Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 3e-11
>seq1
Length=2974285
Score = 84.2 bits (92), Expect = 3e-11
Identities = 141/202 (70%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755
||||||||||| ||||| |||||| | | |||||| | ||||| | || ||||||
Sbjct 1617099 ATTAAAGTTGCTCAGTTAGTTGGTTATGTATCTGAACAAGCCCATTATCATCATGGTGAA 1617040
Query 98756 CAAAACCTTTG--TGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATA 98813
| || ||||| | ||||| || ||| || ||| ||||| | || |||| ||||
Sbjct 1617039 C--AATCTTTGATTACTACAATTATTGGATTGGCCCAAAATTTTATTGGATCAAACAATA 1616982
Query 98814 TAACACTACTTGAGCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATTCGG 98873
||| | | | ||| ||||| || ||||| ||| || |||||| ||||| |
Sbjct 1616981 TAAATATCTTAAAACCAAATGGTGCTTTCGGTACTAGAGCTGCAGGAGGAAAAGACTTTT 1616922
Query 98874 CTGCATCAAGGTATATTTATAC 98895
||||| |||| || |||| |||
Sbjct 1616921 CTGCAGCAAGATACATTTTTAC 1616900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658403035399200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |