Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq41 302 4e-77 >seq41 Length=1599359 Score = 302 bits (334), Expect = 4e-77 Identities = 614/898 (68%), Gaps = 19/898 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || || || ||||| |||| ||| |||||||| ||||| || || | || Sbjct 1218660 ACACCAGCCTTCTGATAATCGGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAT 1218719 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATG-TTTTTCACACTTTAG 4366 ||||| |||||||| |||||||| ||||| || ||||| ||| ||||| || | | Sbjct 1218720 GAAATGTTTTCCATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCTAA- 1218778 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | | || ||||| |||||||| | || ||| |||| || ||| || || Sbjct 1218779 AGCGACTAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCAT 1218838 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | ||| || || | || | | ||| | || ||| || || ||||| Sbjct 1218839 ACCCAATAACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTC 1218898 Query 4487 TGTGATTATATCTTTTAT--TTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 ||||| || | || ||| || || || |||||||||| || | | || || Sbjct 1218899 GGTGATAATCTTTTCTATAATTGATGGTTC--TGGTTTATTTTTCAAATGAGCGAATAAC 1218956 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| |||||||| ||| |||||||| ||||||| ||||| || || ||||| || Sbjct 1218957 AAACAAGCAAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTC 1219016 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||||||||| |||| || | |||||| ||||| ||||| || ||||| ||| Sbjct 1219017 AAACCAGGCATTAAACCCTTCTTCTTTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAG 1219076 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT--TGT 4722 || || ||||| | || ||||| || ||||||| |||| | || || | | Sbjct 1219077 AAAATACCTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAA--AATTGCATTGCTAT 1219134 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| ||||||| | | |||||| | ||||||| |||| ||||| | | |||| Sbjct 1219135 CTTGAATCCATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAG 1219194 Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 | || || || | |||| |||||||| |||||||| || || |||| | Sbjct 1219195 CATTGAACAAGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGT 1219254 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | | |||||||| |||||||| || ||| ||||| || ||||| || | ||||| | Sbjct 1219255 AAGTCTCAGAATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAG 1219314 Query 4903 TTACTTGAACTTC-GTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | ||||||||| | | |||| | ||||| || ||||| || || ||||| ||| Sbjct 1219315 GAATTTGAACTTCTGCTGAGAAAT-TCTCTACCAAATTTTCATTAACGATACCATCAGAA 1219373 Query 4962 GCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---T 5016 || || ||||| ||||| | | ||| || ||| | || ||| | || | | | Sbjct 1219374 GCGGCGAAAAATGCCAAGACCCTTGAAATGAAAAAT-CT-TTCATTCTCGTTCATTCTAT 1219431 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 | ||||| | | | ||| || | | ||| | ||||||| |||||||||| || |||| Sbjct 1219432 TATTCCAATCATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTT 1219491 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 | ||| | ||||| |||||| ||| |||| | || |||| || |||||||| Sbjct 1219492 CTGCTCTCTTGTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCT 1219549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049360585318