Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq6 152 4e-32
>seq6
Length=1507273
Score = 152 bits (168), Expect = 4e-32
Identities = 293/434 (68%), Gaps = 20/434 (5%)
Strand=Plus/Minus
Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266
|||| | ||||| || ||||| || || ||||| ||||||||| | ||||||||||| |
Sbjct 987387 ACCGCCGCGAGGGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCG 987328
Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326
|||| ||| ||||| | || ||| | || |||||||| |||| ||||||
Sbjct 987327 AATACAAAGACTGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTA 987268
Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386
| || | |||| |||||| |||| |||||||||| | | || |||||| ||
Sbjct 987267 TAAACAAGCTCAAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTG 987208
Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT---- 20442
|||| | | ||||||||| |||||||| ||| | | ||||| ||||| |||
Sbjct 987207 CAGATTTCAGTAAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTTAACT 987148
Query 20443 --------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACG-ATCCGCTGAT 20487
|||| | | | |||||| | |||| || || | || |||
Sbjct 987147 TTCCAGAATCCCCGTCTAAACCTAAGCTATCGTGTTTATTGTACCAGCGCAGTTGC-GAT 987089
Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547
|||||| |||||||||| || ||||||||| || ||| |||| || | ||||||||
Sbjct 987088 ATGGGATTGGGTGTTCCATTTAATATTGCATCATACGCGTTGCTCACAAAAATGATTGCC 987029
Query 20548 CATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTAC 20607
||| | ||| | | ||||| || | |||||| |||| ||||||||| ||||
Sbjct 987028 CATATAGTGGATATGGATTGTGGTGAATTTATTCACACCTTAGGTGACGCGCATGTTTAT 986969
Query 20608 CTTAATCATATAGA 20621
| | ||||||||
Sbjct 986968 TTGGACCATATAGA 986955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183902698900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |