Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 3e-21
>seq1
Length=2974285
Score = 118 bits (130), Expect = 3e-21
Identities = 310/467 (66%), Gaps = 11/467 (2%)
Strand=Plus/Plus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
||||||||| |||||||||||| |||||||| |||||||| |||| | ||| |
Sbjct 232873 GAACGTCTTGTTGCATTTGCTGCTGTTGAAGGTATTTTCTTCAGTGGATCGTTTGCATCC 232932
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
||||||||| | || || | | | ||||| ||| | || || || || ||||||||
Sbjct 232933 ATCTTTTGGTTGAAGAAGAGAGGCTTGATGCCTGGTTTGACTTTCTCCAACGAGTTAATC 232992
Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668
|||| ||||||||| | || ||||||||||| || || ||| || || | | |
Sbjct 232993 TGCCGTGATGAGGGTTTGCACACCGATTTTGCTTGCTTGTTAT-TC----TCCCA-CTTG 233046
Query 22669 CATAAACTTCCATATGAAACTGTACTTG---ATATTATTACAAATGCAGTTGAACTTGAA 22725
|| || || ||| || | | | | ||||| ||| | || |||| |||||
Sbjct 233047 CAAAACAGACCCGATGCTGCTATTGTCGAGAAGATTATCACAGAGGCCGTTGCTATTGAA 233106
Query 22726 CGTCTATTTATTTGCGAGGCGTTACC-AGTAAGTCTCATTGGTATCAATGCCGAATCAAT 22784
||| | || || || || | | || | | ||||| || ||| ||
Sbjct 233107 AAGGAGTTTTTCACTGATGCTTTGCCTATTTCGT-TGTTGGGTATGAACTGTAAATTGAT 233165
Query 22785 GAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCA 22844
| | || | | |||||||| || | || | | || | || | | ||||
Sbjct 233166 GTGCCAGTACGTGGAGTTTGTTGCCGACAGATTACTTGTCGCATTAGGCAACGAAAAGGT 233225
Query 22845 TTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904
||| || || |||||| ||||| | |||||| ||||| | | ||||||||||||
Sbjct 233226 TTACAATGTTACTAATCCCTTTGACTTTATGGAAAACATTTCGTTGGCAGGAAAGACCAA 233285
Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951
|| |||||||| |||||| |||| |||||||| || ||||||||||
Sbjct 233286 CTTTTTCGAAAAGAGAGTTAGTGACTACCAAAAGGCTGGTGTTATGG 233332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353266015640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |