Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 178 1e-38 seq4 159 3e-33 seq5 149 5e-30 seq1 98.7 8e-15 >seq6 Length=1507273 Score = 178 bits (196), Expect = 1e-38 Identities = 459/691 (66%), Gaps = 15/691 (2%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| || | ||||| || || | || ||| | |||||||| ||||||| Sbjct 469523 AGAACTGCTTGTGAGCGTGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCTATTGAG 469464 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || | | ||||| ||||| | | || |||| | || |||| ||| || Sbjct 469463 ATCGACTCTCTTTACGAGGGTATTGACTTCTACACCTCTATCACCAGAGCCAGATTCGAG 469404 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| |||||||||||| || | || || || || | || || | || Sbjct 469403 GAGTTGTGTCAGGATCTCTTTAGACTGACCTTGGACCCCGTCGAGAAGGTCTTGCGTGAC 469344 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| |||| || ||| || || || ||||| ||||||||||| ||||| ||||| Sbjct 469343 GCCAAGGTTGACAAGTCCGCTGTCCACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATC 469284 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || ||| ||| ||| ||| | ||| || ||||| | || | Sbjct 469283 CCCAAGGTTC---AAAAGTTGGTCTCTGACTTCTTCAACGGTAAGGAGCCTAACAGATCC 469227 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 | || || ||||| |||||||| || |||||||| | || || || |||||||| || Sbjct 469226 ATCAACCCCGATGAAGCTGTTGCTTACGGTGCCGCTGTCCAGGCTGCCATTCTTTCCGGT 469167 Query 552267 CAAACTGATGA----AAAACTACAAAATATTGTACTTGTAG-ATGTTACTCCTCTATCTC 552321 | ||| | || ||| || || |||| |||| | ||||| | || || || Sbjct 469166 GACACTTCTTCTACCAAGACT-CAGGAT-TTGTTGTTGTTGGATGTTGCCCCCCTTTCCT 469109 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| | || || | ||| ||||| ||||| || | ||| ||||| ||||||| | Sbjct 469108 TGGGTATTGAGACTGCTGGTGGTATCATGACCAAGTTGATCCCCAGAAACTCTACTATCC 469049 Query 552382 CTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || || ||| | | ||| ||||| || | || || || ||| |||| || Sbjct 469048 CTACCAAGAAGTCT-GAGACTTTCTCTACTTACGCTGACAACCAGCCTGGTGTTCTTATC 468990 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 || | ||||| || || | || || || || || ||||||| || | Sbjct 468989 CAGGTATTTGAGGGTGAGCGTGCCAAGACCAAGGACAACAACTTGCTTGGTAAGTTCGAG 468930 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || || |||||||||||||||||||| || || || ||||| |||||||| || || Sbjct 468929 TTGTCTGGCATTCCTCCTGCTCCTCGTGGTGTTCCCCAGATTGAGGTTACTTTTGACATT 468870 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTT 552591 ||||||||||| ||| | || || |||||| Sbjct 468869 GATGCCAATGGTATTCTTAACGTCTCTGCTT 468839 Score = 125 bits (138), Expect = 6e-23 Identities = 360/542 (66%), Gaps = 15/542 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATGGTAA 550050 ||||| ||||| |||||||| || || || |||||||| | ||| | | | Sbjct 1359186 GCTATCGGTATCGATTTAGGTACTACCTACTCTTGTGTTGCGACTTTCG----ACTCTGC 1359241 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||| || || || || || |||||||||||| ||| ||||| | |||| | ||||| Sbjct 1359242 AGTTGAGATCATCGCTAACGAGCAAGGTAACAGAGTTACCCCATCGTTTGTTGCCTTCAC 1359301 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || | ||| | |||||||||| || || | || ||| || || || | | Sbjct 1359302 TCCCGAGGAGAGATTGA-TTGGTGATGCTGCTAAGAACCAGGCCGCTTTGAACCCCAAGA 1359360 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | || |||| ||||| || ||||| ||||| | |||| ||||| | | || ||| Sbjct 1359361 ACACCGTTTTCGATGCCAAGCGTTTGATTGGTCGTGGTTTCGATGATGAGTCCGTCCAGA 1359420 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 | || || ||| ||||||||| | |||| |||| || || || | ||||| | Sbjct 1359421 CTGACATCAAGTCGTGGCCTTTCAAGGTTGTCAATGCCAACGGTAACCCCCAGATTGAGG 1359480 Query 550290 CT-ACT-CATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTT 550346 | | | | || |||| | || ||| || || | | || || |||||||||| Sbjct 1359481 TTGAGTACTTGGAGGA---GACCAAGTCTTTCTCTCCTCAGGAGATCTCTTCTATGGTTT 1359537 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405 | | || ||||| | | ||| ||| ||||| ||||| ||| | | || || Sbjct 1359538 TGACCAAGATGAAGGAGATTGCCGAGGCTAAGATTGGT-AAGAAGGTTGAGAAGGCCGTT 1359596 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || || || ||||| ||||| || | || | ||||| || || |||||||| Sbjct 1359597 GTTACCGTTCCTGCATACTTTAACGATGCCCAGAGACAAGCCACCAAGGATGCTGGTGCC 1359656 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || |||||| | || ||| | ||||| || || || |||||||| ||||| |||| || Sbjct 1359657 ATCGCTGGATTGAACGTTTTGCGTATCATTAACGAGCCTACTGCCGCTGCTATTGCCTAC 1359716 Query 550526 GG 550527 || Sbjct 1359717 GG 1359718 Score = 123 bits (136), Expect = 2e-22 Identities = 414/632 (66%), Gaps = 27/632 (4%) Strand=Plus/Minus Query 549929 AATTAAATA-ATTTAAAGATATGAATCTTATATTTTGACATAAGATATAATGTCAAACAA 549987 |||||| || ||| | |||||| || | |||||||| ||| |||||| || Sbjct 470351 AATTAATTATATTCATAGATATACATTTCTTATTTTGATT----ATACAATGTCTAA--- 470299 Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATG 550046 |||| | || || |||||||| || || || |||||||| | || || || | Sbjct 470298 ---AGCTGTCGGAATTGATTTAGGTACAACTTACTCTTGTGTTGCGCACTTTGCCAAC-G 470243 Query 550047 GTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTT 550106 | |||||| ||||||||||| || || ||||||||||||||||| || | ||| || Sbjct 470242 ACAGAGTTGAGATTATTGCCAACGACCAGGGTAACAGAACTACTCCCTCGTTCGTTGGTT 470183 Query 550107 TCACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT 550165 |||| || ||||| | ||| | ||||||| || || || | || ||| | || ||| Sbjct 470182 TCACAGACACTGAGAGATTGA-TTGGTGACGCCGCCAAGAACCAGGCCGCCATGAACCCT 470124 Query 550166 ACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTT 550225 | || ||| | ||||| || || ||||| ||||| |||| || | |||| | || Sbjct 470123 GCTAACACTGTCTTTGACGCCAAGCGTTTGATTGGTAGAAAATTCAGTGATGAGGAGGTC 470064 Query 550226 CAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT 550285 ||| | || ||||| | || ||| | |||| | ||| || || | || Sbjct 470063 CAGTCTGACGCTAAGCACTTCCCCTTCAAGGTTGTCGACAAGGGTGGTAAGCCCAACATC 470004 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTAT 550341 | | | | |||| | | | ||| |||||| || ||| |||| || || || Sbjct 470003 CAGGTTGAGTA-CAAGGGTGAG---ACCAAGGTTTTCACTCCCGAAGAAATCTCTTCCAT 469948 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG--TCAAGAAGTTACGGAT 550399 | | || || ||||| | || || | || |||| |||| |||| ||| Sbjct 469947 GATCTTGGGTAAGATGAAGGAGACCGCTGAGGGATTCCTTGGCTGCAAG--GTTAACGAT 469890 Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || | || || || || || ||||| ||||| ||| | ||||| || || |||||| Sbjct 469889 GCCGTCGTCACCGTCCCTGCTTACTTTAACGACTCTCAAAGACAAGCCACCAAGGATGCT 469830 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || |||||||| | || ||| | | ||||| || || || ||||| || || || Sbjct 469829 GGTTTGATTGCTGGCTTGAACGTTATGAGAATTATTAACGAGCCCACTGCCGCCGCCATT 469770 Query 550520 GCATATGGACTTGATAAACATAATGATCAAGA 550551 || || || | || || | |||| ||||| Sbjct 469769 GCTTACGGTTTGGACAAGAAGGATGAGCAAGA 469738 >seq4 Length=1642203 Score = 159 bits (176), Expect = 3e-33 Identities = 370/549 (67%), Gaps = 14/549 (3%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||||| || ||||| || ||||||||||| | ||||||||| ||| Sbjct 896728 ATTGGTATTGATTTGGGTACCACTTACTCATGTGTTGGTGTGATGAAAAATGGTAGGGTT 896787 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||||||| ||||||| || |||||||||| ||||||||| ||||| | || || || Sbjct 896788 GAAATTATTCCCAATGAACAGGGTAACAGAATTACTCCATCGTATGTGGCATTTACCGAC 896847 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 | |||| |||||| |||||||| || || | ||||| || || | || || Sbjct 896848 AAGGAACGTTTAGTCGGTGATGCCGCCAAGAACCAAGCTTCTATGAACCACGAGAACACC 896907 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || |||||| |||| | ||||||||| || |||| ||| || || || || Sbjct 896908 ATCTTTGATTCTAAGAGATTAATTGGATCAAAGTTTAGTGACTCTGTCGTACAAAAGGAG 896967 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC- 550293 || ||||||| ||| | | || | | || ||| ||||| | ||| | || Sbjct 896968 ATTAAGCATTTGCCATACAAAGTCTTGAAAAAGGATGGCAAACCCGTCACTGAGGTCACC 897027 Query 550294 -TCATGAAGGATCTGTTAA-ACAATTTTCACCA--GAACAAATTTCATCTATGGTTTTAA 550349 |||| || || || | | |||||| | || ||||||| | ||| |||| | Sbjct 897028 TACATG--GG---TGAGAAGAAGACTTTCACTATGGAGGAAATTTCTGCCATGATTTTGA 897082 Query 550350 TGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAAT 550407 ||||||| | || || | || |||| |||||| ||||| | || || | Sbjct 897083 GTGAAATGAAGAGTATTGCTCA--GAATTACTTGGGCAAGAATGTTACTCACGCCGTGGT 897140 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| || || ||||| ||||| | ||| | ||||| || || || || || || Sbjct 897141 CACTGTTCCTGCGTATTTCAATGATGCTCAAAGACAAGCAACCAAGGACGCCGGTACAAT 897200 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | ||||| | | ||| | ||||| || ||||| |||||| |||| || || Sbjct 897201 TGCTGGGTTGAATGTGTTGAGAATTGTTAATGAGCCCACTGCAGCTGCAATTGCCTACGG 897260 Query 550528 ACTTGATAA 550536 | | || || Sbjct 897261 ATTAGACAA 897269 Score = 138 bits (152), Expect = 9e-27 Identities = 442/674 (66%), Gaps = 30/674 (4%) Strand=Plus/Plus Query 551922 GAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTA 551981 |||| |||||| ||||||||||| || | | ||| |||||| | |||||||| Sbjct 897508 GAAAAAGCCAAGAGAGCTCTTTCAGCTCAATCCATAGCCAGAATTGAAATTGATTCATTT 897567 Query 551982 TTTGAGGGAATTGATTATAATACGC--CTATTTCGAGGGCCAAATTTGAAGATATTTGTT 552039 | | || ||||| | | || || |||| || || || |||||||| ||| | Sbjct 897568 GTCAATGGTGTTGATCTT--TCCGAAACTCTTTCTAGAGCTAAGTTTGAAGA-ATTGAAT 897624 Query 552040 CTGATCTC-TTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGAT 552097 || | |||| || || ||||| || || ||||| ||||| | ||| | || || Sbjct 897625 ATGGAAGCATTTAAGAAGACT-TTGAAGCCTGTTGAACAGGTTTTGAAGGATGCCAACAT 897683 Query 552098 TGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAAT 552157 | || || || | |||| ||||| ||||| ||||| || || ||||| || || | Sbjct 897684 GAAGAAGTCTGAAATTGATGACATTGTACTTGTGGGTGGTTCCACCAGAATCCCCAAGGT 897743 Query 552158 TCGCGAAATGTT----AAGTTCTTATTTCAATGGTAAAAAA--TTAAATGAAAGTGTTAA 552211 || || | || ||||| |||| | || || || || | | || | || Sbjct 897744 TCAAGAGTTATTGGAGAAGTT----TTTCGACGGAAAGAAGGCTTCCAAGG--GTATCAA 897797 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 || |||||||| || || |||||||| || ||||||| | | || | |||| || | Sbjct 897798 CCCTGATGAGGCAGTGGCTTATGGTGCTGCTGTTCAAGCTGGTGTTTTGGCTGGTGAAGC 897857 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 | || | || |||||||| | | ||||| | || | | |||||| | || Sbjct 897858 GGGTG------TTGAAGATATTGTATTATTGGATGTCAACCCCTTGACCCTTGGTATTGA 897911 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 ||| ||| ||| | ||||||| | || | ||||| ||| |||||||| || || Sbjct 897912 AACCACTGGTGGTGTCATGACTACCTTGATTAACAGAAACACTGCTATTCCTACCAAGAA 897971 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 ||| | | || ||||| | | ||||| || | | || |||||| ||| ||| Sbjct 897972 ATCCCAGATTTTCTCTACTGCTGCTGATAACCAGCCCACAGTATTGATTCAAGTTTATGA 898031 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 ||| ||| | ||| || || || || | | |||| ||| | || || || Sbjct 898032 AGGTGAACGTGCATTGGTCAAGGACAACAACAGATTGGGTAAGTTTGAGTTGACTGGCAT 898091 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC--TTTCGATATCGATGCCAAT 552569 |||||||||||||||||| || || |||||||| ||||| |||| || ||||||||| Sbjct 898092 TCCTCCTGCTCCTCGTGGTGTTCCTCAAATTGAGGTTACCTTTTCCTTA--GATGCCAAT 898149 Query 552570 GGAATTTTGAATGT 552583 || ||| | || || Sbjct 898150 GGTATTCTTAAGGT 898163 Score = 120 bits (132), Expect = 2e-21 Identities = 192/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 |||||| |||||| |||| | | |||||| ||||| |||||| | ||| ||||| Sbjct 1488232 GATTGGAATATTTCCAGAAACCGTTATTGGGGTACTCCTATTCCATTGTGGGTCTCTGAG 1488173 Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGG-TGT 368702 || |||||||||||| ||| | ||||| ||| | |||||| ||||||| || || || Sbjct 1488172 GACTTTGAAGAAATTGTCTGTGTTGGTTCCATTGATGAATTGAAAGAATTGTCAGGACGT 1488113 Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762 | | | |||| |||| | ||| ||| | ||||| |||| ||||| || || Sbjct 1488112 G-ATGACATTACTGATATCCATCGTGAGAGTATTGACTCTATTACTATTCCTTCGAAATT 1488054 Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822 || || || ||| || | |||| || || || || |||||||| ||||| || Sbjct 1488053 GGGTAAGGGCAACTTGAAGAGAATCGAAGAGGTGTTTGACTGTTGGTTTGAGTCAGGCTC 1487994 Query 368823 TATGCCTTATGGTCAAATACATTATCCATTTGA 368855 ||||||||||| | | || ||||||||||| Sbjct 1487993 TATGCCTTATGCTTCCAAGCACTATCCATTTGA 1487961 Score = 105 bits (116), Expect = 5e-17 Identities = 139/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTA-ATTTGTCATTGGCATTTCTTACGG 390865 || |||||||| |||||||| ||| ||||||| | || || || |||||| || Sbjct 1591837 ATCAATACCATCTTCACCATAGACAAATTGAATGACATCACCCAATGAG-TTTCTTGTGG 1591779 Query 390866 TACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAAC 390925 |||| || || | || |||| |||||||| || ||||| | ||| ||||||| Sbjct 1591778 TACCGTCGTAGTGAACCATAATATCTTCTAAAGCCTTGACTAAACGACGTTGAATATAAC 1591719 Query 390926 CAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGA 390985 |||| || || ||||| | || |||| ||| | ||||||||| || |||||| | || | Sbjct 1591718 CAGTTTCAGCGGTTTTCACAGCTGTATCAATTAAACCTTCTCTACCAGCCATAGCGTGAA 1591659 Query 390986 AGAAAAATTC 390995 |||||||||| Sbjct 1591658 AGAAAAATTC 1591649 Score = 91.5 bits (100), Expect = 1e-12 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 434548 TTTTCGGATAAtttttttGTGTGTATTTCAAAAATTTTAACACGACCAGATTTATTTGGA 434607 || || |||||||| | || || || | ||||| | | |||||| || || ||| Sbjct 455524 TTCTCTGATAATTTGCTGGTATGGATAGCCAAAATGTCACGACGACCTTTTTCATCTGGG 455583 Query 434608 AGATCAATTTTAATATGAACACCAAATCTCCCCGAACG-AATAACTGCAGGATCTAATAA 434666 || |||||| ||| |||| ||||||| || | ||| |||||| |||| ||| | || Sbjct 455584 AGGGCAATTTCAATCTGAATCTCAAATCTACCTGGACGTAATAAC-GCAGAATCGATCAA 455642 Query 434667 TTCTAATCTATTGGTTATTCCAATGCAAATAAA--ATTATTAAATTGTTCTAATCCATCC 434724 ||||||||||| || || ||||| || |||| |||||| | || || | |||||| Sbjct 455643 GTCTAATCTATTAGTCATACCAAT--AATTAAAACATTATTGAGCTGGTCAACACCATCC 455700 Query 434725 ATTTCTGCTAAAAATTGATTAACAACA 434751 || | | || || |||||||| ||| Sbjct 455701 ATCTTGGACAACAACTGATTAACCACA 455727 >seq5 Length=1501106 Score = 149 bits (164), Expect = 5e-30 Identities = 498/760 (66%), Gaps = 20/760 (3%) Strand=Plus/Minus Query 683992 TTCTAAGGTAATACATACCTGTTTTGAGACCTAATTTATGAGCATATAACAGACATGAAT 684051 |||| ||||| ||||| |||||||| | ||| | ||||| || | || Sbjct 763019 TTCTGAGGTAGTACATGCCTGTTTTCAACCCTTTCTCCCATGCATAAAAGTGGCAACTGG 762960 Query 684052 TTAATTTGGCAAAACTTGGACTTTCGATAAATATATTCATACTCTGTGTTTGATCAATAA 684111 ||||||| ||||| |||| ||| | | | |||||||||||||| ||| ||||||| Sbjct 762959 TTAATTTACCAAAAGTTGGGTTTTGTAAATAAATATTCATACTCTGCAGTTGGTCAATAA 762900 Query 684112 ATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTCCCAAACAGTGC 684171 | | | ||||||||||| ||||| || |||||| || |||||||||||||| Sbjct 762899 ACTTCCCTCTGTCAGCAGCCATATCTATTATGACTTTTTGGGGAATTTCCCAAACAGTTT 762840 Query 684172 GATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGATCC-TCGATAA 684230 ||| | || ||| ||| ||| |||||| | | || || ||| || || | | || Sbjct 762839 TATACAAATTTTTGATACTCTGTGGAATACTGGAAATATTTTGAATAGACCCGTTGTCAA 762780 Query 684231 TATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAAATCCTGAACT 684290 | | || | | | || | ||||| | ||| |||||||| ||||| | | | Sbjct 762779 CAATCAAT-TGGTTTTTTATGGTCAGGTTCCACAAACCCAAATCAATCAAATCTTTCATT 762721 Query 684291 AAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATAAATATTTTCA 684350 ||||||||||| | || | || || |||| ||| | ||| ||| ||||| | Sbjct 762720 AAATATTTATTCACAACTTGGTATTCACCAGATAACACTCGTCTGTTATATATATTGGAA 762661 Query 684351 GTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGGGCATA 684410 || |||| || | ||| |||||| | |||| ||||| || ||| || || |||||| Sbjct 762660 GTGTAGGGTTCAAAGCATTCATTGAATCCCAATATTTGCGATGTAGAGGCCGTAGGCATA 762601 Query 684411 CAAG-TAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATC-ATCAAACTAT 684468 | || | | |||| |||||| | ||| |||| | || || || ||||||||| Sbjct 762600 GGTGCTACTAG-TAAAGAATTTCTTAATCCAAATTTCT-GAACTCGTTCTTTCAAACTAT 762543 Query 684469 CCCAATCCCACATTCCACTTAATTTATCCGA--GC-TAAGATTCCATAAATCAAATTGGA 684525 |||||| ||| || ||| || || || || ||||||||||||||||||| | Sbjct 762542 CCCAAT----CAT--CA---AATAGGTCTGATGGCTTATGATTCCATAAATCAAATTGCA 762492 Query 684526 ATTTTCCTTTGGAAAGAGGACTTCCTATAAATGTTTCATAAGCACCAAATTCTTTGGATA 684585 |||| || | || ||| ||| ||| | |||| ||| | ||| | Sbjct 762491 ATTTACCCTCAGAGGCCGGAGAGCCTTCAAAGCTAGAATAACGACCCTCTGAGATGGCAA 762432 Query 684586 ATTTCATTGATTCTTCCAGACAACCAAAATAAATAGTTTCAAATATTTTACGATTGAGAT 684645 || |||||| ||||| | | || || || || ||||| |||| | ||| || | Sbjct 762431 GTTCGATTGATGTTTCCACAGCAGCATGGTATATCGTCTCAAAAATTTGAATATTAAGTT 762372 Query 684646 CGCGAGCCAATTCAGAATCAAATGGTGTTTTAAAAATCGCAAAA-ACATCCGCTACTCCT 684704 || | || ||||| | | | || |||||||| | |||||| | |||| Sbjct 762371 TTTTGGCTTGTATTGAGTCAAACGATAACCT-CAACTCGCAAAATAAATCCGCGAGTCCT 762313 Query 684705 TGGACACCAACACCAATTGGCCTATGTTTAATATTAGATA 684744 || || |||| | | ||||| | |||||| || ||||||| Sbjct 762312 TGTACTCCAATAGCTATTGGACGATGTTTCATGTTAGATA 762273 >seq1 Length=2974285 Score = 98.7 bits (108), Expect = 8e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||||||||||| ||| || || ||||||||| || | || |||||| |||||| Sbjct 1360608 TACAAGATGAAGCGTAGACTCCTTTTGAATATTGTAGTCTGATAACGTTCTTCCATCTTC 1360667 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || || || ||||| | ||| ||||| || || ||||| || || || || || Sbjct 1360668 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360727 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 ||| || || || ||||| || |||| | || | | || || |||| ||||| Sbjct 1360728 AATCTTGGACTTGACKTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1360786 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| | || || || || ||||||||| Sbjct 1360787 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1360818 Score = 91.5 bits (100), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||||||||||| ||| || || ||||||||| || | || ||||| |||||| Sbjct 1360836 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1360895 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || || || ||||| | ||| ||||| || || ||||| || || || || || Sbjct 1360896 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360955 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 ||| || || || ||||| || |||| | || | | || || |||| ||||| Sbjct 1360956 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361014 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| | || || || || ||||||||| Sbjct 1361015 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1361046 Score = 91.5 bits (100), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||||||||||| ||| || || ||||||||| || | || ||||| |||||| Sbjct 1361064 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361123 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || || || ||||| | ||| ||||| || || ||||| || || || || || Sbjct 1361124 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361183 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 ||| || || || ||||| || |||| | || | | || || |||| ||||| Sbjct 1361184 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361242 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| | || || || || ||||||||| Sbjct 1361243 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1361274 Score = 89.7 bits (98), Expect = 4e-12 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||||||||||| ||| || || ||||||||| || | || ||||| |||||| Sbjct 1361292 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361351 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || || || ||||| | ||| ||||| || || ||||| || || || || || Sbjct 1361352 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361411 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 ||| || || || ||||| || |||| | || | | || || |||| ||||| Sbjct 1361412 AATCTTGGACTTGACGTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361470 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| | || || || || |||||||| Sbjct 1361471 TTCCAGTCAAGGTCTTTACAAAGATTTGCAT 1361501 Score = 87.8 bits (96), Expect = 1e-11 Identities = 223/337 (66%), Gaps = 13/337 (4%) Strand=Plus/Plus Query 428248 AAGTTGTGTAAAGATATATCTTGCGCTTGCGGAA---TCTTTACCTCCTGACATTCTAGT 428304 || || |||||| || |||||||| ||| ||| ||||| ||||||| |||||| Sbjct 1616893 AATTTCTGTAAAAATGTATCTTGC---TGCAGAAAAGTCTTTTCCTCCTGCAGCTCTAGT 1616949 Query 428305 TCCAAATTGTCCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGC 428364 || || ||||| || | || | ||| ||||| || ||| | | |||||||||| Sbjct 1616950 ACCGAAAGCACCATTTGGTTTTAAGATATTTATATTGTTTGATCCAATAAAATTTTGGGC 1617009 Query 428365 CATATTAACAATGGTACTAGTTAAGGATTGTTCACCATGATGATATTTAGTTCTTTTTGA 428424 || || ||| ||| || | || |||||||||||||||||||| | | | || || Sbjct 1617010 CAATCCAATAATTGTAGTAATCAAAGATTGTTCACCATGATGATAATGGGCTTGTTCAGA 1617069 Query 428425 AACTGCACCTTGTAATTCTGATACCTTTATTTCTTCTTTATAAATACCTTCTTCT--ACT 428482 || ||| ||| | | || || ||||| | |||| | || |||| | Sbjct 1617070 TACATAACCAACTAACTGAGCAACTTTAATTTCATTTTTA-----AGGTTTTTCTTGAAA 1617124 Query 428483 GATCCATAAAATACTTTGCGTTGTGATGGTTTGAATCCATCCATAATATTAGGTATAGAT 428542 | ||| | ||||| || |||||| ||||| | ||||||| | || || ||| Sbjct 1617125 CAACCAAACAATACCTTACGTTGTCCAGGTTTAAGCCCATCCAATACGGAGGGAATTGAT 1617184 Query 428543 CTTAAATTATCATCCACTGAGAATGATATTAGTTCTT 428579 || | |||||| ||| ||| ||| | || | |||| Sbjct 1617185 CTGATATTATCTGCCATTGAAAATAAAATCAACTCTT 1617221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294942309800