Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 2e-15 seq43 93.3 1e-13 >seq19 Length=616425 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | || | |||||| || ||||||||||||||||| | ||| ||||| || Sbjct 593018 TCTCAAGACTAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGATAAGGTTCTACC 593077 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | ||| || || ||||| | || || ||||| | | || |||||||| Sbjct 593078 ATCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 593137 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | |||| ||| || ||||| | ||||| Sbjct 593138 GTCTTGGATCTTAGACTTGACATTATCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 593197 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || | ||| || || || | ||||| || Sbjct 593198 GGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATCTT 593236 >seq43 Length=816610 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || |||||||| || || || || | | |||||| ||||| || | Sbjct 809208 CAAG-TGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCA 809266 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| || | ||||||||||| | | || || ||||| ||||||| Sbjct 809267 GTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAA 809326 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| | || | | |||| || || || || || || ||||| || | Sbjct 809327 TTTTAGATTTGACGTTATCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATAGTCTTAC 809386 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||| || || |||| ||||| Sbjct 809387 CTGTCAAAGTTTTGACAAAGATTTGCAT 809414 Score = 93.3 bits (102), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || |||||||| || || || || | | |||||| ||||| || | Sbjct 812856 CAAG-TGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCA 812914 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| || | ||||||||||| | | || || ||||| || |||| Sbjct 812915 GTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAA 812974 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| | || | | |||| || || || || | |||||||| || | Sbjct 812975 TTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTAC 813034 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | || || ||||||| ||||| || Sbjct 813035 CTGTCAACGTTTTAACGAAGATTTGCATGTT 813065 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || |||||||| || || || || | | |||||| ||||| || | Sbjct 812628 CAAG-TGCAGTGTGGATTCTTTTTGAATATTATAGTCAGACAGAGTTCTGCCATCCTCCA 812686 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| || | ||||||||||| | | || || ||||| || |||| Sbjct 812687 GTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAA 812746 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| | || | | |||| || || || || | |||||||| || | Sbjct 812747 TTTTAGATTTGACATTGTCAATGGTGTCCGAGGATTCCACCTCCAACGTAATAGTCTTAC 812806 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || || || | ||||| Sbjct 812807 CTGTCAACGTTTTGACAAATATTTGCAT 812834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820119966866