Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 221 1e-52
>seq1
Length=2974285
Score = 221 bits (244), Expect = 1e-52
Identities = 1112/1752 (63%), Gaps = 51/1752 (3%)
Strand=Plus/Plus
Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665
|||| || ||| || | | ||| | || || || ||||| ||||| || || |||
Sbjct 199122 GAAAGACCTCAGCACTTAATTATGAGAGTTGCCATTGGTATTCATGGTGACGACATTCCC 199181
Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725
|| | || || ||| | | |||||||| | || | ||||| | || ||
Sbjct 199182 AGAGTCATTGAAACTTACAATATGATGTCCCAGAGACACTTTACCCACGGCTCGCCTACT 199241
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
| || || ||||||||||| | || ||||||||| || || | ||||| | ||
Sbjct 199242 TTGTTTAATGCTGGTACACCCAACCCTCAAATGTCCTCGTGCTTTTTGATTGCTATGAAA 199301
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
|| ||||| || | || ||||| | || | | ||||||| || || ||| |
Sbjct 199302 GATGATTCTATTGACGGTATTTATGATACCTTGAAGACATGTGCCTTGATTTCCAAGAGT 199361
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGG 111904
||||| ||||| || | ||||| || | | | | | | || | ||| ||
Sbjct 199362 GCTGGAGGTATTGGTTTACACATACACAACATTCGCTCGA-CTGGTGCCTACATTGCTGG 199420
Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964
||| || ||| || ||||||| ||||| ||| || | || || || ||| || ||
Sbjct 199421 TACCAACGGTACCTCTAATGGTATCATTCCTATGGTTAGAGTTTTCAATAACACTGCTCG 199480
Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC------TATCTTGAGCC 112018
|| || | || | ||| | ||| || | ||| | ||| | || ||
Sbjct 199481 TTACGTGGATCAGGGTGGTAAT---AAGAGACCCGGTGCATTTGCCTTATATTTGGAACC 199537
Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078
|||||||||||||||| | || ||| | || | | || || ||| | || ||
Sbjct 199538 ATGGCACGCGGATATCTTTGATTTCATCGATATTAGAAAGAATCATGGTAAGGAAGAAAT 199597
Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138
| || | ||| | ||| | || | |||||||| || | || ||||||||||||||
Sbjct 199598 GAGGGCAAGAGATTTGTTCCCAGCATTGTGGATTCCTGACTTGTTTATGAAGAGAGTTGA 199657
Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT 112198
| ||| || | ||| | | || | ||| | |||| | ||| | |||||||
Sbjct 199658 GCAGAATGCTGAGTGGACCTTGTTCTCTCCTAATGAGGCCCAAGGTTTGTCCGATGTTTA 199717
Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGAC 112258
||||| |||||||| || | ||| |||||||| |||| || | | |||
Sbjct 199718 CGGTGATGAGTTTGAGGCATTGTACGAGAAGTACGAACGTGAAAACCGTGGAAGAAAGAC 199777
Query 112259 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
| ||| | | ||| | || ||| | || | |||||||| || ||||| ||
Sbjct 199778 TATCAAGGCTCAGAAATTATGGTACGCCATTTTGGAGGCGCAAACCGAAACCGGTACCCC 199837
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
|| ||| | |||||||| || || || |||| | |||||||||||| |||||||| ||
Sbjct 199838 ATTCATGTTGTACAAAGATGCATGCAATAAAAAAACTAATCAAAAGAACTTGGGTGTCAT 199897
Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438
||| |||||| | ||| ||||| | |||| | ||||||| |||||
Sbjct 199898 CAAATCTTCCAATTTGTGTTGTGAAATTGTCGAATACTCCTCGCCAGATGAGGTTGCTGT 199957
Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA-CAAAGACATTTG 112497
|||||| | ||||| ||||| || ||| || ||| || ||| | ||| || | ||
Sbjct 199958 ATGTAACTTGGCATCTATCGCACTTCCCTCGTTTGTTGAAAAAGACAGCAACAACTTGTG 200017
Query 112498 -----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552
| | ||| || || || |||||||| || ||| || ||| | |||||| |
Sbjct 200018 GTACAACTTTGAGAAGCTTCATGAAGTTACCAAGGTTGTTACCCGTAACTTGAACAGAAT 200077
Query 112553 TATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611
|||||| | || |||||||||||| ||| || | |||||| ||||| | | |
Sbjct 200078 CATTGATCGTAACTTTTACCCCGTTCCAGA-AGCCAAAAGATCTAACATGAGGAATAGAC 200136
Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGCA 112667
|||||| | ||||| || ||| | || |||| || || | ||| | || |
Sbjct 200137 CAATTGCATTGGGTGTGCAGGGTTTGGCAGATGCTTTTATGGCATTGAGATTGC----CC 200192
Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727
||||| || | |||| | ||| | ||| | || || || || ||||| ||||
Sbjct 200193 TTTGACTCGCAACAAGCTAGAGAATTGAATATTCAGATTTTCGAAACCATGTACCACGGT 200252
Query 112728 GCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 112787
|| | || || ||| || ||||| |||| || ||| | || |||| | |||||
Sbjct 200253 GCAGTGGAAGCCAGTATCGAATTGGCGCAGGTCGAGGGTTCTTACGAAAGTTACGAGGGG 200312
Query 112788 TCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCT 112843
|||||||| || |||||| || | || |||||| | ||||| | || ||| || |
Sbjct 200313 TCTCCAGCCTC-CAAGGGTTTGTTACAGTTTGATCTTTGGGACAGAAAGCCCAGTGAGTT 200371
Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903
| ||||||||| | | ||| || | || | ||| || | || |
Sbjct 200372 ---GTGGGACTGGGACACATTAAAGCAAAAATTGGCTAAGCATGGTATTAGAAATTCGTT 200428
Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963
||| | || || ||||| || || ||||| | ||||| |||||||| || || |||||
Sbjct 200429 ATTGGTTGCTCCCATGCCCACGGCATCCACTTCCCAAATATTGGGTAACAACGAGTGCTT 200488
Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023
|||||||||||| | || ||||| |||||| | || || || || |||||
Sbjct 200489 TGAACCCTACACTTCCAATATCTACTCCAGAAGAGTATTGGCTGGTGAATTCCAAATTGT 200548
Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083
|||| || | | || || || | ||| ||||| | | |||||| |
Sbjct 200549 CAACCCTTATTTGTTACGCGATCTTGTGGATTTGGGTATCTGGAACGACTCCATGAAGAA 200608
Query 113084 TCTCATGGT----GAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCCAGATGAA 113138
||| | | | | ||||| | || | | ||| | || || || |||
Sbjct 200609 CAACATCATTTCCAACAAC----GGTTCGA-TCCAGCTGTTGCCCAACATCCCTGACGAA 200663
Query 113139 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 113198
| ||| ||||||| || || ||||||||| ||| | | ||||| |||||
Sbjct 200664 GTCAAGGCGTTGTACAAGACCGTATGGGAAATCTCTCAGAAACACATTATTGATATGGCT 200723
Query 113199 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTA-TTCATGGAAAGT 113255
||||| |||| ||||||||||||| || | ||| ||| | ||| ||| |
Sbjct 200724 GCAGACCGTGCCGCCTTCATTGATCAATCCCAGTCTTTGAACATCCACATCAAGGA---T 200780
Query 113256 CCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACG 113315
|| || ||| || | | || ||||| | ||| ||||||||||||| ||||||||
Sbjct 200781 CCTACAATGGGTAAATTAACCTCGATGCATTTTTACGGTTGGAAGAAGGGACTCAAAACA 200840
Query 113316 GGGATGTATTAC 113327
|| ||||| |||
Sbjct 200841 GGTATGTACTAC 200852
Score = 109 bits (120), Expect = 7e-19
Identities = 216/320 (68%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 15969 TTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTC 16028
|| ||||| |||||||| || || | ||| || | || | ||| | |||||||||
Sbjct 422396 TTGTCAAAGCCATCCATTTCAACTAACAACTGATTCAATGTGTTTTCTCTTTCATCATTG 422337
Query 16029 GCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 16088
| ||| |||| | | || ||||| | |||||||||||||||| |||| |
Sbjct 422336 CCACCCATTTTACCATTTCCTCTTTCTTTTCCTATAGCATCAATCTCATCAACAAAGATG 422277
Query 16089 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148
||| || | || ||||| || ||| | ||| ||||| || || || |||
Sbjct 422276 ATGGCAGGAGCCATATCACGAGCAGTTTTAAACAAATCGCGTACTCGAGATGCTCCAACA 422217
Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208
|||||||||||||||||||| | || | ||| | | || || || || ||||
Sbjct 422216 CCAACAAACATCTCCACAAATTCTGATCCCGAAACTGACAAAAATGGAACGCCAGCTTCA 422157
Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268
|| ||| | ||| || | ||||||||| || ||||| || ||||| | | |||
Sbjct 422156 CCTGCAGTTGCTTTCGCTAAAAGAGTCTTTCCTGTACCAGGAGGACCCGATAAAATAGCA 422097
Query 16269 CCTCGTGGAATCTTGGCGCC 16288
|||| |||||||||||| ||
Sbjct 422096 CCTCTTGGAATCTTGGCACC 422077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742244814400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |