Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq6 385 6e-102
seq1 255 7e-63
seq4 174 2e-38
seq3 102 1e-16
>seq6
Length=1507273
Score = 385 bits (426), Expect = 6e-102
Identities = 1059/1614 (66%), Gaps = 33/1614 (2%)
Strand=Plus/Plus
Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624
||| |||||||| || || |||| || || || ||||||||| |||||||| || ||
Sbjct 468717 CTTCTCATCTTCCTCCTTGAACTTCTCAGCTTCAGAGACCATCTTCTCAATGTCCTCCTT 468776
Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684
|| ||||| ||||| || || || || |||||||||| | ||||| | |||| ||
Sbjct 468777 GGACAATCTACCCTTGTCGTTGGTGATGGTAATCTTTTGAGTCTTACCAGTACCCTTCTC 468836
Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744
|||| || || | ||||||||| ||||||| || || | || | ||| || ||
Sbjct 468837 CAAAGCAGAGACGTTAAGAATACCATTGGCATCAATGTCAAAAGTAACCTCAATCTGGGG 468896
Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
||| | || || | ||||| || | || || || ||||||| || |||| ||
Sbjct 468897 AACACCACGAGGAGCAGGAGGAATGCCAGACAACTCGAACTTACCAAGCAAGTTGTTGTC 468956
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864
| | | ||| ||| ||||| ||| | || | || || |||| || || ||
Sbjct 468957 CTTGGTCTTGGCACGCTCACCCTCAAATACCTGGATAAGAACACCAGGCTGGTTGTCAGC 469016
Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924
|| ||||| | | ||||| | || || || | ||||| || || | |
Sbjct 469017 GTAAGTAGAGAAAGTCTCAGACTTCTTGGTAGGGATAGTAGAGTTTCTGGGGATCAACTT 469076
Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984
|||||| |||||||| ||| || | || | || || || | || ||||| | ||
Sbjct 469077 GGTCATGATACCACCAGCAGTCTCAATACCCAAGGAAAGGGGGGCAACATCCAACAACAA 469136
Query 6985 CAG-------GTCTTG--AACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035
|| |||||| | ||| || |||| | | ||||| || |||||
Sbjct 469137 CAAATCCTGAGTCTTGGTAGAAGAAGTGT------CACCGGAAAGAATGGCAGCCTGGAC 469190
Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095
| || ||||| || || || ||||||||||| || | | | || | || ||||||||
Sbjct 469191 AGCGGCACCGTAAGCAACAGCTTCATCGGGGTTGATGGATCTGTTAGGCTCCTTACCGTT 469250
Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155
|| | || || | || | ||||| || ||||||| || || ||||| || | ||
Sbjct 469251 GAAGAAGTCAGAGACCAACTTTTGAACCTTGGGGATTCTGGTAGAACCACCAACAAGGAC 469310
Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTC 7215
|| || | || || || || | ||| | ||| || | || ||||| || ||
Sbjct 469311 AATCTCGTGGACAGCGGACTTGTCAACCTTGGCGTCACGCAAGACCTTCTCGACGGGGTC 469370
Query 7216 CATA--CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGAT 7273
|| || | | || | ||| ||||| ||||| || | || | ||| || ||
Sbjct 469371 CAAGGTCAGT--CTAAAGAGATCCTGACACAACTCCTCGAATCTGGCTCTGGTGATAGAG 469428
Query 7274 GTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA 7333
|| ||||| |||| || ||||| | || || || ||||| | ||||| || | |||
Sbjct 469429 GTGTAGAAGTCAATACCCTCGTAAAGAGAGTCGATCTCAATAGAGGTTTGAGCAGAAGAA 469488
Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTA 7393
|| || |||| ||| || |||||||| || |||| || | | | || | | ||||
Sbjct 469489 GACAAAGTTCTCTTGGCACGCTCACAAGCAGTTCTCAATCTTCTCAAAGCTCTCTGGTTG 469548
Query 7394 CCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTC 7453
||| | ||| ||||| | || | || ||||| | | ||||| || || |
Sbjct 469549 GTGGACAAATCCTTCTTGTTCTTTCTCTTGAACTCGTTAACAAAGTGGTTAACAAGACGG 469608
Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513
|||||||| |||||||||||||| || || || || || | ||||| || || |||
Sbjct 469609 TGGTCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAAATA 469668
Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|| | ||||| | ||| || ||||| || ||||||||||||| ||| ||||| |
Sbjct 469669 CCATCCTCAATAGAAAGCAAAGAGACATCGAAAGTACCACCACCCAAGTCGAAAATCAAG 469728
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|||||| | || | || | ||||| || | |||||| || || || || || || ||
Sbjct 469729 ACGTTCTTCTCTTGCTCATCCTTCTTGTCCAAACCGTAAGCAATGGCGGCGGCAGTGGGC 469788
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| |||||||| | | | ||||| ||||||||| | ||||| || || ||||||
Sbjct 469789 TCGTTAATAATTCTCATAACGTTCAAGCCAGCAATCAAACCAGCATCCTTGGTGGCTTGT 469848
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| ||| || ||||||||||| || ||||| || ||||| || || | || || ||
Sbjct 469849 CTTTGAGAGTCGTTAAAGTAAGCAGGGACGGTGACGACGGCATCGTTAACCTTGCAGCCA 469908
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813
|| | || ||| | || ||||| || | | ||| || || || ||||| |
Sbjct 469909 AGGAATCCCTCAGCGGTCTCCTTCATCTTACCCAAGATCATGGAAGAGATTTCTTCGGGA 469968
Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873
| || || || ||||| || | ||||| | || |||| ||| || | |
Sbjct 469969 GTGAAAACCTTGGTCTCACCCTTGTACTCAACCTGGATGTTGGGCTTA---CCACCCTTG 470025
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTC---TTGGACCTGTTGGTCCGAAAAC 7930
|| |||||| | | | | | || |||| ||||||| | || ||
Sbjct 470026 TCGACAACCTTGAAGGGGAA---GTGCTTAGCGTCAGACTGGACCTCCTCATCACTGAAT 470082
Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990
||||| || || | |||||| || ||||| || ||||| ||||||||||| | |||
Sbjct 470083 TTTCTACCAATCAAACGCTTGGCGTCAAAGACAGTGTTAGCAGGGTTCATGGCGGCCTGG 470142
Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050
||||| || ||||| || || | | || | | | || || || | ||| |||| ||
Sbjct 470143 TTCTTGGCGGCGTCACCAATCAATC--TC-TCAGTGTCTGTGAAACCAACGAACGAGGGA 470199
Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC-C 8109
|| |||| || || |||||||| |||||||| || || | |||| || || | || |
Sbjct 470200 GTAGTTCTGTTACCCTGGTCGTTGGCAATAATCTCAACTCTGTCG-TTGGCAAAGTGCGC 470258
Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATA 8163
|| || || || ||||| ||||||||||| |||| |||| || |||| ||||
Sbjct 470259 AACACAAGAGTAAGTTGTACCTAAATCAATTCCGACAGCTTTAGACATTGTATA 470312
Score = 208 bits (230), Expect = 1e-48
Identities = 755/1156 (65%), Gaps = 38/1156 (3%)
Strand=Plus/Minus
Query 7009 TTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTT 7068
|| ||| || ||||| || | || || | || ||||| || || ||||||||||||||
Sbjct 1360319 TTGACCGGTCAAGATAGCACCCTGAACGGCGGCACCGTAAGCAACAGCCTCATCGGGGTT 1360260
Query 7069 AATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGG 7128
|| | || | || || ||||||| ||| | || || |||| | || | || ||
Sbjct 1360259 GATGGACTTCTCCAATTGCTTACCGTCAAAGAAGTCGGACAACAACTTCTGGACCTTGGG 1360200
Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188
||||| || || ||||| ||||| |||| || | || | || ||| | | ||| |
Sbjct 1360199 GATTCTGGTGGAACCACCAACCAAGACGACCTCGTCAACCTGGGACTTACCAACCTTGGC 1360140
Query 7189 GTC-TCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACA 7244
|| | ||| || | | ||||| |||| || | || |||||| | | | |
Sbjct 1360139 ATCCTTCAAGACTTGCT-CAACAGGGTCCAAGGTAGACTT---GAACAAAGC-AGAGTTA 1360085
Query 7245 GT-TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
| ||||| || | || | ||| ||| | | |||| || | |||||| | || ||
Sbjct 1360084 ATGTCCTCGAATCTGGCTCTGGTGATGTTGGCAGAGAAGTCCTCACCGTCGAACAAAGAG 1360025
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
|| || |||| || || || | ||||| || | || ||| || |||||||| ||
Sbjct 1360024 TCGATCTCAACAGTGGTCTGGGTACCAGAAGACAAAGATCTCTTAGCACGCTCACAAGCG 1359965
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
|||| || | | | ||| | | | ||||||||| || | || | | | |
Sbjct 1359964 GTTCTCAATCTTCTCAAGGCTCTGGCATCACCGGAAATGTCGGCACCA-GTCTTCTTCTG 1359906
Query 7424 -AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
||||| | |||||| || || ||| | | |||||||| | |||||||||||| |
Sbjct 1359905 GAACTCCTTCTTGAAGTGCTCCAACAAGT-TGGTGTCGAAATCCTGACCACCCAAGTGAG 1359847
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || || || || ||||| || | ||| || ||||| ||||| |||||||
Sbjct 1359846 TGTCACCAGCAGTGGCCTTGACAGTGAAAACACCACCAGTGATGTTCAACAAGGAAACAT 1359787
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTAT 7601
| || ||||||||||||| ||| ||||| | |||| || || | ||| | ||||
Sbjct 1359786 CGAAAGTACCACCACCCAAGTCGAAAATCAAAACGT--GTCTCTCCTTCTCGGA-CTTAC 1359730
Query 7602 CG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655
| | |||||| || ||||| || || || || || ||||| ||||| | | ||
Sbjct 1359729 CAGCACCCAAACCGTAGGCAATAGCAGCGGCAGTAGGCTCGTTAATGATACGCAAAACGT 1359670
Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715
||| ||||| || | | ||||| || || ||||||| || | |||||||||||| |
Sbjct 1359669 TCAATCCAGCGATGGCACCAGCATCCTTGGTGGCTTGTCTCTGGGCATCGTTAAAGTATG 1359610
Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775
| || || || || || || | | || |||||||| | | | || || || || |
Sbjct 1359609 CAGGAACGGTAACAACGGCCTTCTCAACCTTCTTACCAATCTTAGCCTCGGCAATCTCCT 1359550
Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGT 7835
|||| ||||| | |||||| || || ||||| | || | || || || || |
Sbjct 1359549 TCATCTTGGTCAAAACCATAGAAGAGATCTCCTGAGGAGAGAAAGACTTGGTCTCCTCCA 1359490
Query 7836 TAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAAT 7895
| ||||| |||||| ||| ||| ||| | | || |||||| | | |||
Sbjct 1359489 AGTACTCAACCTCAATCTGGGGGTTA-CCGTTG--GCATTGACAACCTTGAAAGGCCACG 1359433
Query 7896 CTTTCATATC-GTCTTGGACCTGTTGGTC--CGAAAACTTTCTTCCGATAAGACGCTTTG 7952
|| || || ||| ||||| | || ||||| | | || || | |||||| |
Sbjct 1359432 ACTTGATGTCAGTC-TGGACGGACTCATCATCGAAACC--ACGACCAATCAAACGCTTGG 1359376
Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012
|||| ||||| ||||| |||||||||| || | |||||||| || || || || || |
Sbjct 1359375 CATCGAAAACGGTGTTCTTGGGGTTCAAAGCGGCCTGGTTCTTAGCAGCATCACCAATCA 1359316
Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072
| || | | || || || || |||||||||| || || ||||| ||||
Sbjct 1359315 ATC--TC-TCCTCGGGAGTGAAGGCAACAAACGATGGGGTAACTCTGTTACCTTGCTCGT 1359259
Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTA 8132
| || || || || | | | | | | || || | || || || || || || ||||
Sbjct 1359258 TAGCGATGATCTCAA--CTGCAGAGTCGAAAGTCG-CAACACAAGAGTAGGTAGTACCTA 1359202
Query 8133 AATCAATACCGATTGC 8148
|||| |||||||| ||
Sbjct 1359201 AATCGATACCGATAGC 1359186
>seq1
Length=2974285
Score = 255 bits (282), Expect = 7e-63
Identities = 859/1320 (65%), Gaps = 38/1320 (3%)
Strand=Plus/Minus
Query 104680 AATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGTTCGAAACACTCG 104739
|||||||| || | | || ||| | |||||||||| || || ||||| || ||||||
Sbjct 200539 AATTCACCAGCCAATACTCTTCTGGAGTAGATATTGGAAGTGTAGGGTTCAAAGCACTCG 200480
Query 104740 TTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGCAAG-AAGAA-GACTAT 104797
||||| || || || ||||| |||||||| || ||||| || |||| || || || | |
Sbjct 200479 TTGTTACCCAATATTTGGGAAGTGGATGCCGTGGGCATGGGAGCAACCAATAACGAAT-T 200421
Query 104798 TCATAGTTCCTTTCTTAACAAGTTTACGCATG---GCATTCCAATCGTATCGACCACTAA 104854
|| || | || | |||| | | ||| || | | | ||| || | || ||| |
Sbjct 200420 TC-TAATACCATGCTTAGCCAATTTTTGCTTTAATGTGTCCCAGTC----CCACAACTCA 200366
Query 104855 ACTTTGGGTCTCGATCCCACATATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCT 104914
| || | || ||||| | ||| || || | | ||| || || |||||||
Sbjct 200365 C--TGGGCTTTCTGTCCCAAAGATCAAACTGTAACAAACCCTTGGAGGCTGGAGACCCCT 200308
Query 104915 TAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTC-ACACGACGATTCGAGTGATGCG 104973
| |||| |||| ||| | | | || | ||| | || | ||| | || ||
Sbjct 200307 CGTAACTTTCGTAAGAACCCTCGACCTGCGCCAATTCGATACTG-GCTTCCACTGCACCG 200249
Query 104974 TGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTC 105033
||||| || |||||||| || | ||| || | || ||| | || || || | || | |
Sbjct 200248 TGGTACATGGTTTCGAAAATCTGAATATTCAATTCTCTAGCTTGTTGCGAGTCAAAGGGC 200189
Query 105034 ATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGA 105093
| ||| || ||||| | || || | |||||| ||||| | | || ||||| |
Sbjct 200188 AATCTCAATGCCATAAAAGCATCTGCCAAACCCTGCACACCCAATGCAATTGGTCTATTC 200129
Query 105094 CGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTT 105153
| ||| || || | ||| | | | ||||||||||| |||||| | ||||
Sbjct 200128 CTCATGTTAGATCTTTTGGCTTCTGGAACGGGGTAAAAGTTACGATCAATGATTCTGTTC 200069
Query 105154 AAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCATGGTTAAAC------TCG 105207
|||||||| ||||| | || ||||| ||| | || ||| ||| || | |
Sbjct 200068 AAGTTACGGGTAACAACCTTGGTAACTTCATGAAGCTTCTCAAAGTTGTACCACAAGTTG 200009
Query 105208 TTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGTT 105267
|| | || ||||| | || | ||||| ||||| | |||||||| ||
Sbjct 200008 TTGCTGTCTTTTTCAACAAACGAGGGAAGTGCGATAGATGCCAAGTTACATACAGCAACC 199949
Query 105268 TCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCA 105327
|| || | | || | |||||| ||||||||| || ||||| || |||
Sbjct 199948 TCATCTGGCGAGGAGTATTCGACAATTTCACAACACAAATTGGAAGATTTGATGACACCC 199889
Query 105328 ACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCC 105387
| || || || || | |||| ||| || || |||||||| | ||| ||||||| ||
Sbjct 199888 AAGTTCTTTTGATTAGTTTTTTTATTGCATGCATCTTTGTACAACATGAATGGGGTACCG 199829
Query 105388 GTTTCACTTTGGGATTTAATAATTGCTTTCCA-AATCTCCGAAGCTGGTACAACTTTAGT 105446
||||| |||| | | | ||| || | ||| ||| || || || | |||| |
Sbjct 199828 GTTTCGGTTTGCGCCTCCAAAATGGCGTACCATAATTTCTGAGCCTTGATAGTCTTTC-T 199770
Query 105447 TGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTC 105506
| | |||| |||||| |||||||| | | |||||||| | |||||| || ||
Sbjct 199769 TCCACGGTTTTCACGTTCGTACTTCTCGTACAATGCCTCAAACTCATCACCGTAAACATC 199710
Query 105507 TGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCG 105566
|| | ||| | |||| || |||| | ||||| | ||| | | ||| ||||| |
Sbjct 199709 GGACAAACCTTGGGCCTCATTAGGAGAGAACAAGGTCCACTCAGCATTCTGCTCAACTCT 199650
Query 105567 TTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTC 105626
||||| ||||| || |||||||||| |||| || | |||| |||| |||||
Sbjct 199649 CTTCATAAACAAGTCAGGAATCCACAATGCTGGGAACAAATCTCTTGCCCTCATTTCTTC 199590
Query 105627 ATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAA 105686
| ||| |||||| | ||| |||| ||||| | ||||| |||||||||||||| ||
Sbjct 199589 CTTACCATGATTCTTTCTAATATCGATGAAATCAAAGATATCCGCGTGCCATGGTTCCAA 199530
Query 105687 ATAGACTGC-AATAGACC----CT-TTACGACGCCCCGCTTGATTGACATATCTTGCGGT 105740
||| | || ||| ||| || ||| || ||| |||| || || | || ||
Sbjct 199529 ATATAAGGCAAATGCACCGGGTCTCTTATTACCACCC---TGATCCACGTAACGAGCAGT 199473
Query 105741 TGAGTTAT---ACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACG 105797
||||| | |||| | ||| ||||| ||||||| || || || || || |||
Sbjct 199472 ---GTTATTGAAAACTCTAACCATAGGAATGATACCATTAGAGGTACCGTTGGTACCAGC 199416
Query 105798 AATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT 105857
||| | | | | | || | | ||| | |||||| |||||||| ||||| | |||
Sbjct 199415 AATGTAGGCACCAGTCGAGCGAATGTTGTGTATGTGTAAACCAATACCTCCAGCACTCTT 199356
Query 105858 ACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATT 105917
|| ||||| || | ||||| ||||||||||| ||| ||| || || |
Sbjct 199355 GGAAATCAAGGCACATGTCTTCAAGGTATCATAAATACCGTCAATAGAATCATCTTTCAT 199296
Query 105918 CGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977
||||||| || ||||| |||||||| || |||||||||||||||| |||| ||| ||
Sbjct 199295 AGCAATCAAAAAGCACGAGGACATTTGAGGGTTGGGTGTACCAGCATTAAACAAAGTAGG 199236
Score = 113 bits (124), Expect = 6e-20
Identities = 276/411 (67%), Gaps = 18/411 (4%)
Strand=Plus/Minus
Query 11280 ATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGT---TGC 11336
||||||||| || || | ||| || || | || | || || ||| || || |||
Sbjct 422478 ATCAAATCTTCCAGGTCTTAACAAAGCTTTATCTAATACGTCAGGACGATTAGTACCTGC 422419
Query 11337 ACCTATAACAACAATTTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTT 11396
|| ||||||| |||| ||| || || ||||||||||| ||| || || ||
Sbjct 422418 TAATACAACAACATGATCAGA---ATTGTCAAAGCCATCCATTTCAACTAACAACTGATT 422362
Query 11397 AATTGTTTGTTCACGCTCATCGTTTGCCGCAAACCCATT----CA-TACTTCTTTTCTTA 11451
| ||| | ||| | ||||| ||||| ||||||| || | | ||||| ||
Sbjct 422361 CAATGTGTTTTCTCTTTCATC-ATTGCC----ACCCATTTTACCATTTCCTCTTTCTTTT 422307
Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCA 11511
|| || |||||||| ||||| | |||||| || || | ||||| || || |
Sbjct 422306 CCTATAGCATCAATCTCATCAACAAAGATGATGGCAGGAGCCATATCACGAGCAGTTTTA 422247
Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCC 11571
|| | ||| || |||| ||| || || || |||||||| || || || ||| |||
Sbjct 422246 AACAAATCGCGTACTCGAGATGCTCCAACACCAACAAACATCTCCACAAATTCTGATCCC 422187
Query 11572 GAACACTGA-ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTT 11630
||| ||||| | ||| |||||| || |||||| || | || |||||||| || ||
Sbjct 422186 GAA-ACTGACAAAAATGGAACGCCAGCTTCACCTGCAGTTGCTTTCGCTAAAAGAGTCTT 422128
Query 11631 ACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681
|||||||| || ||| | ||| | ||||| ||||| || || |||||
Sbjct 422127 TCCTGTACCAGGAGGACCCGATAAAATAGCACCTCTTGGAATCTTGGCACC 422077
Score = 96.9 bits (106), Expect = 4e-15
Identities = 223/335 (67%), Gaps = 6/335 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||||||||| || || || ||| | |||||| ||||| | |||
Sbjct 1015310 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCGTTGGTGGATTTGACCTCAAAAACACCG 1015369
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| | || | || | || | |||||| ||||||||||||| |||||| | || |
Sbjct 1015370 GCACCGATATCCAAGATAGAGATATCAAAGGTACCACCACCCAAGTCAAAGA-CAGCA-- 1015426
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| | || | | ||||| || | ||| || || | ||| || || || || ||
Sbjct 1015427 ---ACAACCTCACCGTCATTCTTCTCTAAACCATAGGCCAAAGCGGCGGCAGTAGGCTCG 1015483
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|||| || | | | ||||| |||| |||| | | || || || || |||||||
Sbjct 1015484 TTAACAACTCTCAAAACGTTCAAGCCAACAATCTTACCAGCGTCCTTGGTAGCTTGTCTC 1015543
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||||||||||||| ||| || || || || | |||| |||||| |
Sbjct 1015544 TGAGCATCGTTAAAGTAGGCTGGGCAGGTAACCACGGCATTGTTGACAGCCTTACCCAAG 1015603
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
| | || || | || ||||||||| | | |||
Sbjct 1015604 TTAGCCTCAGCAGTCTCCTTCATTTTGTTCAAAAC 1015638
>seq4
Length=1642203
Score = 174 bits (192), Expect = 2e-38
Identities = 463/701 (66%), Gaps = 15/701 (2%)
Strand=Plus/Minus
Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511
|| |||| ||||||||||| ||||| || || || || | || ||| |||| ||||| |
Sbjct 897412 TCAAATCAAAATCTTCACCTCCCAAATGAGTGTCACCAGAAGTGGCTCTGACCTCAAAAA 897353
Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571
||| ||||||||| | || | ||||||||||| ||||| ||||||| ||| ||| |
Sbjct 897352 CACCGCCTTCAATGCTCAAAAGAGAAACATCAAAGGTACCTCCACCCAAGTCGTAAACAA 897293
Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631
| | | | || | || | |||| || | ||||| || || || || || || |
Sbjct 897292 TGATCTGCTTTTCACCATC---GGTCTTGTCTAATCCGTAGGCAATTGCAGCTGCAGTGG 897236
Query 7632 GTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690
| ||||||| ||| | || ||| |||| |||||||| || | || || || || |||
Sbjct 897235 GCTCATTAACAATTCTCAACACA-TTCAACCCAGCAATTGTACCGGCGTCCTTGGTTGCT 897177
Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750
|||| ||| | ||| || || || || || || || || || |||| || || |||||
Sbjct 897176 TGTCTTTGAGCATCATTGAAATACGCAGGAACAGTGACCACGGCGTGAGTAACATTCTTG 897117
Query 7751 CCGAGATACGATTC--CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808
|| | || |||| || ||| ||||||| | | || ||| | ||||| || |
Sbjct 897116 CCCAAGTA--ATTCTGAGCAATACTCTTCATTTCACTCAAAATCATGGCAGAAATTTCCT 897059
Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868
| | || ||| | ||||| | | || ||| | | |||||| ||
Sbjct 897058 CCATAGTGAAAGTCTTCTTCTCACCCATGTAGGTGACCTCAGTGACGGGTTT---GCCAT 897002
Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928
| | || || || | | ||| || || || | ||| || ||| ||
Sbjct 897001 CCTTTTTCAAGACTTTGTATGGCAAATGCTTAATCTCCTTTTGTACGACAGAGTCACTAA 896942
Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988
||||| ||| || | | ||| | |||||| | ||||| | | ||||||| | | ||
Sbjct 896941 ACTTTGATCCAATTAATCTCTTAGAATCAAAGATGGTGTTCTCGTGGTTCATAGAAGCTT 896882
Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048
||||||| || || || |||| | |||||| || || ||||| || || |||||||
Sbjct 896881 GGTTCTTGGCGGCATCACCGACTAAACGTTC---CTTGTCGGTAAATGCCACATACGATG 896825
Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108
| || ||| || || || || || | ||||||||| || | | |||| | || |
Sbjct 896824 GAGTAATTCTGTTACCCTGTTCATTGGGAATAATTTCAACCCTACCATTTTTCATCACAC 896765
Query 8109 CGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149
| || || || || || || || ||||||||||| ||| ||
Sbjct 896764 CAACACATGAGTAAGTGGTACCCAAATCAATACCAATTACT 896724
Score = 109 bits (120), Expect = 7e-19
Identities = 384/593 (65%), Gaps = 19/593 (3%)
Strand=Plus/Minus
Query 6585 ACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCAT 6644
|||| || || || | ||||| ||||| || || || | |||||| ||||| ||||
Sbjct 898273 ACTTCTCAGCTTCCTCAACCATACGGTCAATTTCATCCTTGGTTAATCTACCCTTGTCAT 898214
Query 6645 TCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT--ACATTCAA 6702
| || || ||||| || || ||||| | ||||||| || ||| || || |
Sbjct 898213 TTGTGATGGTAATAGACTCTGACTTACCAGTACCCTTATC--CATGGCTTCAACCTTAAG 898156
Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762
||||||||| ||||| | || | || | |||||| || ||| | || || |
Sbjct 898155 AATACCATTGGCATCTAAGGAAAAGGTAACCTCAATTTGAGGAACACCACGAGGAGCAGG 898096
Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822
||||| || || || ||||| |||| | | |||| ||| | || ||||||
Sbjct 898095 AGGAATGCCAGTCAACTCAAACTTACCCAATCTGTTGTTGTCCTTGACCAATGCACGTTC 898036
Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882
||||||||| |||| ||| || | || || ||||| || || ||||| || ||
Sbjct 898035 ACCTTCATAAACTTGAATCAATACTGTGGGCTGGTTATCAGCAGCAGTAGAGAAAATCTG 897976
Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942
|||||| | ||||| | || ||||| ||| | | ||||| | |||||| |
Sbjct 897975 GGATTTCTTGGTAGGAATAGCAGTGTTTCTGTTAATCAAGGTAGTCATGACACCACCAGT 897916
Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002
||||| | ||||| | || || | || ||||| | || | |||| ||||
Sbjct 897915 GGTTTCAATACCAAGGGTCAAGGGGTTGACATCCAATAATACAATATCTTCAACA----- 897861
Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062
| ||||||| | || | | ||||| || | || || || || || ||||||||
Sbjct 897860 -CCCGCTTCACCAGCCAAAACACCAGCTTGAACAGCAGCACCATAAGCCACTGCCTCATC 897802
Query 7063 GGGGTTAAT--CGTTTTATTCAGTTCTTTAC--CGTTAAAATAATCCGATAACATTTGTT 7118
||||| || | || | | |||||| | || ||| | ||| ||||| | ||
Sbjct 897801 AGGGTTGATACCCTTGGAAGC-CTTCTTTCCGTCGAAAAACTTCTCCAATAAC---TCTT 897746
Query 7119 GAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171
||| || ||||||| || || ||||| || | || || ||| ||| ||||
Sbjct 897745 GAACCTTGGGGATTCTGGTGGAACCACCCACAAGTACAATGTCA-TCAATTTC 897694
>seq3
Length=1643810
Score = 102 bits (112), Expect = 1e-16
Identities = 217/321 (68%), Gaps = 5/321 (2%)
Strand=Plus/Plus
Query 11365 TCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCC 11424
|||||||||||||| || |||||| || || | || |||||| ||||| || ||
Sbjct 702074 TCGAAACCATCCATCTCAACTAATAACTGATTCAAGGTAGTTTCACGTTCATCATTAGCA 702133
Query 11425 GCAAACCCATT---CATACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATA 11481
|| | || | || | || ||||||||| |||||||| ||||| | ||| | |
Sbjct 702134 CCACTTGCGTTACCCTTAGAACGTTGCTTACCAATAGCATCAATCTCATCCACAAACACA 702193
Query 11482 ATACACGGTTGATTTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACG 11541
|| | || ||| || || || | ||||| || || ||||| || || ||
Sbjct 702194 ATGGAGGGGGCATTCTCGCGAGCTGTCTTAAATAAGTCGCGCACTCTGGAAGCACCCACC 702253
Query 11542 CCTACAAACATTTCAACGAACGATGACCCCGAACACTGAATA-AAAGGAACGGAAGATTC 11600
|| |||||||||||||| ||| || || | | |||||||| || ||||| | |||
Sbjct 702254 CCAACAAACATTTCAACAAACTCAGAACCAG-ATACTGAATAGAATGGAACACCGGCTTC 702312
Query 11601 ACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGC 11660
||| || | || | ||| | | ||||||||||||||| || |||| | | ||
Sbjct 702313 ACCAGCAGTTGCCCTTGCAATCAATGTTTTACCTGTACCCGGAGGTCCTGAAAGGATGGC 702372
Query 11661 ACCCCTTGGTATTTTAGCACC 11681
||| || || ||| | |||||
Sbjct 702373 ACCTCTGGGAATTCTTGCACC 702393
Score = 82.4 bits (90), Expect = 1e-10
Identities = 187/279 (67%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCA 11511
||||| ||||| | ||||| ||||| || ||| ||| |||||||| ||
Sbjct 982752 CCAATTGCATCCAACTCATCGATAAAAATGATAGCTGGTGACTTTTCACGAGCTTGGCTG 982811
Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCC 11571
|||| ||||| | | ||| || || || || ||| ||| ||| | ||| || ||
Sbjct 982812 AATAATTCACGAATACGTTTGGCACCCACACCAACATACAACTCATCAAACTCAGATCCT 982871
Query 11572 GAACACTGAATAAAAGG-AACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTT 11630
|| || || | |||| ||| || |||||| ||| | || || || || || || ||
Sbjct 982872 GA-CATAAAAAAGAAGGGAACACCAGCTTCACCAGCTGTGGCGCGAGCCAAGAGAGTCTT 982930
Query 11631 ACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACCGGTACCAAA 11690
||||||||| || ||| ||||| || ||||| | || | ||| |||| ||||
Sbjct 982931 ACCTGTACCAGGAGGACCCGTTAACAACACACCCTTGGGCAACTTACCACCCAAACCAGT 982990
Query 11691 GTACTTTTCTGGCGCCTTGAGAAAATCAACAATTTCTTC 11729
|| ||| | || ||||||||||||||||||||
Sbjct 982991 AAACCGGGATGGGTCTTTAAGAAAATCAACAATTTCTTC 983029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132641216800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |