Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 3e-26
>seq1
Length=2974285
Score = 134 bits (148), Expect = 3e-26
Identities = 321/472 (68%), Gaps = 14/472 (3%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAGTTT 230231
|||| ||| ||||| || || | | ||||||||||||| | || | | ||| |
Sbjct 232867 TTTGGCGAACGTCTTGTTGCATTTGCTGCTGTTGAAGGTATTTTCTT--CAGTGGATCGT 232924
Query 230232 CTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290
||| ||||||||||| || ||| | ||| |||||||||| | | | || ||||
Sbjct 232925 TTGCATCCATCTTTTGGTTGAAGAAGAGAGGCTTGATGCCTGGTTTGACTTTCTCCAACG 232984
Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA--A 230348
|||| ||| | || || |||||| | || || | || || |||| | ||||| |
Sbjct 232985 AGTTAATCTGCCGTGATGAGGGTTTGCA-CACCGATTTTGCTTGCTTGT-TATTCTCCCA 233042
Query 230349 GCTCCAGAACAAGCTACCATTC-GAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407
| || |||| | | || | | | ||| | | || || ||||| || |||| |
Sbjct 233043 CTTGCAAAACAGACC-CGATGCTGCTATTGTCGAGAAGATTATCACAGAGGCCGTTGCTA 233101
Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCC-ATGTCGCCTTATTGGC-ATGAACGCTGA 230465
||||||||||| | ||| ||| | || || ||| || |||| |||||| | |
Sbjct 233102 TTGAAAAGGAGTTTTTCACTGATGCTTTGCCTATTTCG--TTGTTGGGTATGAACTGTAA 233159
Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
| | ||| | |||||| | || || || |||||| | | |||| ||| | || ||||
Sbjct 233160 ATTGATGTGCCAGTACGTGGAGTTTGTTGCCGACAGATTACTTGTCGCATTAGGCAACGA 233219
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
|| || ||||| || || ||||||| |||||||| ||||||| | ||| ||
Sbjct 233220 AAAGGTTTACAATGTTACTAATCCCTTTGACTTTATGGAAAACATTTCGTTGGCAGGAAA 233279
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||| ||||||||| | || |||||||| || | | ||||||| |||
Sbjct 233280 GACCAACTTTTTCGAAAAGAGAGTTAGTGACTACCAAAAGGCTGGTGTTATG 233331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823728932600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |