Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6 152 4e-32 >seq6 Length=1507273 Score = 152 bits (168), Expect = 4e-32 Identities = 293/434 (68%), Gaps = 20/434 (5%) Strand=Plus/Minus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||| | ||||| || ||||| || || ||||| ||||||||| | ||||||||||| | Sbjct 987387 ACCGCCGCGAGGGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCG 987328 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| ||| ||||| | || ||| | || |||||||| |||| |||||| Sbjct 987327 AATACAAAGACTGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTA 987268 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 | || | |||| |||||| |||| |||||||||| | | || |||||| || Sbjct 987267 TAAACAAGCTCAAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTG 987208 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT---- 20442 |||| | | ||||||||| |||||||| ||| | | ||||| ||||| ||| Sbjct 987207 CAGATTTCAGTAAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTTAACT 987148 Query 20443 --------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACG-ATCCGCTGAT 20487 |||| | | | |||||| | |||| || || | || ||| Sbjct 987147 TTCCAGAATCCCCGTCTAAACCTAAGCTATCGTGTTTATTGTACCAGCGCAGTTGC-GAT 987089 Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547 |||||| |||||||||| || ||||||||| || ||| |||| || | |||||||| Sbjct 987088 ATGGGATTGGGTGTTCCATTTAATATTGCATCATACGCGTTGCTCACAAAAATGATTGCC 987029 Query 20548 CATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTAC 20607 ||| | ||| | | ||||| || | |||||| |||| ||||||||| |||| Sbjct 987028 CATATAGTGGATATGGATTGTGGTGAATTTATTCACACCTTAGGTGACGCGCATGTTTAT 986969 Query 20608 CTTAATCATATAGA 20621 | | |||||||| Sbjct 986968 TTGGACCATATAGA 986955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183902698900