Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq15 138 1e-27
seq19 134 1e-26
seq43 125 6e-24
>seq15
Length=954869
Score = 138 bits (152), Expect = 1e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || |||||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 83740 TTCGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 83799
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || ||||||||||||||||| || ||||| || ||||| | |||
Sbjct 83800 GACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTA 83859
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || ||||||||||| || || | || || ||||||||||||||
Sbjct 83860 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 83919
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||||| ||| | ||| | ||||| ||
Sbjct 83920 GAATCTACTTTACACTTGGTCTTGAGATTGAGAGGTGGTAT 83960
>seq19
Length=616425
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| |||| || ||| | ||||| | ||||| ||| | ||
Sbjct 593233 ATGCAAATTTTTGTCAAAACTTTGACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 593174
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| ||||| || ||||| || |||
Sbjct 593173 GACACTATTGATAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 593114
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || ||||| |||||||| || ||| | || |||||||||
Sbjct 593113 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCTTATCTGATTACAAC 593054
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || || || || || ||| | ||| | |||||
Sbjct 593053 ATCCAAAAGGAATCTACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 593007
>seq43
Length=816610
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| |||| || ||| |||| || || || |||||| | ||
Sbjct 809414 ATGCAAATCTTTGTCAAAACTTTGACAGGTAAGACTATCACCCTGGAGGTGGAATCCTCT 809355
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| |||||||||||||| || || || ||||| || ||
Sbjct 809354 GACACCATTGATAACGTCAAATCTAAAATTCAAGACAAGGAGGGTATTCCACCAGACCAG 809295
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||| || |||||| |||| || | || | || || || ||
Sbjct 809294 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809235
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| || || || | || ||||| || | ||||| |||||
Sbjct 809234 ATTCAAAAAGAATCCACACTGCACTTGGTCTTAAGATTGCGTGGTGG 809188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918149921920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |