACGGTTTAATCCCCATGAT 395549
Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGAT 104606
||| || |||||| || || || ||||| | |||| ||| | |||| ||
Sbjct 395548 TCGAGTCTTTAACAATACTGCTCGTTATGTCGACCAAGGTGGTAA-CAAAAGACCAGGCG 395490
Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666
|| | || | || ||||| |||||||| || || || | || ||| |||| | |
Sbjct 395489 CTTTTGCTTTATACCTTGAACCATGGCATGCAGACATTTTCGATTTCATTGATATTAGAA 395430
Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCA 104725
|| || ||| | || || || |||| | ||| | || | || || ||||||||
Sbjct 395429 AAAATCACGGTAAGGAAGAAATTCG-TGCCAGAGATTTATTTCCAGCACTTTGGATTCCT 395371
Query 104726 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 104785
||| | |||||||| | || | || | || | ||| | | |||| |||| |
Sbjct 395370 GATTTATTCATGAAACGTGTCCAAGAAAACGGTGAGTGGACCTTGTTTTCTCCAAGTGAA 395311
Query 104786 GCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG 104845
|| || ||| | | |||| | || ||||| |||| | ||| | ||||
Sbjct 395310 GCGCCAGGTTTAGCTGATGTTTATGCCGAAGAGTTCGAAGAGTTATACGAACGTTACGTT 395251
Query 104846 GAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 104905
| ||| ||||| | | || | ||| | ||||| | || || | ||
Sbjct 395250 GCAGAGGGTCGCGGTAGAAAAACCATTAAAGCCCAGAAATTGTGGTACGCCATCTTGGAG 395191
Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965
||||||| || |||||||| |||| |||||| || || || || |||||| ||||||
Sbjct 395190 GCTCAAACTGAAACTGGTACCCCATTCATGCTATATAAGGATGCTTGTAACACGAAGAGT 395131
Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025
|| || |||||||| ||| ||||| ||| || | ||| ||||| | ||||
Sbjct 395130 AACCAGAAGAATTTAGGTACTATCAAATCTTCTAACTTATGTTGTGAAATTGTAGAATAC 395071
Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTAT- 105082
| | ||||||||| ||||| ||||| || || || || || | || | ||||
Sbjct 395070 TCTGCTCCAGATGAGACTGCTGTTTGTAATCTAGCTTCCATTGCGTTGCCATCCTGTATT 395011
Query 105083 ------GTGGATCCAGAGACAAAGACA------TTTGATTATGAAAAACTCCACGAAGTT 105130
| ||| ||| ||||| | | | | || | || |||||| ||
Sbjct 395010 CAAACAGCGGA---AGATGGTAAGACCCAATGGTATAACTTTGCTAGGCTACACGAAATT 394954
Query 105131 ACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG 105190
| || | | || || |||||| ||| ||||| | || | ||| || |||
Sbjct 394953 GCTAAGGTTATTACTCGTAATTTAAACAAAGTCATTGACCGTAACTATTATCCAGTTATT 394894
Query 105191 ACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCG 105250
||| || ||||| ||||| ||| | || || | ||| |||||| | ||| | ||
Sbjct 394893 GAAGCTAAAAACTCTAACATGAGGCACAGACCTATCGCTCTAGGTGTTAATGGTTTGGCT 394834
Query 105251 GATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310
||| |||||| | | || |||| || || | || || ||| | | |||
Sbjct 394833 GATACATTCATGATGTTACGTGTTCCATTCGAGTCTCAAGAGGCCAAGAACTTGAATATT 394774
Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370
| || ||||| ||||| ||||||||||| | || | | || ||||| |
Sbjct 394773 CAAATCTTTGAAACCATTTATCACGCCGCATTGGAATCATCCTGTGAATTGGCTCAAAAA 394714
Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430
||||||||||||||||||| ||| |||||||||| ||| ||||| || | |||| ||||
Sbjct 394713 GATGGTCCATATGAAACCTATGAAGGTTCTCCAGTTTCTCAAGGTGTTTTGCAATATGAT 394654
Query 105431 ATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489
|||| |||| | |||| | | || || ||||| || | || | || ||
Sbjct 394653 ATGT-GGAATACAAAGCCAACCGACCTCTGGGATTGGGACACTTTGAAACAGAAAATTAA 394595
Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549
||| | ||| | | || ||| ||| |||| ||||||||||| || || || | ||
Sbjct 394594 GGAACATGGTATCAGGAATTCTCTACTCTTGGCACCAATGCCAACTGCATCAACATCTCA 394535
Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598
||| || || |||||||||| || || || | ||| ||||||| |||
Sbjct 394534 AATTTTAGGATATAATGAATGTTTCGAGCCATTCACCTCGAACATGTAT 394486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260464625040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |