Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 2e-44
>seq1
Length=2974285
Score = 194 bits (214), Expect = 2e-44
Identities = 498/750 (66%), Gaps = 14/750 (2%)
Strand=Plus/Minus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
|||| ||||| || ||||| || ||||||||||| ||||| || ||||| || ||
Sbjct 233336 TTAGCCATAACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTT 233277
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACAT---AAACACTTTA 14011
||| ||| || || ||||||||||| ||||| ||||| || |||| |||| ||||
Sbjct 233276 CCTGCCAACGAAATGTTTTCCATAAAGTCAAAGGGATTAGTA-ACATTGTAAAC-CTTT- 233220
Query 14012 TCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAA 14071
|| |||| | | | |||||||| || |||| ||||| | || || |||| ||
Sbjct 233219 TCGTTGCCTAATGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAAT 233160
Query 14072 TCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATA 14131
| ||| |||||||| | | | ||| | || || ||||| || ||||| |||
Sbjct 233159 TTACAGTTCATACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATA 233100
Query 14132 GACACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGT 14191
| || ||||| | ||||| || | ||| || | || | |||| | ||
Sbjct 233099 GCAACGGCCTCTGTGATAATCTTCTCGACAATAGCAGCATCGGGTC--TGTTTTGCAAGT 233042
Query 14192 TTAAAAATTAAA--CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 14249
| ||| | | || |||||||| || | |||||||| | | || | ||||
Sbjct 233041 GGGAGAATAACAAGCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGT 232982
Query 14250 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 14309
| || || || || || |||||||| |||| || || |||||||| || | || || |
Sbjct 232981 TGGAGAAAGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACG 232922
Query 14310 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATG 14369
|||| ||||| || || ||||| |||||||| || | | ||||| ||||| | |
Sbjct 232921 ATCCACTGAAGAAAATACCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAGG 232862
Query 14370 CTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429
| | | | ||||| | |||||| |||| || ||||| || || || |
Sbjct 232861 CCTCGTCATCACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAG 232802
Query 14430 TTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 14487
| ||||||||||| |||||| || ||| || | | ||||| || | || || ||
Sbjct 232801 TCTCAATAGCATTGAATAAAAAGTCTGCCTCCTTGGGGTCCTTGATAT--AGGTGTCGAT 232744
Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547
| ||| || | || ||||| || |||||||| || || ||||| ||||| ||
Sbjct 232743 CAACAAGGAGTAGGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCA 232684
Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607
| | ||||||| || ||||| | | || | || |||| || || ||||| ||
Sbjct 232683 TTTGGCTTCTGGAATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAAT 232624
Query 14608 ACCATCACTAGCTGCAAAAAATGCCAATAT 14637
|||||| ||| || ||||||||||| ||
Sbjct 232623 ACCATCGGAAGCAGCGAAAAATGCCAAAAT 232594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345479413600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |