Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=1507273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 18788 GGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 ||| ||| | || ||| |||| || || || ||| | ||||||||||| ||||| ||||| Sbjct 987377 GGGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCGAATACAAAGA 987318 Query 18848 CTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAAT 18907 |||| | || |||| | | || | |||||||| || ||||||| | | | Sbjct 987317 CTGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTATAAACAAGCT 987258 Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967 |||| |||||| | ||| |||| || || ||| ||||||| || ||| || Sbjct 987257 CAAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTGCAGATTTCAG 987198 Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTT 19013 ||||| |||||||||| || || || |||||||| ||| Sbjct 987197 TAAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTT 987152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503902620900