Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=1507273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 201/299 (67%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 || |||||||| || | ||||| ||||| | |||||| | || ||| ||| Sbjct 987153 ACATAAAACTGGCAGAAAACATGGCATGGAGGTAAAGCCATTTTACTGAAATCTGCAGGG 987212 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108 ||||| || ||| ||| || | | || | |||||| || ||| || | | Sbjct 987213 TTCCAAGCCGACATGATAATTCTTCGATCGTATGGGTTATTTTTGAGCTTGTTTATAACA 987272 Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGC 30167 | || |||||||| || ||| |||| | |||||||| ||| ||| |||| || || Sbjct 987273 TCCTGTAGCTGATCTACACCCTTCCCAGTGTAGTCTGTG-TCACAGTCTTTGTATTCGGC 987331 Query 30168 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30227 ||| ||||| | ||| || ||||| || || ||||||| ||| ||||| | || || Sbjct 987332 TCCAAAATGGCGCCATTGAAACCCATAAACGGGTCCCAAGTCGCCCTCGCGGCGGT-CTG 987390 Query 30228 GAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285 |||||| | ||| || | || | || ||||| | |||||||||||||| ||| Sbjct 987391 TGAGCCCCAACGAGTCTAAGTACTCACGAGACCCGTTTCCCTCCCAGATCTTTACACCC 987449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617500399460