Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 2e-49
>seq1
Length=2974285
Score = 210 bits (232), Expect = 2e-49
Identities = 589/889 (66%), Gaps = 29/889 (3%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||||||||||||||||| || || || || |||||| | || ||||| |||
Sbjct 233318 TTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTTCCTGCCAACGAAATGTTT 233259
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060
|||||||| ||||| ||||| | ||| || ||| || ||| || ||| | |
Sbjct 233258 TCCATAAAGTCAAAGGGATTAGT--AAC-ATTGTAAACCTTTTCGTTGCCTAATGCGACA 233202
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
| |||||| || || ||||| || | ||||| ||| || | ||||||||| || |
Sbjct 233201 AGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAATTTACAGTTCATACCCAAC 233142
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| || ||| | || || || ||||| | ||||| ||| ||| || || ||||
Sbjct 233141 AACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATAGCAACGGCCTCTGTGATA 233082
Query 16181 ATATCTCTTACTACACTA--TTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237
|| | ||| | ||| || | | || |||| ||||| || | | |||
Sbjct 233081 ATCT-TCT--CGACAATAGCAGCATCGGGTCTGTTTTGCAAGTGGGAGAATAACAAGCAA 233025
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
|||||||| ||||| || || || | | ||||||||||| || || || | |||
Sbjct 233024 GCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGTTGGAGAAAGTCAAACCA 232965
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | |||| || || | |||||| || | ||||| || ||| ||||| |||
Sbjct 232964 GGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACGATCCACTGAAGAAAATA 232905
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACC--GTACGTTCT-Atttttactttct 16414
|||||||| || ||||||||||| | || || || || | || | | |||
Sbjct 232904 CCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAGGCCTCGTCATCACT---G 232848
Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474
||||| | |||||| | || || | ||| | || || |||| || |||||
Sbjct 232847 ATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAGTCTCAATAGCATTG 232788
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
|||||| | | | || ||| || ||||| || || || | || || |
Sbjct 232787 AATAAAAAGTCTGCCTCCTTGGGGTCCTTGATATAGGTGTCGATCAACAAGGAGTAGGTC 232728
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
||||| || ||||| ||||| || || ||||| ||||||||| | ||||| | ||
Sbjct 232727 TCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCATTTGGCTTCTGGAATC 232668
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| || || | | || | || | ||||| |||||||| || |||||| ||| ||
Sbjct 232667 TGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAATACCATCGGAAGCAGCG 232608
Query 16655 AAAAACGC--AAGTATGTG--TTTAATAAA--AtttttttCGTT-ATCTGAAAGTTTTAA 16707
||||| || || || | | | || ||| | || ||||| | || |||
Sbjct 232607 AAAAATGCCAAAATACGGGAAATGAAGAAACGCTCGTTGTCGTTCAAGCGATTGTT---- 232552
Query 16708 CCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGC 16767
||||||| | |||||| ||||||| || ||| ||||||||||||| || | ||
Sbjct 232551 CCAGTCATGAGTGTCTTTTCCCAAATCGATTTCCTCTGCAGTCCAAAAAGATGCTTCTGC 232492
Query 16768 CTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816
|| || ||||||| ||| || || | ||| |||||| || | ||||
Sbjct 232491 TTTCTTGTACATTTGCCAAATCTCGTGGTATTTAATAGGGAAAAGAACA 232443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511884372000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |