Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 315 8e-81
>seq1
Length=2974285
Score = 315 bits (348), Expect = 8e-81
Identities = 987/1516 (65%), Gaps = 37/1516 (2%)
Strand=Plus/Minus
Query 109726 AATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCA 109785
||||||||||| | | | || | |||||| || | ||||||||||| || |||||
Sbjct 200539 AATTCACCAGCCAATACTCTTCTGGAGTAGATATTGGAAGTGTAGGGTTCAAAGCACTCG 200480
Query 109786 TTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTT 109845
||||| || | ||||| | |||||| || |||||||||||||| | | | |||
Sbjct 200479 TTGTTACCCAATATTTGGGAAGTGGATGCCGTGGGCATGGGAGCAACCAATAACGAATTT 200420
Query 109846 CGGAGACCCTTCGTCTTTACCCGCTCACGCATT---GCGTCCCAATCATAACGACCACTA 109902
| | ||| | | || || | || || | |||||| || | || |||
Sbjct 200419 CTAATACCATGC---TTAGCCAATTTTTGCTTTAATGTGTCCCAGTC----CCACAACTC 200367
Query 109903 AATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCC 109962
| | | || | ||||| | ||| || | | ||||| | || ||||| |||
Sbjct 200366 ACTG--GGCTTTCTGTCCCAAAGATCAAACTGTAACAAACCCTTGGAGGCTGGAGACCCC 200309
Query 109963 TTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCA 110022
| | |||| ||||| || ||||| |||| ||||| ||| || || | ||| |
Sbjct 200308 TCGTAACTTTCGTAAGAACCCTCGACCTGCGCCAATTCGATACTGGCTTCCACTGCACCG 200249
Query 110023 TGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA 110082
|| ||||| || || ||||| ||| ||||| | || | || |||| |||||
Sbjct 200248 TGGTACATGGTTTCGAAAATCTGAATATTCAATTCTCTAGCTTGTTGCGAGTCAAAGGGC 200189
Query 110083 AGACCACAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATG 110141
| | | ||| | ||||| |||| || | |||||| ||||| | |||| || | ||
Sbjct 200188 A-ATCTCAATGCCATAAAAGCATCTGCCAAACCCTGCACACCCAATGCAATTGGTCTATT 200130
Query 110142 CTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCG 110198
| |||||||||| | | || |||| |||||||||||||| || || |||| |
Sbjct 200129 CCTCATGTTAGATCTTTTGGC---TTCTGGAACGGGGTAAAAGTTACGATCAATGATTCT 200073
Query 110199 ATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAAC----- 110253
|| | || || ||| ||| || | |||||| || || || | | | ||
Sbjct 200072 GTTCAAGTTACGGGTAACAACCTTGGTAACTTCATGAAGCTTCTCAAAGTTGTACCACAA 200013
Query 110254 GTTTTCG-TCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGA 110312
||| | | | || || | ||| | ||| || || ||||| || | || || ||||
Sbjct 200012 GTTGTTGCTGTCTTTTTCAACAAACGAGGGAAGTGCGATAGATGCCAAGTTACATACAGC 199953
Query 110313 AGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGAC 110372
| ||| ||| || |||||| | |||||| |||||| |||||| || |||||
Sbjct 199952 AACCTCATCTGGCGAGGAGTATTCGACAATTTCACAACACAAATTGGAAGATTTGATGAC 199893
Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432
|||||||||||| ||||| | ||| ||||||||||| || || | |||| |||||||
Sbjct 199892 ACCCAAGTTCTTTTGATTAGTTTTTTTATTGCATGCATCTTTGTACAACATGAATGGGGT 199833
Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGC 110492
||| ||||| || || | || | |||||| | ||||| | || || |||
Sbjct 199832 ACCGGTTTCGGTTTGCGCCTCCAAAATGGCGTACCATAATTTCTGAGCCTTGATAGTCTT 199773
Query 110493 GTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACAC 110552
| | | ||| |||||||| |||||| ||||||| || | ||||| ||
Sbjct 199772 TCTTCCACGGTTTTCACGTTCGTACTTCTCGTACAATGCCTCAAACTCATCACCGTAAAC 199713
Query 110553 ATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAAC 110612
||| || | ||| | |||| | ||| |||| | || ||| | || || ||||||
Sbjct 199712 ATCGGACAAACCTTGGGCCTCATTAGGAGAGAACAAGGTCCACTCAGCATTCTGCTCAAC 199653
Query 110613 CCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTC 110672
|||||||| |||| |||||||||||||| || | ||| | || | | ||
Sbjct 199652 TCTCTTCATAAACAAGTCAGGAATCCACAATGCTGGGAACAAATCTCTTGCCCTCATTTC 199593
Query 110673 TTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTC 110732
||| | ||| || || | | || | || || | |||||||| ||||||||||||
Sbjct 199592 TTCCTTACCATGATTCTTTCTAATATCGATGAAATCAAAGATATCCGCGTGCCATGGTTC 199533
Query 110733 GAGAT---AGACA---GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGC 110786
| || || || || || || |||| || || |||| | || || || ||
Sbjct 199532 CAAATATAAGGCAAATGCACCGGGTCTCTTATTACCAC---CCTGATCCACGTAACGAGC 199476
Query 110787 TGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCT 110846
||| |||||| || || | ||||||||| || |||| || ||| || |||||
Sbjct 199475 AGTGTTATTGAAAACTCTAACCATAGGAATGATACCATTAGAGGTACCGTTGGTACCAGC 199416
Query 110847 AATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTT 110906
||| || | | | ||||||| ||| || || | ||||||||| || || | |||
Sbjct 199415 AATGTAGGCACCAGTCGAGCGAATGTTGTGTATGTGTAAACCAATACCTCCAGCACTCTT 199356
Query 110907 ACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGT 110965
||| ||||| ||| | | ||| |||||||||| ||||| ||||| | ||
Sbjct 199355 GGAAATCAAGGCACATGTCT-TCAAGGTATCATAAATACCGTCAATAGAATCATCTTTCA 199297
Query 110966 TGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAG 111025
| ||||| | |||||| || ||||| ||||| || || || ||||| || | ||||
Sbjct 199296 TAGCAATCAAAAAGCACGAGGACATTTGAGGGTTGGGTGTACCAGCATTAAACAAAGTAG 199237
Query 111026 GTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTA 111085
| | | || | || | | ||||||||| | ||||| || || | | ||| |
Sbjct 199236 GCGAGCCGTGGGTAAAGTGTCTCTGGGACATCATATTGTAAGTTTCAATGACTCTGGGAA 199177
Query 111086 CATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTA 111145
|| | ||| ||||||||||||||||||| ||| | | | ||||| |||| |
Sbjct 199176 TGTCGTCACCATGAATACCAATGGCAACTCTCATAATTAAGTGCTGAGGTCTTTCTGCGA 199117
Query 111146 GCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAA 111205
|| |||| || | ||||||| |||||| || |||| |||||||||
Sbjct 199116 CTTTGCCATTAATTCTTAAAAGGTAAGATCTCTCTAAAGTTTTGAAACCAAAGTAATTGT 199057
Query 111206 AATCGAAATCACGATC 111221
| | |||||||||||
Sbjct 199056 AGTTAAAATCACGATC 199041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975852756000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |