Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017
-06-15] 46 sequences; 10,414,811 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq41 302 4e-77
>seq41
Length=1599359
Score = 302 bits (334), Expect = 4e-77
Identities = 614/898 (68%), Gaps = 19/898 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| || || || ||||| |||| ||| |||||||| ||||| || || | ||
Sbjct 1218660 ACACCAGCCTTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAT 1218719
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATG-TTTTTCACACTTTAG 4366
||||| |||||||| |||||||| ||||| || ||||| ||| ||||| || | |
Sbjct 1218720 GAAATGTTTTCCATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCTAA- 1218778
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || | | || ||||| |||||||| | || ||| |||| || ||| || ||
Sbjct 1218779 AGCGACTAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCAT 1218838
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| | ||| || || | || | | ||| | || ||| || || |||||
Sbjct 1218839 ACCCAATAACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTC 1218898
Query 4487 TGTGATTATATCTTTTAT--TTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
||||| || | || ||| || || || |||||||||| || | | || ||
Sbjct 1218899 GGTGATAATCTTTTCTATAATTGATGGTTC--TGGTTTATTTTTCAAATGAGCGAATAAC 1218956
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| |||||||| ||| |||||||| ||||||| ||||| || || ||||| ||
Sbjct 1218957 AAACAAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTC 1219016
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
|| || ||||||||||| |||| || | |||||| ||||| ||||| || ||||| |||
Sbjct 1219017 AAACCAGGCATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAG 1219076
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT--TGT 4722
|| || ||||| | || ||||| || ||||||| |||| | || || | |
Sbjct 1219077 AAAATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAA--AATTGCATTGCTAT 1219134
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
||| ||||||| | | |||||| | ||||||| |||| ||||| | | ||||
Sbjct 1219135 CTTGAATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAG 1219194
Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
| || || || | |||| |||||||| |||||||| || || |||| |
Sbjct 1219195 CATTGAACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGT 1219254
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
| | |||||||| |||||||| || ||| ||||| || ||||| || | ||||| |
Sbjct 1219255 AAGTCTCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAG 1219314
Query 4903 TTACTTGAACTTC-GTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961
| ||||||||| | | |||| | ||||| || ||||| || || ||||| |||
Sbjct 1219315 GAATTTGAACTTCTGCTGAGAAAT-TCTCTACCAAATTTTCATTAACGATACCATCAGAA 1219373
Query 4962 GCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---T 5016
|| || ||||| ||||| | | ||| || ||| | || ||| | || | | |
Sbjct 1219374 GCGGCGAAAAATGCCAAGACCCTTGAAATGAAAAAT-CT-TTCATTCTCGTTCATTCTAT 1219431
Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||| | | | ||| || | | ||| | ||||||| |||||||||| || ||||
Sbjct 1219432 TATTCCAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTT 1219491
Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
| ||| | ||||| |||||| ||| |||| | || |||| || ||||||||
Sbjct 1219492 CTGCTCTCTTGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT 1219549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049360585318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |