Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=2974285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755 ||||||||||| ||||| |||||| | | |||||| | ||||| | || |||||| Sbjct 1617099 ATTAAAGTTGCTCAGTTAGTTGGTTATGTATCTGAACAAGCCCATTATCATCATGGTGAA 1617040 Query 98756 CAAAACCTTTG--TGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATA 98813 | || ||||| | ||||| || ||| || ||| ||||| | || |||| |||| Sbjct 1617039 C--AATCTTTGATTACTACAATTATTGGATTGGCCCAAAATTTTATTGGATCAAACAATA 1616982 Query 98814 TAACACTACTTGAGCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATTCGG 98873 ||| | | | ||| ||||| || ||||| ||| || |||||| ||||| | Sbjct 1616981 TAAATATCTTAAAACCAAATGGTGCTTTCGGTACTAGAGCTGCAGGAGGAAAAGACTTTT 1616922 Query 98874 CTGCATCAAGGTATATTTATAC 98895 ||||| |||| || |||| ||| Sbjct 1616921 CTGCAGCAAGATACATTTTTAC 1616900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658403035399200