Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
>seq1
Length=2974285
Score = 127 bits (140), Expect = 2e-24
Identities = 478/740 (65%), Gaps = 16/740 (2%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || ||||| || || | ||||| |||||||||| || ||||||||| |
Sbjct 233331 CATAACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTTCCTGC 233272
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991
| || || ||||||||||| ||||| ||||||| ||| || | | | ||
Sbjct 233271 CAACGAAATGTTTTCCATAAAGTCAAAGGGATTAGTAACATTGTAAACCTTT-TCGTTGC 233213
Query 36992 -TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050
|||| | || | || || |||||||| || | ||| | ||||| | || | |||
Sbjct 233212 CTAATGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAATTTACAGT 233153
Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACA 37109
| ||||| | | | || | ||||| |||| || | |||| | || ||
Sbjct 233152 TCATACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTT-CAATAGCAACG 233094
Query 37110 GCATCTTTAACTATATTA---ACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATT 37164
|| ||| | | || || |||||| | | || ||| | |||| || |
Sbjct 233093 GCCTCTGTGATAATCTTCTCGACAATAGCAGCATC-----GGGTCTGTTTTGCAAGTGGG 233039
Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224
|| || || || |||||||| || ||||| ||||| | | || || || || |
Sbjct 233038 AGAATAACAAGCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGTTGG 232979
Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284
| || || || || ||||| || ||||| || || | |||||| || | |||||| ||||
Sbjct 232978 AGAAAGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACGATC 232919
Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344
|| ||||||||||||||||| || |||||||| ||||||||| | | ||| | |
Sbjct 232918 CACTGAAGAAAATACCTTCAACAGCAGCAAATGCAACAAGACGT-TCGCCAAATAAGGCC 232860
Query 37345 T-ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTT 37403
| | |||| ||||| | | ||| || ||||| ||| | || ||| ||
Sbjct 232859 TCGTCATCACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAGTC 232800
Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463
||||| || || || | ||||| | || | || | ||||| || || || |
Sbjct 232799 TCAATAGCATTGAATAAAAAGTCTGCCTCCTTGGGGTCCTTGATATAGGTGTCGATCAAC 232740
Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523
|| || | || ||||| |||||||| || || || ||||| ||||| || |
Sbjct 232739 AAGGAGTAGGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCATTTG 232680
Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583
||||| | | ||||| ||| | | || ||| | ||||| || ||||| || |||
Sbjct 232679 GCTTCTGGAATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAATACCA 232620
Query 37584 TCACTAGCTGCAAAGAAAGC 37603
|| ||| || || || ||
Sbjct 232619 TCGGAAGCAGCGAAAAATGC 232600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316651920800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |