Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 4e-13
seq1 82.4 6e-11
>seq7
Length=860703
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| || || || || || || || ||| || ||| | |
Sbjct 37633 ATGCAAATTTTCGTCAAGACCTTAACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 37692
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| || || |||||| | ||| || ||
Sbjct 37693 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCCCCTGACCAG 37752
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || ||||| || || |||||||| || | ||| | | || |||||
Sbjct 37753 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGACGGCCGTACTCTTTCTGACTACAAC 37812
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| |||||||| |||||||||||| ||||||| |||| |||| ||
Sbjct 37813 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 37859
>seq1
Length=2974285
Score = 82.4 bits (90), Expect = 6e-11
Identities = 154/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| || |||| || ||||| || ||||| |||||| || ||| || |
Sbjct 1361273 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAAACTATTACCCTTGAGGTTGAATCCTCT 1361214
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| || || || ||| | || ||| ||
Sbjct 1361213 GACACTATTGACAAYGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 1361154
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||| | || || || || || ||||| |||||| || ||| | | || ||||||
Sbjct 1361153 CAGAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGCAGAACGTTATCAGACTACAAT 1361094
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| ||||| ||||| ||||| | || || |||| |||| ||
Sbjct 1361093 ATTCAGAAGGAGTCTACACTTCATCTTGTATTGAGATTGAGAGGTGG 1361047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796699868280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |