Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq6 178 1e-38
seq4 159 3e-33
seq5 149 5e-30
seq1 98.7 8e-15
>seq6
Length=1507273
Score = 178 bits (196), Expect = 1e-38
Identities = 459/691 (66%), Gaps = 15/691 (2%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
||||||||||| || | ||||| || || | || ||| | |||||||| |||||||
Sbjct 469523 AGAACTGCTTGTGAGCGTGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCTATTGAG 469464
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| || || | | ||||| ||||| | | || |||| | || |||| ||| ||
Sbjct 469463 ATCGACTCTCTTTACGAGGGTATTGACTTCTACACCTCTATCACCAGAGCCAGATTCGAG 469404
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089
|| | ||| |||||||||||| || | || || || || | || || | ||
Sbjct 469403 GAGTTGTGTCAGGATCTCTTTAGACTGACCTTGGACCCCGTCGAGAAGGTCTTGCGTGAC 469344
Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149
| ||| |||| || ||| || || || ||||| ||||||||||| ||||| |||||
Sbjct 469343 GCCAAGGTTGACAAGTCCGCTGTCCACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATC 469284
Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206
|| || ||| ||| ||| ||| | ||| || ||||| | || |
Sbjct 469283 CCCAAGGTTC---AAAAGTTGGTCTCTGACTTCTTCAACGGTAAGGAGCCTAACAGATCC 469227
Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266
| || || ||||| |||||||| || |||||||| | || || || |||||||| ||
Sbjct 469226 ATCAACCCCGATGAAGCTGTTGCTTACGGTGCCGCTGTCCAGGCTGCCATTCTTTCCGGT 469167
Query 552267 CAAACTGATGA----AAAACTACAAAATATTGTACTTGTAG-ATGTTACTCCTCTATCTC 552321
| ||| | || ||| || || |||| |||| | ||||| | || || ||
Sbjct 469166 GACACTTCTTCTACCAAGACT-CAGGAT-TTGTTGTTGTTGGATGTTGCCCCCCTTTCCT 469109
Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381
| ||| | || || | ||| ||||| ||||| || | ||| ||||| ||||||| |
Sbjct 469108 TGGGTATTGAGACTGCTGGTGGTATCATGACCAAGTTGATCCCCAGAAACTCTACTATCC 469049
Query 552382 CTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440
|| || || ||| | | ||| ||||| || | || || || ||| |||| ||
Sbjct 469048 CTACCAAGAAGTCT-GAGACTTTCTCTACTTACGCTGACAACCAGCCTGGTGTTCTTATC 468990
Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500
|| | ||||| || || | || || || || || ||||||| || |
Sbjct 468989 CAGGTATTTGAGGGTGAGCGTGCCAAGACCAAGGACAACAACTTGCTTGGTAAGTTCGAG 468930
Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560
|| || |||||||||||||||||||| || || || ||||| |||||||| || ||
Sbjct 468929 TTGTCTGGCATTCCTCCTGCTCCTCGTGGTGTTCCCCAGATTGAGGTTACTTTTGACATT 468870
Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTT 552591
||||||||||| ||| | || || ||||||
Sbjct 468869 GATGCCAATGGTATTCTTAACGTCTCTGCTT 468839
Score = 125 bits (138), Expect = 6e-23
Identities = 360/542 (66%), Gaps = 15/542 (3%)
Strand=Plus/Plus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATGGTAA 550050
||||| ||||| |||||||| || || || |||||||| | ||| | | |
Sbjct 1359186 GCTATCGGTATCGATTTAGGTACTACCTACTCTTGTGTTGCGACTTTCG----ACTCTGC 1359241
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|||||| || || || || || |||||||||||| ||| ||||| | |||| | |||||
Sbjct 1359242 AGTTGAGATCATCGCTAACGAGCAAGGTAACAGAGTTACCCCATCGTTTGTTGCCTTCAC 1359301
Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169
|| | ||| | |||||||||| || || | || ||| || || || | |
Sbjct 1359302 TCCCGAGGAGAGATTGA-TTGGTGATGCTGCTAAGAACCAGGCCGCTTTGAACCCCAAGA 1359360
Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229
| || |||| ||||| || ||||| ||||| | |||| ||||| | | || |||
Sbjct 1359361 ACACCGTTTTCGATGCCAAGCGTTTGATTGGTCGTGGTTTCGATGATGAGTCCGTCCAGA 1359420
Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289
| || || ||| ||||||||| | |||| |||| || || || | ||||| |
Sbjct 1359421 CTGACATCAAGTCGTGGCCTTTCAAGGTTGTCAATGCCAACGGTAACCCCCAGATTGAGG 1359480
Query 550290 CT-ACT-CATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTT 550346
| | | | || |||| | || ||| || || | | || || ||||||||||
Sbjct 1359481 TTGAGTACTTGGAGGA---GACCAAGTCTTTCTCTCCTCAGGAGATCTCTTCTATGGTTT 1359537
Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405
| | || ||||| | | ||| ||| ||||| ||||| ||| | | || ||
Sbjct 1359538 TGACCAAGATGAAGGAGATTGCCGAGGCTAAGATTGGT-AAGAAGGTTGAGAAGGCCGTT 1359596
Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465
| || || || ||||| ||||| || | || | ||||| || || ||||||||
Sbjct 1359597 GTTACCGTTCCTGCATACTTTAACGATGCCCAGAGACAAGCCACCAAGGATGCTGGTGCC 1359656
Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525
|| |||||| | || ||| | ||||| || || || |||||||| ||||| |||| ||
Sbjct 1359657 ATCGCTGGATTGAACGTTTTGCGTATCATTAACGAGCCTACTGCCGCTGCTATTGCCTAC 1359716
Query 550526 GG 550527
||
Sbjct 1359717 GG 1359718
Score = 123 bits (136), Expect = 2e-22
Identities = 414/632 (66%), Gaps = 27/632 (4%)
Strand=Plus/Minus
Query 549929 AATTAAATA-ATTTAAAGATATGAATCTTATATTTTGACATAAGATATAATGTCAAACAA 549987
|||||| || ||| | |||||| || | |||||||| ||| |||||| ||
Sbjct 470351 AATTAATTATATTCATAGATATACATTTCTTATTTTGATT----ATACAATGTCTAA--- 470299
Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATG 550046
|||| | || || |||||||| || || || |||||||| | || || || |
Sbjct 470298 ---AGCTGTCGGAATTGATTTAGGTACAACTTACTCTTGTGTTGCGCACTTTGCCAAC-G 470243
Query 550047 GTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTT 550106
| |||||| ||||||||||| || || ||||||||||||||||| || | ||| ||
Sbjct 470242 ACAGAGTTGAGATTATTGCCAACGACCAGGGTAACAGAACTACTCCCTCGTTCGTTGGTT 470183
Query 550107 TCACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT 550165
|||| || ||||| | ||| | ||||||| || || || | || ||| | || |||
Sbjct 470182 TCACAGACACTGAGAGATTGA-TTGGTGACGCCGCCAAGAACCAGGCCGCCATGAACCCT 470124
Query 550166 ACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTT 550225
| || ||| | ||||| || || ||||| ||||| |||| || | |||| | ||
Sbjct 470123 GCTAACACTGTCTTTGACGCCAAGCGTTTGATTGGTAGAAAATTCAGTGATGAGGAGGTC 470064
Query 550226 CAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT 550285
||| | || ||||| | || ||| | |||| | ||| || || | ||
Sbjct 470063 CAGTCTGACGCTAAGCACTTCCCCTTCAAGGTTGTCGACAAGGGTGGTAAGCCCAACATC 470004
Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTAT 550341
| | | | |||| | | | ||| |||||| || ||| |||| || || ||
Sbjct 470003 CAGGTTGAGTA-CAAGGGTGAG---ACCAAGGTTTTCACTCCCGAAGAAATCTCTTCCAT 469948
Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG--TCAAGAAGTTACGGAT 550399
| | || || ||||| | || || | || |||| |||| |||| |||
Sbjct 469947 GATCTTGGGTAAGATGAAGGAGACCGCTGAGGGATTCCTTGGCTGCAAG--GTTAACGAT 469890
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || | || || || || || ||||| ||||| ||| | ||||| || || ||||||
Sbjct 469889 GCCGTCGTCACCGTCCCTGCTTACTTTAACGACTCTCAAAGACAAGCCACCAAGGATGCT 469830
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| |||||||| | || ||| | | ||||| || || || ||||| || || ||
Sbjct 469829 GGTTTGATTGCTGGCTTGAACGTTATGAGAATTATTAACGAGCCCACTGCCGCCGCCATT 469770
Query 550520 GCATATGGACTTGATAAACATAATGATCAAGA 550551
|| || || | || || | |||| |||||
Sbjct 469769 GCTTACGGTTTGGACAAGAAGGATGAGCAAGA 469738
>seq4
Length=1642203
Score = 159 bits (176), Expect = 3e-33
Identities = 370/549 (67%), Gaps = 14/549 (3%)
Strand=Plus/Plus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| ||||| ||||| || ||||| || ||||||||||| | ||||||||| |||
Sbjct 896728 ATTGGTATTGATTTGGGTACCACTTACTCATGTGTTGGTGTGATGAAAAATGGTAGGGTT 896787
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||||||| ||||||| || |||||||||| ||||||||| ||||| | || || ||
Sbjct 896788 GAAATTATTCCCAATGAACAGGGTAACAGAATTACTCCATCGTATGTGGCATTTACCGAC 896847
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
| |||| |||||| |||||||| || || | ||||| || || | || ||
Sbjct 896848 AAGGAACGTTTAGTCGGTGATGCCGCCAAGAACCAAGCTTCTATGAACCACGAGAACACC 896907
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|| |||||| |||| | ||||||||| || |||| ||| || || || ||
Sbjct 896908 ATCTTTGATTCTAAGAGATTAATTGGATCAAAGTTTAGTGACTCTGTCGTACAAAAGGAG 896967
Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC- 550293
|| ||||||| ||| | | || | | || ||| ||||| | ||| | ||
Sbjct 896968 ATTAAGCATTTGCCATACAAAGTCTTGAAAAAGGATGGCAAACCCGTCACTGAGGTCACC 897027
Query 550294 -TCATGAAGGATCTGTTAA-ACAATTTTCACCA--GAACAAATTTCATCTATGGTTTTAA 550349
|||| || || || | | |||||| | || ||||||| | ||| |||| |
Sbjct 897028 TACATG--GG---TGAGAAGAAGACTTTCACTATGGAGGAAATTTCTGCCATGATTTTGA 897082
Query 550350 TGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAAT 550407
||||||| | || || | || |||| |||||| ||||| | || || |
Sbjct 897083 GTGAAATGAAGAGTATTGCTCA--GAATTACTTGGGCAAGAATGTTACTCACGCCGTGGT 897140
Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467
||||| || || ||||| ||||| | ||| | ||||| || || || || || ||
Sbjct 897141 CACTGTTCCTGCGTATTTCAATGATGCTCAAAGACAAGCAACCAAGGACGCCGGTACAAT 897200
Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|||||| | ||||| | | ||| | ||||| || ||||| |||||| |||| || ||
Sbjct 897201 TGCTGGGTTGAATGTGTTGAGAATTGTTAATGAGCCCACTGCAGCTGCAATTGCCTACGG 897260
Query 550528 ACTTGATAA 550536
| | || ||
Sbjct 897261 ATTAGACAA 897269
Score = 138 bits (152), Expect = 9e-27
Identities = 442/674 (66%), Gaps = 30/674 (4%)
Strand=Plus/Plus
Query 551922 GAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTA 551981
|||| |||||| ||||||||||| || | | ||| |||||| | ||||||||
Sbjct 897508 GAAAAAGCCAAGAGAGCTCTTTCAGCTCAATCCATAGCCAGAATTGAAATTGATTCATTT 897567
Query 551982 TTTGAGGGAATTGATTATAATACGC--CTATTTCGAGGGCCAAATTTGAAGATATTTGTT 552039
| | || ||||| | | || || |||| || || || |||||||| ||| |
Sbjct 897568 GTCAATGGTGTTGATCTT--TCCGAAACTCTTTCTAGAGCTAAGTTTGAAGA-ATTGAAT 897624
Query 552040 CTGATCTC-TTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGAT 552097
|| | |||| || || ||||| || || ||||| ||||| | ||| | || ||
Sbjct 897625 ATGGAAGCATTTAAGAAGACT-TTGAAGCCTGTTGAACAGGTTTTGAAGGATGCCAACAT 897683
Query 552098 TGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAAT 552157
| || || || | |||| ||||| ||||| ||||| || || ||||| || || |
Sbjct 897684 GAAGAAGTCTGAAATTGATGACATTGTACTTGTGGGTGGTTCCACCAGAATCCCCAAGGT 897743
Query 552158 TCGCGAAATGTT----AAGTTCTTATTTCAATGGTAAAAAA--TTAAATGAAAGTGTTAA 552211
|| || | || ||||| |||| | || || || || | | || | ||
Sbjct 897744 TCAAGAGTTATTGGAGAAGTT----TTTCGACGGAAAGAAGGCTTCCAAGG--GTATCAA 897797
Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271
|| |||||||| || || |||||||| || ||||||| | | || | |||| || |
Sbjct 897798 CCCTGATGAGGCAGTGGCTTATGGTGCTGCTGTTCAAGCTGGTGTTTTGGCTGGTGAAGC 897857
Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331
| || | || |||||||| | | ||||| | || | | |||||| | ||
Sbjct 897858 GGGTG------TTGAAGATATTGTATTATTGGATGTCAACCCCTTGACCCTTGGTATTGA 897911
Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391
||| ||| ||| | ||||||| | || | ||||| ||| |||||||| || ||
Sbjct 897912 AACCACTGGTGGTGTCATGACTACCTTGATTAACAGAAACACTGCTATTCCTACCAAGAA 897971
Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451
||| | | || ||||| | | ||||| || | | || |||||| ||| |||
Sbjct 897972 ATCCCAGATTTTCTCTACTGCTGCTGATAACCAGCCCACAGTATTGATTCAAGTTTATGA 898031
Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511
||| ||| | ||| || || || || | | |||| ||| | || || ||
Sbjct 898032 AGGTGAACGTGCATTGGTCAAGGACAACAACAGATTGGGTAAGTTTGAGTTGACTGGCAT 898091
Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC--TTTCGATATCGATGCCAAT 552569
|||||||||||||||||| || || |||||||| ||||| |||| || |||||||||
Sbjct 898092 TCCTCCTGCTCCTCGTGGTGTTCCTCAAATTGAGGTTACCTTTTCCTTA--GATGCCAAT 898149
Query 552570 GGAATTTTGAATGT 552583
|| ||| | || ||
Sbjct 898150 GGTATTCTTAAGGT 898163
Score = 120 bits (132), Expect = 2e-21
Identities = 192/273 (70%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643
|||||| |||||| |||| | | |||||| ||||| |||||| | ||| |||||
Sbjct 1488232 GATTGGAATATTTCCAGAAACCGTTATTGGGGTACTCCTATTCCATTGTGGGTCTCTGAG 1488173
Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGG-TGT 368702
|| |||||||||||| ||| | ||||| ||| | |||||| ||||||| || || ||
Sbjct 1488172 GACTTTGAAGAAATTGTCTGTGTTGGTTCCATTGATGAATTGAAAGAATTGTCAGGACGT 1488113
Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762
| | | |||| |||| | ||| ||| | ||||| |||| ||||| || ||
Sbjct 1488112 G-ATGACATTACTGATATCCATCGTGAGAGTATTGACTCTATTACTATTCCTTCGAAATT 1488054
Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822
|| || || ||| || | |||| || || || || |||||||| ||||| ||
Sbjct 1488053 GGGTAAGGGCAACTTGAAGAGAATCGAAGAGGTGTTTGACTGTTGGTTTGAGTCAGGCTC 1487994
Query 368823 TATGCCTTATGGTCAAATACATTATCCATTTGA 368855
||||||||||| | | || |||||||||||
Sbjct 1487993 TATGCCTTATGCTTCCAAGCACTATCCATTTGA 1487961
Score = 105 bits (116), Expect = 5e-17
Identities = 139/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 390807 ATTAATACCATTATCACCATATACACATTGAATTA-ATTTGTCATTGGCATTTCTTACGG 390865
|| |||||||| |||||||| ||| ||||||| | || || || |||||| ||
Sbjct 1591837 ATCAATACCATCTTCACCATAGACAAATTGAATGACATCACCCAATGAG-TTTCTTGTGG 1591779
Query 390866 TACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAAC 390925
|||| || || | || |||| |||||||| || ||||| | ||| |||||||
Sbjct 1591778 TACCGTCGTAGTGAACCATAATATCTTCTAAAGCCTTGACTAAACGACGTTGAATATAAC 1591719
Query 390926 CAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGA 390985
|||| || || ||||| | || |||| ||| | ||||||||| || |||||| | || |
Sbjct 1591718 CAGTTTCAGCGGTTTTCACAGCTGTATCAATTAAACCTTCTCTACCAGCCATAGCGTGAA 1591659
Query 390986 AGAAAAATTC 390995
||||||||||
Sbjct 1591658 AGAAAAATTC 1591649
Score = 91.5 bits (100), Expect = 1e-12
Identities = 147/207 (71%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 434548 TTTTCGGATAAtttttttGTGTGTATTTCAAAAATTTTAACACGACCAGATTTATTTGGA 434607
|| || |||||||| | || || || | ||||| | | |||||| || || |||
Sbjct 455524 TTCTCTGATAATTTGCTGGTATGGATAGCCAAAATGTCACGACGACCTTTTTCATCTGGG 455583
Query 434608 AGATCAATTTTAATATGAACACCAAATCTCCCCGAACG-AATAACTGCAGGATCTAATAA 434666
|| |||||| ||| |||| ||||||| || | ||| |||||| |||| ||| | ||
Sbjct 455584 AGGGCAATTTCAATCTGAATCTCAAATCTACCTGGACGTAATAAC-GCAGAATCGATCAA 455642
Query 434667 TTCTAATCTATTGGTTATTCCAATGCAAATAAA--ATTATTAAATTGTTCTAATCCATCC 434724
||||||||||| || || ||||| || |||| |||||| | || || | ||||||
Sbjct 455643 GTCTAATCTATTAGTCATACCAAT--AATTAAAACATTATTGAGCTGGTCAACACCATCC 455700
Query 434725 ATTTCTGCTAAAAATTGATTAACAACA 434751
|| | | || || |||||||| |||
Sbjct 455701 ATCTTGGACAACAACTGATTAACCACA 455727
>seq5
Length=1501106
Score = 149 bits (164), Expect = 5e-30
Identities = 498/760 (66%), Gaps = 20/760 (3%)
Strand=Plus/Minus
Query 683992 TTCTAAGGTAATACATACCTGTTTTGAGACCTAATTTATGAGCATATAACAGACATGAAT 684051
|||| ||||| ||||| |||||||| | ||| | ||||| || | ||
Sbjct 763019 TTCTGAGGTAGTACATGCCTGTTTTCAACCCTTTCTCCCATGCATAAAAGTGGCAACTGG 762960
Query 684052 TTAATTTGGCAAAACTTGGACTTTCGATAAATATATTCATACTCTGTGTTTGATCAATAA 684111
||||||| ||||| |||| ||| | | | |||||||||||||| ||| |||||||
Sbjct 762959 TTAATTTACCAAAAGTTGGGTTTTGTAAATAAATATTCATACTCTGCAGTTGGTCAATAA 762900
Query 684112 ATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTCCCAAACAGTGC 684171
| | | ||||||||||| ||||| || |||||| || ||||||||||||||
Sbjct 762899 ACTTCCCTCTGTCAGCAGCCATATCTATTATGACTTTTTGGGGAATTTCCCAAACAGTTT 762840
Query 684172 GATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGATCC-TCGATAA 684230
||| | || ||| ||| ||| |||||| | | || || ||| || || | | ||
Sbjct 762839 TATACAAATTTTTGATACTCTGTGGAATACTGGAAATATTTTGAATAGACCCGTTGTCAA 762780
Query 684231 TATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAAATCCTGAACT 684290
| | || | | | || | ||||| | ||| |||||||| ||||| | | |
Sbjct 762779 CAATCAAT-TGGTTTTTTATGGTCAGGTTCCACAAACCCAAATCAATCAAATCTTTCATT 762721
Query 684291 AAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATAAATATTTTCA 684350
||||||||||| | || | || || |||| ||| | ||| ||| ||||| |
Sbjct 762720 AAATATTTATTCACAACTTGGTATTCACCAGATAACACTCGTCTGTTATATATATTGGAA 762661
Query 684351 GTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGGGCATA 684410
|| |||| || | ||| |||||| | |||| ||||| || ||| || || ||||||
Sbjct 762660 GTGTAGGGTTCAAAGCATTCATTGAATCCCAATATTTGCGATGTAGAGGCCGTAGGCATA 762601
Query 684411 CAAG-TAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATC-ATCAAACTAT 684468
| || | | |||| |||||| | ||| |||| | || || || |||||||||
Sbjct 762600 GGTGCTACTAG-TAAAGAATTTCTTAATCCAAATTTCT-GAACTCGTTCTTTCAAACTAT 762543
Query 684469 CCCAATCCCACATTCCACTTAATTTATCCGA--GC-TAAGATTCCATAAATCAAATTGGA 684525
|||||| ||| || ||| || || || || ||||||||||||||||||| |
Sbjct 762542 CCCAAT----CAT--CA---AATAGGTCTGATGGCTTATGATTCCATAAATCAAATTGCA 762492
Query 684526 ATTTTCCTTTGGAAAGAGGACTTCCTATAAATGTTTCATAAGCACCAAATTCTTTGGATA 684585
|||| || | || ||| ||| ||| | |||| ||| | ||| |
Sbjct 762491 ATTTACCCTCAGAGGCCGGAGAGCCTTCAAAGCTAGAATAACGACCCTCTGAGATGGCAA 762432
Query 684586 ATTTCATTGATTCTTCCAGACAACCAAAATAAATAGTTTCAAATATTTTACGATTGAGAT 684645
|| |||||| ||||| | | || || || || ||||| |||| | ||| || |
Sbjct 762431 GTTCGATTGATGTTTCCACAGCAGCATGGTATATCGTCTCAAAAATTTGAATATTAAGTT 762372
Query 684646 CGCGAGCCAATTCAGAATCAAATGGTGTTTTAAAAATCGCAAAA-ACATCCGCTACTCCT 684704
|| | || ||||| | | | || |||||||| | |||||| | ||||
Sbjct 762371 TTTTGGCTTGTATTGAGTCAAACGATAACCT-CAACTCGCAAAATAAATCCGCGAGTCCT 762313
Query 684705 TGGACACCAACACCAATTGGCCTATGTTTAATATTAGATA 684744
|| || |||| | | ||||| | |||||| || |||||||
Sbjct 762312 TGTACTCCAATAGCTATTGGACGATGTTTCATGTTAGATA 762273
>seq1
Length=2974285
Score = 98.7 bits (108), Expect = 8e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324
|||||||||||| ||| || || ||||||||| || | || |||||| ||||||
Sbjct 1360608 TACAAGATGAAGCGTAGACTCCTTTTGAATATTGTAGTCTGATAACGTTCTTCCATCTTC 1360667
Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384
| ||| || || || ||||| | ||| ||||| || || ||||| || || || || ||
Sbjct 1360668 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360727
Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443
||| || || || ||||| || |||| | || | | || || |||| |||||
Sbjct 1360728 AATCTTGGACTTGACKTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1360786
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||||| | || || || || |||||||||
Sbjct 1360787 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1360818
Score = 91.5 bits (100), Expect = 1e-12
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324
|||||||||||| ||| || || ||||||||| || | || ||||| ||||||
Sbjct 1360836 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1360895
Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384
| ||| || || || ||||| | ||| ||||| || || ||||| || || || || ||
Sbjct 1360896 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360955
Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443
||| || || || ||||| || |||| | || | | || || |||| |||||
Sbjct 1360956 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361014
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||||| | || || || || |||||||||
Sbjct 1361015 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1361046
Score = 91.5 bits (100), Expect = 1e-12
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324
|||||||||||| ||| || || ||||||||| || | || ||||| ||||||
Sbjct 1361064 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361123
Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384
| ||| || || || ||||| | ||| ||||| || || ||||| || || || || ||
Sbjct 1361124 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361183
Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443
||| || || || ||||| || |||| | || | | || || |||| |||||
Sbjct 1361184 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361242
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||||| | || || || || |||||||||
Sbjct 1361243 TTCCAGTCAAGGTCTTGACAAAGATTTGCATA 1361274
Score = 89.7 bits (98), Expect = 4e-12
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324
|||||||||||| ||| || || ||||||||| || | || ||||| ||||||
Sbjct 1361292 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361351
Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384
| ||| || || || ||||| | ||| ||||| || || ||||| || || || || ||
Sbjct 1361352 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361411
Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443
||| || || || ||||| || |||| | || | | || || |||| |||||
Sbjct 1361412 AATCTTGGACTTGACGTTGTCAATAGTGTCAGAG-GATTCAACCTCAAGGGTAATAGTTT 1361470
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| ||||| | || || || || ||||||||
Sbjct 1361471 TTCCAGTCAAGGTCTTTACAAAGATTTGCAT 1361501
Score = 87.8 bits (96), Expect = 1e-11
Identities = 223/337 (66%), Gaps = 13/337 (4%)
Strand=Plus/Plus
Query 428248 AAGTTGTGTAAAGATATATCTTGCGCTTGCGGAA---TCTTTACCTCCTGACATTCTAGT 428304
|| || |||||| || |||||||| ||| ||| ||||| ||||||| ||||||
Sbjct 1616893 AATTTCTGTAAAAATGTATCTTGC---TGCAGAAAAGTCTTTTCCTCCTGCAGCTCTAGT 1616949
Query 428305 TCCAAATTGTCCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGC 428364
|| || ||||| || | || | ||| ||||| || ||| | | ||||||||||
Sbjct 1616950 ACCGAAAGCACCATTTGGTTTTAAGATATTTATATTGTTTGATCCAATAAAATTTTGGGC 1617009
Query 428365 CATATTAACAATGGTACTAGTTAAGGATTGTTCACCATGATGATATTTAGTTCTTTTTGA 428424
|| || ||| ||| || | || |||||||||||||||||||| | | | || ||
Sbjct 1617010 CAATCCAATAATTGTAGTAATCAAAGATTGTTCACCATGATGATAATGGGCTTGTTCAGA 1617069
Query 428425 AACTGCACCTTGTAATTCTGATACCTTTATTTCTTCTTTATAAATACCTTCTTCT--ACT 428482
|| ||| ||| | | || || ||||| | |||| | || |||| |
Sbjct 1617070 TACATAACCAACTAACTGAGCAACTTTAATTTCATTTTTA-----AGGTTTTTCTTGAAA 1617124
Query 428483 GATCCATAAAATACTTTGCGTTGTGATGGTTTGAATCCATCCATAATATTAGGTATAGAT 428542
| ||| | ||||| || |||||| ||||| | ||||||| | || || |||
Sbjct 1617125 CAACCAAACAATACCTTACGTTGTCCAGGTTTAAGCCCATCCAATACGGAGGGAATTGAT 1617184
Query 428543 CTTAAATTATCATCCACTGAGAATGATATTAGTTCTT 428579
|| | |||||| ||| ||| ||| | || | ||||
Sbjct 1617185 CTGATATTATCTGCCATTGAAAATAAAATCAACTCTT 1617221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294942309800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |