Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq27 524 1e-143 seq41 275 9e-69 >seq27 Length=921605 Score = 524 bits (580), Expect = 1e-143 Identities = 1485/2254 (66%), Gaps = 57/2254 (3%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 ||||||| | ||||| ||||| | | || |||| || ||| | || || ||||||| Sbjct 394098 TCTTATCAATTGTGAATTGAATAGCTGCAGAAGCTGCTTGTGTTCTCAGGTAATACATAC 394157 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTC 75484 | ||||| | |||| |||| ||||| || ||||| || || | || || | Sbjct 394158 CTGTTTTCAATCCCATCTTCCAACCGTAAAAGTGCATACTGGTCAACTTACCCATCGTTG 394217 Query 75485 G-GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 | | ||| ||||||||||||| || ||| ||||||||| ||||| | | ||||| Sbjct 394218 GTGCACGG--ATATGAATATTCAAGGAGTGAGATTGATCGATAAAAGCAGCACGGTCAGC 394275 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||||| || || ||||| | |||||||| | ||| ||| | | | ||| | Sbjct 394276 TGCCATTTCAATGATATGTTTTTGTGAGATTTCCCACACAGTCTTGTATAGCTCTTTCAA 394335 Query 75604 ATCATCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || | |||| || | ||||||||| || || || | || || || || || Sbjct 394336 TTCCTGAGGAATGTTAGGTAGATTTTGAATAGAACCATTGTCTGTGATGAT-GTGTTGTT 394394 Query 75661 G-ATCTCATCATTCCACAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGAGGATTAA 75716 || ||||| ||| | | | | || ||| | | | | || ||||||| Sbjct 394395 TCATACTATCATCCCATA---TCCCCAAATCAACCAAATCACGTAACAAATACGGATTAA 394451 Query 75717 CAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCA 75776 | ||||||||||| |||||||| || | || | || || || ||| |||| || | Sbjct 394452 CGATTTGAAATTCACCAGACAAAACACGACGGGAATACATGTTCGAGGTGAATGGCTCGA 394511 Query 75777 CAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATA 75836 | ||||||| | ||| |||||||||| ||||| ||||| ||||| ||||||| | || Sbjct 394512 AACATTCATTATATCCTAAAATTTGAGATGTTGATGCAGTTGGCATTGGTGCCAAGAGTA 394571 Query 75837 AACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT 75896 | ||| |||| ||||||| | ||||| | ||| | | | ||||||||| || | Sbjct 394572 GAGAATTCCTGATACCATGTTCCTTAATTTTCTGTTTCAAAGTGTCCCAATCCCAGAGGT 394631 Query 75897 CTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATG---ATC 75953 | | ||| || ||| | ||| ||||| | || || ||| || | || | | Sbjct 394632 CGGTTGGCTTTGTATTCCACATATCATATTGCAAAACACC-TTG--AGAAACTGGAGAAC 394688 Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013 | | ||| ||||| || | || || |||| ||| | ||| || | || || || Sbjct 394689 CTTCATAGGTTTCATATGGACCATCTTTTTGAGCCAATTCACAGGATGATTCCAATGCGG 394748 Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCAAAA 76072 ||| |||||| ||||| || || | |||| ||| ||||| || || || || || Sbjct 394749 CGTGATAAATGGTTTCAAAGATTTGAATATTCAAGTTCTTG-GCCTCTTGAGACTCGAAT 394807 Query 76073 GGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTA 76132 ||| | |||| | || |||| ||| || | || | ||| || | | | |||||||| Sbjct 394808 GGAACACGTAACATCATGAATGTATCAGCCAAACCATTAACACCTAGAGCGATAGGTCTG 394867 Query 76133 TGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTA 76192 || ||| | || || ||| |||||| || || ||||| ||| || || | ||| Sbjct 394868 TGCCTCATGTTAGAGTTTTTAGCTTCAATAACTGGATAATAGTTACGGTCAATGACTTTG 394927 Query 76193 TTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT------ 76246 || | ||| | || || ||| | | || | ||| | ||| | | | Sbjct 394928 TTTAAATTACGAGTAATAACCTTAGCAATTTCGTGTAGCCTAGCAAAGTTATACCATTGG 394987 Query 76247 ---TTTCCATCTATCACA-----AACATATTAAGA----GCTATAGATGCTAGATTACAA 76294 || |||||| | | || | | | | || || || |||||||||||| Sbjct 394988 GTCTTACCATCTTCCGCTGTTTGAATACAGGATGGCAACGCAATGGAAGCTAGATTACAA 395047 Query 76295 ACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTG 76354 || || ||||| | | | |||| || || || |||| ||| | | ||| Sbjct 395048 ACAGCAGTCTCATCTGGAGCAGAGTATTCTACAATTTCACAACATAAGTTAGAAGATTTG 395107 Query 76355 ATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAAC 76414 ||||| || | ||| | ||||| ||||| ||||||| | |||||||| || | || Sbjct 395108 ATAGTACCTAAATTCTTCTGGTTACTCTTCGTGTTACAAGCATCCTTATATAGCATGAAT 395167 Query 76415 GGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATT 76474 || || ||||||||| | || | || | || | | ||| | ||| | |||| Sbjct 395168 GGGGTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGTACCACAATT-TCTGGGCTTTA-- 395224 Query 76475 ATAGATTTG-TATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCATCT 76531 || | ||| || ||| | |||| | || || |||||| ||| || || || Sbjct 395225 ATGGTTTTTCTACCGCGACCCTCTGCAACGTAACGTTCGTATAACTCTTCGAACTCTTCG 395284 Query 76532 CCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCT 76591 | |||||||| | ||||| || |||| | ||| | | ||| | ||||||||| | | Sbjct 395285 GCATAAACATCAGCTAAACCTGGCGCTTCACTTGGAGAAAACAAGGTCCACTCACCGTTT 395344 Query 76592 TCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 76651 || | || |||||||| || | |||||| ||||| || || ||||| ||||| || Sbjct 395345 TCTTGGACACGTTTCATGAATAAATCAGGAATCCAAAGTGCTGGAAATAAATCTCTGGCA 395404 Query 76652 CTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGC 76711 | | |||||| || || ||| ||| ||| ||| | ||| || | ||| || | |||| Sbjct 395405 CGAATTTCTTCCTTACCGTGATTTTTTCTAATATCAATGAAATCGAAAATGTCTGCATGC 395464 Query 76712 CATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATAT 76771 |||||||| || |||| || | | | || |||| ||| ||||| || || || | ||| Sbjct 395465 CATGGTTCAAGGTATAAAGCAAAAGCGCCTGGTCTTTTGTTACCACCTTGGTCGACATAA 395524 Query 76772 CTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTT 76831 | ||||| || ||| | |||| | ||| || || | |||||||| |||||||| || Sbjct 395525 CGAGCAGTATTGTTAAAGACTCGAATCATGGGGATTAAACCGTTAGAGGTACCATTAGTA 395584 Query 76832 CCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 || | ||| || || | |||||| ||| ||| ||| || || || || || Sbjct 395585 CCTGCAATGTAGGAACCGGTAGAACGAATGTTATGGATATGTAGCCCAATACCACCAGCA 395644 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 |||| || || | |||||| ||||| || ||||| || || || ||| ||| ||| Sbjct 395645 GTTTTGGAAATCATAGCACATTCCTTCAAGGTATCATAAATTCCTTCAATAGAATCGTCC 395704 Query 76952 ATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAA 77010 |||| | || ||| ||||| ||||||||| | ||| ||| || || || || || Sbjct 395705 TTCATAGCTACTAAG-AAACATGAAGACATTTGTGGGTGAGGAGTACCAGCGTTGAATAA 395763 Query 77011 TGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGC 77070 || ||||||||||| |||| | || ||| | | ||||| ||||| ||||| | Sbjct 395764 AGTTGGAGATGCATGGATGAAATACCTTAGAGACATCAAGTTGTAAGTTTCTATAACGGA 395823 Query 77071 TTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 | ||||| ||| || || || | || | ||| | | ||| ||||| ||||| Sbjct 395824 CTTGATATCTGTACCATGGATACCAACTGATACTCTCATGATTAAATGTTGAGGACGTTC 395883 Query 77131 TACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190 || || | ||| | ||| || || || |||||| || ||||| ||||| || Sbjct 395884 AGCAACCTCACCATTCGTCCTCAGCAGATAAGAACGTTCCAATGTCTTAAATCCAAAGTA 395943 Query 77191 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGT 77250 |||| || ||| || || || || | ||| | || |||| || |||||| | || | Sbjct 395944 GTTGAATTGAAAATCCCTATCATAGACTATAGCAGAGTTTAATTCGTCCTTGTTTTCCAT 396003 Query 77251 AACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAAC 77310 ||| ||||| ||| |||||| || ||||| ||| |||||||| ||||| || Sbjct 396004 AACGATATCGTAGACTTCTTGAGAAATCATAGGAGAGTGTACCCCATTTTTTGGATTCAC 396063 Query 77311 ATAGTTAAATAAGTCTTCCATTACGTCGCTA-AATAGtttttttGTTTCCTTGTGTAGAT 77369 |||| | |||| || || || | || | |||||||| |||||| || ||||||| Sbjct 396064 ATAGGAATATAAATCAGTAATAAC-TTGCGAGAATAGTTTCGTTGTTTGTTTATGTAGAT 396122 Query 77370 TCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-G 77428 |||| | ||| ||||||||||||||| | ||||| |||||||| || || || || | Sbjct 396123 TCGAAATGGCAATTCTAGCAGCTAGAGTGGCATAATCAGGATGCACCGTTGT-CATGTAG 396181 Query 77429 GCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCT 77488 || | |||| || |||||| | |||||||| | |||||| || || | ||| | ||| Sbjct 396182 GCACATGTTTCAGCAGCTAAATTGTCTAATTCAACAGTAGTGACACCTTCATAGACACCT 396241 Query 77489 TGAAT--AACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAAC 77546 ||| || || | | ||| |||| || ||| | | | | || ||| ||||||| Sbjct 396242 GAAATTATACGTTGA--GTTATCTTGACAGCATCAATATGAGCTGGGTCCAACCCATAAC 396299 Query 77547 ATAATTTTCTAATACGAGATGTGATTTTATCAAA 77580 |||| | ||||| | ||||||||| ||||| Sbjct 396300 ATAAACGTGAGATACGGGCTGTGATTTTGTCAAA 396333 >seq41 Length=1599359 Score = 275 bits (304), Expect = 9e-69 Identities = 594/873 (68%), Gaps = 28/873 (3%) Strand=Plus/Plus Query 46360 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTA 46419 |||||||| || ||||| || || ||||||| || |||||||| |||||||| ||||| Sbjct 1218690 TTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTTTTCCATGAAATCAAATGGATTT 1218749 Query 46420 GTAACATT---ATAAAtttttttAAATCCTAATTCTGA--AATCAGTCTATCTGCAACGA 46474 ||||| || ||| |||| ||| ||||| | || ||| |||||||| || || | Sbjct 1218750 GTAACGTTGAAATACTTTTTGTTA---CCTAAAGC-GACTAAT-AGTCTATCAGCGACAA 1218804 Query 46475 ATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCT 46534 |||| | || ||||| | || |||||| || | | || || | ||| | Sbjct 1218805 ATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAATAACGATACTGGCAAAGCAT 1218864 Query 46535 CCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCT 46594 || | | | | || |||||| ||||| || | || ||| | || | || | Sbjct 1218865 CCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGATAATCTTTTCTA-TAATTGAT 1218923 Query 46595 CACT-TGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCT 46653 | |||| || ||||||| || | ||||| |||||||| ||| | ||| Sbjct 1218924 GGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGCAAAATCTGTATGTAAACCT 1218983 Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| | ||| || || || ||||| || | |||||||||| || ||| || Sbjct 1218984 TCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGGCATTAAACCCTTCTTCTTT 1219043 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | |||||| ||||| || || || ||||| ||||| || ||||| | || || ||||| Sbjct 1219044 AACCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATACCTTCAATTGCAGCAAATGCA 1219103 Query 46774 ACAAGTCTCTCTCCGTAACTGGCAT---CATTATGAATCCACCTTTGAGCCCAATCAGCC 46830 || | ||| || || || | |||| || |||||||| || ||||| || | | Sbjct 1219104 ACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCCATCTAATTGCCCATTCTG-C 1219162 Query 46831 TTTTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACT 46889 ||||||||| | || || | || |||||||| || | || | |||| | Sbjct 1219163 TTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACAAGAAATCACTTTCCTTTGG 1219222 Query 46890 ATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 ||||| | ||| ||||| || | ||||| || | || |||||||| ||||| || Sbjct 1219223 GTCTTTGATATAAGTATCGATCAGTAAAGA--GTAAGTCTCAGAATGAATATTTTCCATC 1219280 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG--TACAAAATC 47005 || ||||| || |||||||| | ||||||| ||| || || |||| | ||| || Sbjct 1219281 ATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAACTTCTGCTGAGAAATTC 1219340 Query 47006 GTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTT 47065 || |||||| ||||| || || |||||| ||| || ||||||||||| || | Sbjct 1219341 --TCTACCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAAAATGCCAAGACCCTTG 1219398 Query 47066 TAATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 47122 ||| ||| || ||||| ||| | | |||||||| |||| ||||| ||||| | Sbjct 1219399 AAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTCCAATCATGTATATCCTTTGAAA 1219458 Query 47123 TATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATAT 47182 ||| | ||||||||| ||||| || || || |||||| | || || | ||| || | Sbjct 1219459 GATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTTGTAAGCTTGCCAAATTT 1219518 Query 47183 CACGATATTGGATCGGAAAAATAACAAATCTAT 47215 || |||||| ||| ||||| | ||||||||||| Sbjct 1219519 CATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933990062720