Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 >seq1 Length=2974285 Score = 134 bits (148), Expect = 3e-26 Identities = 321/472 (68%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAGTTT 230231 |||| ||| ||||| || || | | ||||||||||||| | || | | ||| | Sbjct 232867 TTTGGCGAACGTCTTGTTGCATTTGCTGCTGTTGAAGGTATTTTCTT--CAGTGGATCGT 232924 Query 230232 CTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290 ||| ||||||||||| || ||| | ||| |||||||||| | | | || |||| Sbjct 232925 TTGCATCCATCTTTTGGTTGAAGAAGAGAGGCTTGATGCCTGGTTTGACTTTCTCCAACG 232984 Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA--A 230348 |||| ||| | || || |||||| | || || | || || |||| | ||||| | Sbjct 232985 AGTTAATCTGCCGTGATGAGGGTTTGCA-CACCGATTTTGCTTGCTTGT-TATTCTCCCA 233042 Query 230349 GCTCCAGAACAAGCTACCATTC-GAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407 | || |||| | | || | | | ||| | | || || ||||| || |||| | Sbjct 233043 CTTGCAAAACAGACC-CGATGCTGCTATTGTCGAGAAGATTATCACAGAGGCCGTTGCTA 233101 Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCC-ATGTCGCCTTATTGGC-ATGAACGCTGA 230465 ||||||||||| | ||| ||| | || || ||| || |||| |||||| | | Sbjct 233102 TTGAAAAGGAGTTTTTCACTGATGCTTTGCCTATTTCG--TTGTTGGGTATGAACTGTAA 233159 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 | | ||| | |||||| | || || || |||||| | | |||| ||| | || |||| Sbjct 233160 ATTGATGTGCCAGTACGTGGAGTTTGTTGCCGACAGATTACTTGTCGCATTAGGCAACGA 233219 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 || || ||||| || || ||||||| |||||||| ||||||| | ||| || Sbjct 233220 AAAGGTTTACAATGTTACTAATCCCTTTGACTTTATGGAAAACATTTCGTTGGCAGGAAA 233279 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| ||||||||| | || |||||||| || | | ||||||| ||| Sbjct 233280 GACCAACTTTTTCGAAAAGAGAGTTAGTGACTACCAAAAGGCTGGTGTTATG 233331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823728932600