Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 242 4e-59
>seq1
Length=2974285
Score = 242 bits (268), Expect = 4e-59
Identities = 903/1404 (64%), Gaps = 35/1404 (2%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
|||||||||| ||||| || ||||||||||| ||||||||||| ||||||| |||||
Sbjct 200512 TAGATATTGGAAGTGTAGGGTTCAAAGCACTCGTTGTTACCCAATATTTGGGAAGTGGAT 200453
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTC 114060
|| ||||||||||| || | | | || | | ||| | || | ||| ||
Sbjct 200452 GCCGTGGGCATGGGAGCAACCAATAACGAATTTCTAATACCATGCTTAGCCAATTT-TTG 200394
Query 114061 CTTGAGGGCGTCCCAGTCGTAGT------TGAGCTTTGTCTCCCCCTGCCACATATCAAA 114114
||| | | ||||||||| | || ||||| | |||| | | ||||||
Sbjct 200393 CTTTAATGTGTCCCAGTCCCACAACTCACTGGGCTTTCTGTCCC------AAAGATCAAA 200340
Query 114115 CTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC 114174
||| | | ||| | ||||||||| || ||||| | | ||||| | ||||| ||||
Sbjct 200339 CTGTAACAAACCCTTGGAGGCTGGAGACCCCTCGTAACTTTCGTAAGAACCCTCGACCTG 200280
Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234
|||||||||| || || || | || |||| ||||| || || ||||| || |||
Sbjct 200279 CGCCAATTCGATACTGGCTTCCACTGCACCGTGGTACATGGTTTCGAAAATCTGAATATT 200220
Query 114235 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 114294
|| | | | || | | || ||||| | | || | ||||| |||| || |
Sbjct 200219 CAATTCTCTAGCTTGTTGCGAGTCAAAGGGCAATCTCAATGCCATAAAAGCATCTGCCAA 200160
Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCA 114353
||| || ||||| | ||||||| | || ||||| ||||| |||| | || ||| |
Sbjct 200159 ACCCTGCACACCCAATGCAATTGGTCTATTCCTCATGTTAGATCTTTTG-GCT-TCTGGA 200102
Query 114354 -CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412
|||| ||||| || | ||| || | || || | || ||| |||||||| || | |
Sbjct 200101 ACGGGGTAAAAGTTACGATCAATGATTCTGTTCAAGTTACGGGTAACAACCTTGGTAACT 200042
Query 114413 TCATGAAGCTTTTC------GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 114466
||||||||||| || ||| || || | |||| | ||| || |||
Sbjct 200041 TCATGAAGCTTCTCAAAGTTGTACCACAAGTTGTTGCTGTCTTTTTCAACAAACGAGGGA 199982
Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526
|| ||||| || |||| ||||| |||| |||||| | ||| || | ||||
Sbjct 199981 AGTGCGATAGATGCCAAGTTACATACAGCAACCTCATCTGGCGAGGAGTATTCGACAATT 199922
Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586
|| ||||||||| ||| || ||| ||||||||||||||||| | ||| | ||
Sbjct 199921 TCACAACACAAATTGGAAGATTTGATGACACCCAAGTTCTTTTGATTAGTTTTTTTATTG 199862
Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646
|| ||||| ||||| | |||| |||| || || || || ||||| | || | ||| ||
Sbjct 199861 CATGCATCTTTGTACAACATGAATGGGGTACCGGTTTCGGTTTGCGCCTCCAAAATGGCG 199802
Query 114647 TTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 114705
| ||| | || | | || | | ||| | | || || ||||||||
Sbjct 199801 TACCATAATTTCTGAGCCTTG-ATAGTCTTTCTTCCACGGTTTTCACGTTCGTACTTCTC 199743
Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765
||| | || |||||||| ||||| | || || | ||| | |||| || || |
Sbjct 199742 GTACAATGCCTCAAACTCATCACCGTAAACATCGGACAAACCTTGGGCCTCATTAGGAGA 199683
Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825
||| | | ||| | | || || |||||| | |||||| || | ||| || ||||| |
Sbjct 199682 GAACAAGGTCCACTCAGCATTCTGCTCAACTCTCTTCATAAACAAGTCAGGAATCCACAA 199623
Query 114826 AGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 114885
|||| ||| | ||| | | |||||| | || ||||| | | || |
Sbjct 199622 TGCTGGGAACAAATCTCTTGCCCTCATTTCTTCCTTACCATGATTCTTTCTAATATCGAT 199563
Query 114886 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTT 114939
|| || | ||||||||||||||| ||||||| || | || | || || | |||
Sbjct 199562 GAAATCAAAGATATCCGCGTGCCATGGTTCCAAATATAAGGCAAATGCACCGGGTCTCTT 199503
Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999
| |||| |||| | || || | || ||| ||| || || | || ||| |||||
Sbjct 199502 ---ATTACCACCCTGATCCACGTAACGAGCAGTGTTATTGAAAACTCTAACCATAGGAAT 199446
Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059
|||||||| ||| || || || || ||| | | | | | | | ||
Sbjct 199445 GATACCATTAGAGGTACCGTTGGTACCAGCAATGTAGGCACCAGTCGAGCGAATGTTGTG 199386
Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119
||||| | ||||||||| || || | ||| || || || || | | | | |
Sbjct 199385 TATGTGTAAACCAATACCTCCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTATC 199326
Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179
|| || ||||| || || ||| | || | || || | ||||| |||||||| ||
Sbjct 199325 ATAAATACCGTCAATAGAATCATCTTTCATAGCAATCAAAAAGCACGAGGACATTTGAGG 199266
Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239
| ||||||||||| || || | || || | ||||| | || | ||||||||
Sbjct 199265 GTTGGGTGTACCAGCATTAAACAAAGTAGGCGAGCCGTGGGTAAAGTGTCTCTGGGACAT 199206
Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299
| ||| ||| || || | ||| ||||||||| || || |||||||| || | || |
Sbjct 199205 CATATTGTAAGTTTCAATGACTCTGGGAATGTCGTCACCATGAATACCAATGGCAACTCT 199146
Query 115300 CATAAACATGTATTGGGGTGTTTC 115323
||||| | || || ||| ||||
Sbjct 199145 CATAATTAAGTGCTGAGGTCTTTC 199122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353450661600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |