Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq6 102 1e-17
seq5 100 4e-17
>seq6
Length=1507273
Score = 102 bits (112), Expect = 1e-17
Identities = 174/251 (69%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || || || ||||| ||||| | | |||| |
Sbjct 461202 AGATCT-TGAGAGATAACATTCAGGGTATAACTAAGCCTGCTATTAGAAGATTGGCCAGA 461144
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| ||||||||| | |||| ||| | || ||||| | | | ||| ||||||
Sbjct 461143 AGAGGTGGTGTCAAGCGTATTTCTGCTTTGATTTACGAAGAAGTCAGAGTTGTGTTGAAG 461084
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | ||| ||||||| ||||| | || || |||||||| || | |||
Sbjct 461083 TCATTCTTGGAGAACGTTATCAGAGATGCCGTTACTTACACTGAGCACGCAAAGAGAAAG 461024
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || || |||| | ||||| || ||||| | ||||| | | | ||||||
Sbjct 461023 ACTGTTACTTCTTTGGACGTGGTCTACGCGTTGAAGAGACAAGGTAGAACCTTGTATGGT 460964
Query 16688 TTTGGAAGTTA 16698
|||||| ||||
Sbjct 460963 TTTGGAGGTTA 460953
>seq5
Length=1501106
Score = 100 bits (110), Expect = 4e-17
Identities = 174/252 (69%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || |||||||| || ||||| | | |||| |
Sbjct 199582 AGATCT-TGAGAGATAACATTCAGGGTATCACCAAACCTGCTATTAGAAGATTGGCCAGA 199524
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| ||||||||| |||||| ||| | || ||||| | | | ||| ||||||
Sbjct 199523 AGAGGTGGTGTCAAGCGTATCTCTGCTTTGATTTACGAAGAAGTCAGAGTTGTCTTGAAG 199464
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | | | ||| || |||||| | || |||||||||||||| | |||
Sbjct 199463 TCGTTCTTGGAAAACGTCATTAGAGATGCTGTTACTTACACCGAGCACGCTAAGAGAAAG 199404
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || || |||| | ||||| || ||||| | || ||| | | | || |||
Sbjct 199403 ACTGTTACTTCTTTGGACGTTGTCTACGCGTTGAAGAGACAGGGCAGAACCTTGTACGGT 199344
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 199343 TTCGGCGGTTAA 199332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075181713860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |