Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq15 120 2e-22
seq43 104 2e-17
seq19 104 2e-17
>seq15
Length=954869
Score = 120 bits (132), Expect = 2e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678
|||||| ||||| | || || || || |||||| | |||||||| || | |||||| |
Sbjct 83739 TTTCGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 83798
Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737
||| ||| | || | || | || |||||||||||| | || || || ||||| | |
Sbjct 83799 TGACAATGTCAAGTCTAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGAT 83857
Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797
|||| ||||| || || ||| ||||||| | | ||||| || |||||||| ||||
Sbjct 83858 TAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 83917
Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||| || || ||||| || || || || ||| |||| ||
Sbjct 83918 AAGAATCTACTTTACACTTGGTCTTGAGATTGAGAGGTGG 83957
>seq43
Length=816610
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| || ||||||||||| | || || || || || || | || || || |||
Sbjct 813065 AACATGCAAATCTTCGTTAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCC 813006
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| |||| ||| | ||| | |||| || ||||| || ||| | || |||||
Sbjct 813005 TCGGACACCATTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCACCAGA 812947
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||| | || || || || || ||||||||||| || | | ||| | || ||
Sbjct 812946 CCAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTA 812887
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || |||||||| |||||| | || || || || || ||||| || ||
Sbjct 812886 TAATATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812836
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || ||||| | || || || || ||||| || || || || ||| |
Sbjct 809414 ATGCAAATCTTTGTCAAAACTTTGACAGGTAAGACTATCACCCTGGAGGTGGAATCCTCT 809355
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| |||||| ||||| || ||| | || ||||| ||
Sbjct 809354 GACACCATTGATAACGTCAAATCTAAAATTCAAGACAAGGAGGGTATTCCACCAGACCAG 809295
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || || || || ||||||||||| || | | ||| | || || ||
Sbjct 809294 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809235
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| |||||||| |||||| | || || || ||||| ||||| || ||
Sbjct 809234 ATTCAAAAAGAATCCACACTGCACTTGGTCTTAAGATTGCGTGGTGG 809188
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || ||||| | || || || || || || | || || || ||| ||
Sbjct 809642 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809583
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| ||| ||| | ||| | |||| || ||||| || ||| | || ||||| ||
Sbjct 809582 GACACCACTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCCCCAGACCA 809524
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || ||||||||||| || | | ||| | || || ||
Sbjct 809523 GCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAA 809464
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| |||||||| |||||||| || || || || || ||||| || ||
Sbjct 809463 TATTCAAAAAGAATCCACATTGCACTTGGTCTTGAGATTGCGTGGTGG 809416
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || ||||| | || || || || || || | || || || ||| ||
Sbjct 812834 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812775
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| || ||||| || ||| | || ||||| ||
Sbjct 812774 GACACCATTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCACCAGACCA 812716
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || ||||||||||| || | | ||| | || || ||
Sbjct 812715 GCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAA 812656
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| |||||||| |||||| | || || || || || ||||| || ||
Sbjct 812655 TATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812608
>seq19
Length=616425
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| ||||| || ||||| | || || || || || || | |||||||| ||
Sbjct 593236 AAGATGCAAATTTTTGTCAAAACTTTGACTGGTAAGACCATTACCTTAGAAGTTGAATCT 593177
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| |||| ||| | || | || | | ||||| |||||| | || || ||
Sbjct 593176 TCTGACACTATTGATAATGTCAAGTCTAAGA-TCCAAGACAAGGAAGGTATTCCACCTGA 593118
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||| | || || ||||| || ||||| ||||||| | | || ||| |||||
Sbjct 593117 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCTTATCTGATTA 593058
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || || || || || ||||| || || ||| |||| ||
Sbjct 593057 CAACATCCAAAAGGAATCTACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 593007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009410503368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |