Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq41 282 4e-71 >seq41 Length=1599359 Score = 282 bits (312), Expect = 4e-71 Identities = 606/890 (68%), Gaps = 17/890 (2%) Strand=Plus/Plus Query 23218 TTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 || ||||| || ||| | |||| ||||| || || |||||||| | ||||| || || Sbjct 1218669 TTCTGATAATCGGAAACTC-TCTTCTCGAAGAAGTTAGTCTTACCAGCCAATGAAATGTT 1218727 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATT-ATATACAGCTT--TACATGATAATTCCTT 23333 |||||| |||||||||||||| | | || | |||| || ||| | || | Sbjct 1218728 TTCCATGAAATCAAATGGATTTGTAACGTTGAAATACTTTTTGTTACCT---AAAGCGAC 1218784 Query 23334 TAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTAT 23393 ||| || ||||| || |||||||||| ||||| ||| | ||| || ||||| | Sbjct 1218785 TAATAGTCTATCAGCGACAAATTCAACGTATTGGTTCATTAGATCGGCATTCATACCCAA 1218844 Query 23394 TAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAAT 23453 || |||||| | ||||| || || ||||||||| |||||| || | || Sbjct 1218845 TAACGATACTGGCAAAGCATCCATGAAATATCTTTTTTCAATTTCAACAGCTTCGGTGAT 1218904 Query 23454 TATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGC 23513 || | | |||| | | ||| || ||| |||| || || ||||| || Sbjct 1218905 AATCTTTTCTATAATTGATGGTTCTGGTTTATTTTTCAAATGAGCGAATAACAAACAAGC 1218964 Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573 |||||| ||||| |||||||| || | |||||| ||||| ||||| || || || || Sbjct 1218965 AAAATCTGTATGTAAACCTTCATCTCTGCAAATCAACTCATTTGAAAAGGTCAAACCAGG 1219024 Query 23574 CATTAATCC-TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATAC 23632 |||||| || | || ||||| |||||| || |||||||| || || || |||||||||| Sbjct 1219025 CATTAAACCCTTCTTCTTTAA-CCAAAAGATAGCAGCAAAGGAACCAGAGAAGAAAATAC 1219083 Query 23633 CCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCC 23692 | |||| || ||||| || || | | | | | || ||||||| ||| ||||| Sbjct 1219084 CTTCAATTGCAGCAAATGCAACTAATCTTTCAGCGAAAATTGCATTGCTATCTTGAATCC 1219143 Query 23693 AtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGA 23752 || | ||| ||| | || || ||| | ||| | || || || || || | Sbjct 1219144 ATCTAATTGCCCATTCTGCTTTTTCTTTAATTTGTGGAATATTATCGATAGCATTGAACA 1219203 Query 23753 GAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAG 23812 ||| |||| | ||| | ||||| ||||| || |||||| || | |||| Sbjct 1219204 AGAAATCACTTTCCTTTGGGTCTTTGATATAAGTATCGATCAGTAAAGAGTAAGTCTCAG 1219263 Query 23813 AATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAA 23872 ||||||||||||| || ||| ||||||||||||||||| | ||||||| | ||||| Sbjct 1219264 AATGAATATTTTCCATCATAATTTGAAACCCATAAAAACACTTGGCTTCAGGAATTTGAA 1219323 Query 23873 CATC-ATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAG 23931 | || | | |||| | || | |||||||| ||||| ||||||||| ||| || || Sbjct 1219324 CTTCTGCTGAGAAATTCTCTA-CCAAATTTTCATTAACGATACCATCAGAAGCGGCGAAA 1219382 Query 23932 AAAG-CAAGAACATATTTTATAAAATGTCTTTCAT--CAGTTGATAAT-TTTTTCCAATC 23987 || | ||||| | | | || ||| |||||||| ||| || | || |||||||| Sbjct 1219383 AATGCCAAGACCCT-TGAAATGAAAAATCTTTCATTCTCGTTCATTCTATTATTCCAATC 1219441 Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTT 24047 || ||||| ||||| | ||| | ||| ||| | ||||||||| || || | ||| Sbjct 1219442 ATGTATATCCTTTGAAAGATCGATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTCTCTT 1219501 Query 24048 ATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTAT 24097 || | ||||||| |||| || || |||||||||| || ||||||| Sbjct 1219502 GTAAGCTTGCCAAATTTCATGATATTTGATTGGAAATAAAACAAATCTAT 1219551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487700144400