Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 84.2 2e-11
>seq6
Length=1507273
Score = 84.2 bits (92), Expect = 2e-11
Identities = 201/299 (67%), Gaps = 4/299 (1%)
Strand=Plus/Plus
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048
|| |||||||| || | ||||| ||||| | |||||| | || ||| |||
Sbjct 987153 ACATAAAACTGGCAGAAAACATGGCATGGAGGTAAAGCCATTTTACTGAAATCTGCAGGG 987212
Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108
||||| || ||| ||| || | | || | |||||| || ||| || | |
Sbjct 987213 TTCCAAGCCGACATGATAATTCTTCGATCGTATGGGTTATTTTTGAGCTTGTTTATAACA 987272
Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGC 30167
| || |||||||| || ||| |||| | |||||||| ||| ||| |||| || ||
Sbjct 987273 TCCTGTAGCTGATCTACACCCTTCCCAGTGTAGTCTGTG-TCACAGTCTTTGTATTCGGC 987331
Query 30168 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30227
||| ||||| | ||| || ||||| || || ||||||| ||| ||||| | || ||
Sbjct 987332 TCCAAAATGGCGCCATTGAAACCCATAAACGGGTCCCAAGTCGCCCTCGCGGCGGT-CTG 987390
Query 30228 GAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285
|||||| | ||| || | || | || ||||| | |||||||||||||| |||
Sbjct 987391 TGAGCCCCAACGAGTCTAAGTACTCACGAGACCCGTTTCCCTCCCAGATCTTTACACCC 987449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617500399460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |