Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq15 120 2e-22 seq43 104 2e-17 seq19 104 2e-17 >seq15 Length=954869 Score = 120 bits (132), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| ||||| | || || || || |||||| | |||||||| || | |||||| | Sbjct 83739 TTTCGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 83798 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 ||| ||| | || | || | || |||||||||||| | || || || ||||| | | Sbjct 83799 TGACAATGTCAAGTCTAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGAT 83857 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 |||| ||||| || || ||| ||||||| | | ||||| || |||||||| |||| Sbjct 83858 TAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 83917 Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| || || ||||| || || || || ||| |||| || Sbjct 83918 AAGAATCTACTTTACACTTGGTCTTGAGATTGAGAGGTGG 83957 >seq43 Length=816610 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||||||||| | || || || || || || | || || || ||| Sbjct 813065 AACATGCAAATCTTCGTTAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCC 813006 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| |||| ||| | ||| | |||| || ||||| || ||| | || ||||| Sbjct 813005 TCGGACACCATTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCACCAGA 812947 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || || || || ||||||||||| || | | ||| | || || Sbjct 812946 CCAGCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTA 812887 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| |||||| | || || || || || ||||| || || Sbjct 812886 TAATATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812836 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || || || || ||||| || || || || ||| | Sbjct 809414 ATGCAAATCTTTGTCAAAACTTTGACAGGTAAGACTATCACCCTGGAGGTGGAATCCTCT 809355 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| |||||| ||||| || ||| | || ||||| || Sbjct 809354 GACACCATTGATAACGTCAAATCTAAAATTCAAGACAAGGAGGGTATTCCACCAGACCAG 809295 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || ||||||||||| || | | ||| | || || || Sbjct 809294 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAAT 809235 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | || || || ||||| ||||| || || Sbjct 809234 ATTCAAAAAGAATCCACACTGCACTTGGTCTTAAGATTGCGTGGTGG 809188 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || || || || || || | || || || ||| || Sbjct 809642 ATGCAAATATTTGTCAAAACGTTGACAGGGAAGACTATTACGTTGGAGGTGGAATCCTCG 809583 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | |||| || ||||| || ||| | || ||||| || Sbjct 809582 GACACCACTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCCCCAGACCA 809524 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || ||||||||||| || | | ||| | || || || Sbjct 809523 GCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAA 809464 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||||| || || || || || ||||| || || Sbjct 809463 TATTCAAAAAGAATCCACATTGCACTTGGTCTTGAGATTGCGTGGTGG 809416 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || || || || || || | || || || ||| || Sbjct 812834 ATGCAAATATTTGTCAAAACGTTGACAGGTAAGACTATTACGTTGGAGGTGGAATCCTCG 812775 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| || ||||| || ||| | || ||||| || Sbjct 812774 GACACCATTGACAATGTCAAATCTAAAA-TTCAGGACAAGGAGGGTATTCCACCAGACCA 812716 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || ||||||||||| || | | ||| | || || || Sbjct 812715 GCAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGCAGAACTCTGTCTGACTATAA 812656 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | || || || || || ||||| || || Sbjct 812655 TATTCAAAAAGAATCCACACTGCACTTGGTCTTGAGATTGCGTGGTGG 812608 >seq19 Length=616425 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| ||||| || ||||| | || || || || || || | |||||||| || Sbjct 593236 AAGATGCAAATTTTTGTCAAAACTTTGACTGGTAAGACCATTACCTTAGAAGTTGAATCT 593177 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | || | || | | ||||| |||||| | || || || Sbjct 593176 TCTGACACTATTGATAATGTCAAGTCTAAGA-TCCAAGACAAGGAAGGTATTCCACCTGA 593118 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| | || || ||||| || ||||| ||||||| | | || ||| ||||| Sbjct 593117 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCTTATCTGATTA 593058 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || || || || || ||||| || || ||| |||| || Sbjct 593057 CAACATCCAAAAGGAATCTACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 593007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009410503368