Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1 206 3e-48
>seq1
Length=2974285
Score = 206 bits (228), Expect = 3e-48
Identities = 501/750 (67%), Gaps = 14/750 (2%)
Strand=Plus/Minus
Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410
|||| ||||| || ||||| || ||||||||||| ||||| |||||||| || ||
Sbjct 233336 TTAGCCATAACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTT 233277
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACAT---AAACACTTTA 13467
||| ||| || || ||||||||||| || || ||||| || |||| |||| ||||
Sbjct 233276 CCTGCCAACGAAATGTTTTCCATAAAGTCAAAGGGATTAGTA-ACATTGTAAAC-CTTT- 233220
Query 13468 TCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAA 13527
|| |||| | | | | |||||| || |||| |||||| | || || |||| ||
Sbjct 233219 TCGTTGCCTAATGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAAT 233160
Query 13528 TCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATA 13587
| ||| |||||||| | | | ||| | || ||| ||||| || ||||| |||
Sbjct 233159 TTACAGTTCATACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATA 233100
Query 13588 GACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGT 13647
| || ||||| | ||||| ||| | ||| || | || | |||| | ||
Sbjct 233099 GCAACGGCCTCTGTGATAATCTTCTCGACAATAGCAGCATCGGGTC--TGTTTTGCAAGT 233042
Query 13648 TTAAAAATTAAA--CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705
| ||| | | || |||||||| || | |||||||| | | || | ||||
Sbjct 233041 GGGAGAATAACAAGCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGT 232982
Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765
| || || || || || |||||||| |||| || || |||||||| || | || || |
Sbjct 232981 TGGAGAAAGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACG 232922
Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825
|||| ||||| || || ||||| |||||||| || | || ||||| ||||| | |
Sbjct 232921 ATCCACTGAAGAAAATACCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAGG 232862
Query 13826 CTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 13885
| | | | ||||| | |||||| |||| || ||||| || || || |
Sbjct 232861 CCTCGTCATCACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAG 232802
Query 13886 TTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 13943
| || || |||||||||||| || ||| || | | ||||| || | || || ||
Sbjct 232801 TCTCAATAGCATTGAATAAAAAGTCTGCCTCCTTGGGGTCCTTGATAT--AGGTGTCGAT 232744
Query 13944 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003
| ||| || | || ||||| || ||||| || || || ||||| ||||| ||
Sbjct 232743 CAACAAGGAGTAGGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCA 232684
Query 14004 TCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063
| | ||||||| || ||||| | | || | || ||||||| || ||||||||
Sbjct 232683 TTTGGCTTCTGGAATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAAT 232624
Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATAT 14093
|||||| ||| || ||||||||||| ||
Sbjct 232623 ACCATCGGAAGCAGCGAAAAATGCCAAAAT 232594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588680352800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |