Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq27 563 1e-155 seq41 223 5e-53 >seq27 Length=921605 Score = 563 bits (624), Expect = 1e-155 Identities = 1498/2262 (66%), Gaps = 61/2262 (3%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 ||||||| | ||| || ||||| | | ||| || | || ||| | || || ||||||| Sbjct 394098 TCTTATCAATTGTGAATTGAATAGCTGCAGAAGCTGCTTGTGTTCTCAGGTAATACATAC 394157 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGA-ATAACTA 76889 | ||||| | |||| |||| ||||| || ||||| || |||| || || | Sbjct 394158 CTGTTTTCAATCCCATCTTCCAACCGTAAAAGTGCATACTGGTCAACTTACCCATCGTTG 394217 Query 76890 G-GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 | | ||| ||||||||||||| || ||| ||||||||| ||||| | | ||||| Sbjct 394218 GTGCACGG--ATATGAATATTCAAGGAGTGAGATTGATCGATAAAAGCAGCACGGTCAGC 394275 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 ||||||| || || ||||| | |||||||| | ||| ||| | | | ||| | Sbjct 394276 TGCCATTTCAATGATATGTTTTTGTGAGATTTCCCACACAGTCTTGTATAGCTCTTTCAA 394335 Query 77009 ATCATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 || | |||| ||| | ||||||||| |||||| |||| || || || || || Sbjct 394336 TTCCTGAGGAATGTTAGGTAGATTTTGAATAGAACCATTGTCTGTGATGAT-GTGTTGTT 394394 Query 77066 T-ATATCATCATTCCACAATTTCCTC---TCTGTTAAAACTCTAAGGAGATGAGGATTAA 77121 | ||| ||||| ||| | ||| | || ||| | | | | || ||||||| Sbjct 394395 TCATACTATCATCCCATA---TCCCCAAATCAACCAAATCACGTAACAAATACGGATTAA 394451 Query 77122 CTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 77181 | ||||||||||| |||||||| || | ||| | || || || ||| |||| || | Sbjct 394452 CGATTTGAAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGGCTCGA 394511 Query 77182 CAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATA 77241 | ||||||| | ||| |||||||||| || || ||||||||||| ||||||| | || Sbjct 394512 AACATTCATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAAGAGTA 394571 Query 77242 AACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT 77301 | ||| |||| ||||||| | ||||| | ||| | | | ||||||||| || | Sbjct 394572 GAGAATTCCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATCCCAGAGGT 394631 Query 77302 CTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCAT 77361 | | || || ||| | ||| ||||| | || || | | | | || || | Sbjct 394632 CGGTTGGCTTTGTATTCCACATATCATATTGCAAAACACCTTGAGAAACTGGAGAACCTT 394691 Query 77362 TATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGT 77421 ||| |||||||| || || ||| ||| ||| | |||||| | ||||||||| ||| Sbjct 394692 CATAGGTTTCATATGGACCATCTTTTTGAGCCAATTCACAGGATGATTCCAATGCGGCGT 394751 Query 77422 AATAAATTGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCAATACTATCAAACGGA 77480 |||||| ||||| || || | |||| | | ||||| || || | || || ||| Sbjct 394752 GATAAATGGTTTCAAAGATTTGAATATTCAAGTTCTTG-GCCTCTTGAGACTCGAATGGA 394810 Query 77481 TAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 | |||| | || || | ||| || || || | ||| || | | | |||||||| || Sbjct 394811 ACACGTAACATCATGAATGTATCAGCCAAACCATTAACACCTAGAGCGATAGGTCTGTGC 394870 Query 77541 CTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTG 77600 ||| | || || |||||||||| || |||||||| ||| ||| || | ||| || Sbjct 394871 CTCATGTTAGAGTTTTTAGCTTCAATAACTGGATAATAGTTACGGTCAATGACTTTGTTT 394930 Query 77601 AGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--------TC 77652 | ||| | | || || ||| | | || | ||| || ||| | | | || Sbjct 394931 AAATTACGAGTAATAACCTTAGCAATTTCGTGTAGCCTAGCAAAGTTATACCATTGGGTC 394990 Query 77653 TT-CCATCTATAAC-------AAACATGTT--CAAAGCTATAGATGCTAGATTACAAACT 77702 || |||||| | | ||| | | ||| || || || |||||||||||||| Sbjct 394991 TTACCATCTTCCGCTGTTTGAATACAGGATGGCAACGCAATGGAAGCTAGATTACAAACA 395050 Query 77703 GCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATA 77762 || ||||| | | |||| || || || ||||| ||| | |||||||| Sbjct 395051 GCAGTCTCATCTGGAGCAGAGTATTCTACAATTTCACAACATAAGTTAGAAGATTTGATA 395110 Query 77763 GTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGA 77822 || || | ||| | ||||| ||||| | || || | |||||||| || || || || Sbjct 395111 GTACCTAAATTCTTCTGGTTACTCTTCGTGTTACAAGCATCCTTATATAGCATGAATGGG 395170 Query 77823 GTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA 77882 || || |||||| | || | || | || | | ||| | ||| | |||| || Sbjct 395171 GTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGTACCACAATT-TCTGGGCTTTA--ATG 395227 Query 77883 GATTTG-TATCGCCTCTCTCTTTCATATTGAGTA--TATAGCCGTTCAAATTCATCTCCC 77939 | ||| || ||| | |||| | | || |||| | ||| || || || | Sbjct 395228 GTTTTTCTACCGCGACCCTCTGCAACGTAACGTTCGTATAACTCTTCGAACTCTTCGGCA 395287 Query 77940 CAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCC 77999 |||||||| | || || || |||| |||| | | ||| | ||| ||||| | ||| Sbjct 395288 TAAACATCAGCTAAACCTGGCGCTTCACTTGGAGAAAACAAGGTCCACTCACCGTTTTCT 395347 Query 78000 TTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTA 78059 | || |||||||| || | |||||| ||||| || || ||||| ||||| || | | Sbjct 395348 TGGACACGTTTCATGAATAAATCAGGAATCCAAAGTGCTGGAAATAAATCTCTGGCACGA 395407 Query 78060 TGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCAT 78119 |||||| || || ||| ||| ||| ||| | || || | ||| || | ||||||| Sbjct 395408 ATTTCTTCCTTACCGTGATTTTTTCTAATATCAATGAAATCGAAAATGTCTGCATGCCAT 395467 Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||||| || |||| || | | | || |||| ||| ||||| || || || | ||| | Sbjct 395468 GGTTCAAGGTATAAAGCAAAAGCGCCTGGTCTTTTGTTACCACCTTGGTCGACATAACGA 395527 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || || || ||| | |||| | ||| || || | ||||||||| || ||||| || || Sbjct 395528 GCAGTATTGTTAAAGACTCGAATCATGGGGATTAAACCGTTAGAGGTACCATTAGTACCT 395587 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGC 78295 | ||| || || | | ||||| || |||||||| ||| || || || || Sbjct 395588 GCAATGTAGGAACCGGTAGAACGAATGTT----ATGGATATGTAGCCCAATACCACCAGC 395643 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 | || || || | ||| || ||||| ||||| || || || || ||| || || Sbjct 395644 AGTTTTGGAAATCATAGCACATTCCTTCAAGGTATCATAAATTCCTTCAATAGAATCGTC 395703 Query 78356 CATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATA 78414 | |||| | || ||| ||||| ||||||||| | ||| ||| || || || |||| Sbjct 395704 CTTCATAGCTACTAAG-AAACATGAAGACATTTGTGGGTGAGGAGTACCAGCGTTGAATA 395762 Query 78415 ATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTG 78474 | || ||||||||||| | || | || ||| | | ||||| ||||| ||| | | Sbjct 395763 AAGTTGGAGATGCATGGATGAAATACCTTAGAGACATCAAGTTGTAAGTTTCTATAACGG 395822 Query 78475 ATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTT 78534 | | || || ||| || || || | ||| | ||| | | ||| ||||| | || Sbjct 395823 ACTTGATATCTGTACCATGGATACCAACTGATACTCTCATGATTAAATGTTGAGGACGTT 395882 Query 78535 CAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAAT 78594 || | || | ||| | ||| || || || |||||| || ||||| ||||| | Sbjct 395883 CAGCAACCTCACCATTCGTCCTCAGCAGATAAGAACGTTCCAATGTCTTAAATCCAAAGT 395942 Query 78595 AGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGG 78654 ||||| || ||| || || || || | ||| |||| |||| || || |||| || Sbjct 395943 AGTTGAATTGAAAATCCCTATCATAGACTATAGCAGAGTTTAATTCGTCCTTGTTTTCCA 396002 Query 78655 TAACAATATCCATGACAGTAGTT--GAAATAATAGGAGATCGTACACCATTTTTAGGATT 78712 |||| ||||| ||| | || ||||| |||||||| |||| |||||||| ||||| Sbjct 396003 TAACGATATCGTAGAC--TTCTTGAGAAATCATAGGAGAGTGTACCCCATTTTTTGGATT 396060 Query 78713 AACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAG 78772 |||||| | ||||||| || || | |||||||| |||||| || ||||| Sbjct 396061 CACATAGGAATATAAATCAGTAATAACTTGCGAGAATAGTTTCGTTGTTTGTTTATGTAG 396120 Query 78773 ATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT 78832 ||| || | || ||||| ||||||||| | |||||||||||||| || || || || Sbjct 396121 ATTCGAAATGGCAATTCTAGCAGCTAGAGTGGCATAATCAGGATGCACCGTTGT-CATGT 396179 Query 78833 -GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTC 78891 ||| | |||| || |||||| | ||||| || | ||| ||||| || | ||| | | Sbjct 396180 AGGCACATGTTTCAGCAGCTAAATTGTCTAATTCAACAGTAGTGACACCTTCATAGACAC 396239 Query 78892 CTTGAAT--AACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATA 78949 || ||| || || | | || ||||||| ||| | | | | || ||| ||||| Sbjct 396240 CTGAAATTATACGTTGA--GTTATCTTGACAGCATCAATATGAGCTGGGTCCAACCCATA 396297 Query 78950 ACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAAC 78991 |||||| | ||||| | ||||||||| |||||| |||| Sbjct 396298 ACATAAACGTGAGATACGGGCTGTGATTTTGTCAAATCTAAC 396339 >seq41 Length=1599359 Score = 223 bits (246), Expect = 5e-53 Identities = 585/875 (67%), Gaps = 32/875 (4%) Strand=Plus/Plus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT- 47929 |||||||| || ||||| || || ||||||| || |||||||| |||||||||||||| Sbjct 1218690 TTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCCATGAAATCAAATGGATTT 1218749 Query 47930 --AAC--TGCATTATAAAtttttttAAATCCTAATTCTGA--AATCAGTCTATCTGCAAC 47983 ||| || | ||| |||| ||| ||||| | || ||| |||||||| || || Sbjct 1218750 GTAACGTTGAA--ATACTTTTTGTTA---CCTAAAGC-GACTAAT-AGTCTATCAGCGAC 1218802 Query 47984 GAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAGTTTAACTGGTAGAG 48042 ||||| | ||| ||||| | || |||||| || | ||| || |||| | || Sbjct 1218803 AAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAACGATA-CTGGCAAAG 1218861 Query 48043 CCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTT 48102 | ||| | | | | || ||| || ||||| || || ||| | || || Sbjct 1218862 CATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCTTTTCTATAATTG 1218921 Query 48103 CCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGAC 48162 |||| || |||||| || | ||||| |||||||| ||| | || Sbjct 1218922 ATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAATCTGTATGTAAAC 1218981 Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| | ||| || || || ||||| || | ||| ||||||| || || | Sbjct 1218982 CTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATTAAACCCTTCTTCT 1219041 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | |||||| || || || || || ||||| ||||| || ||||| | || ||||||| Sbjct 1219042 TTAACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCAATTGCAGCAAATG 1219101 Query 48283 CGGTAAGTCTCTCTCCGTAACTGGCTTCG---TTGTGTATCCACCGTTGTGCCCAATCAG 48339 | | ||| || || || | || | | | || ||||| | |||||| || | Sbjct 1219102 CAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCATCTAATTGCCCATTCTG 1219161 Query 48340 CCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||| |||||| | || || | || |||||||| || | || | |||| || Sbjct 1219162 -CTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAGAAATCACTTTCCTTT 1219220 Query 48399 CTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATATTTTCAA 48456 ||||| | |||||||| || | ||||| || | || || ||||||||||| | Sbjct 1219221 GGGTCTTTGATATAAGTATCGATCAGTAAAGA--GTAAGTCTCAGAATGAATATTTTCCA 1219278 Query 48457 TTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC--CTCCGTACAAAA 48514 | || ||||| || |||||||| | ||||| | || || || || | | ||| Sbjct 1219279 TCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACTTCTGCTGAGAAAT 1219338 Query 48515 TCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATG 48574 || || ||||||| ||||| || || |||||| ||| || |||||||| || || Sbjct 1219339 TC--TCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAATGCCAAGACCCT 1219396 Query 48575 TTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGA 48631 | ||| ||| || |||| || ||| | |||||||| |||| ||||| ||||| Sbjct 1219397 TGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTCCAATCATGTATATCCTTTGA 1219456 Query 48632 TATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | ||| | ||||||||| |||||||| || || |||||| | || || | ||| || Sbjct 1219457 AAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGTAAGCTTGCCAAAT 1219516 Query 48692 ATCACTGTATTGGATTGGGAAAATAACAAATCTAT 48726 ||| |||| |||||| || | ||||||||||| Sbjct 1219517 TTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668400565440