Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq6 84.2 2e-11
>seq6
Length=1507273
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 18788 GGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847
||| ||| | || ||| |||| || || || ||| | ||||||||||| ||||| |||||
Sbjct 987377 GGGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCGAATACAAAGA 987318
Query 18848 CTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAAT 18907
|||| | || |||| | | || | |||||||| || ||||||| | | |
Sbjct 987317 CTGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTATAAACAAGCT 987258
Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967
|||| |||||| | ||| |||| || || ||| ||||||| || ||| ||
Sbjct 987257 CAAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTGCAGATTTCAG 987198
Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTT 19013
||||| |||||||||| || || || |||||||| |||
Sbjct 987197 TAAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTT 987152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503902620900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |