Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6 196 3e-44 seq4 154 1e-31 seq1 120 2e-21 seq7 100 2e-15 seq5 100 2e-15 >seq6 Length=1507273 Score = 196 bits (216), Expect = 3e-44 Identities = 600/917 (65%), Gaps = 17/917 (2%) Strand=Plus/Minus Query 475326 CTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATC 475385 |||| || || | || |||||| ||||| || | | || || || || | || Sbjct 469690 CTTTGCTTTCTATTGAGGATGGTATTTTCGAGGTCAAGTCCACTGCCGGTGACACTCACT 469631 Query 475386 TTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAG 475443 | |||||||| ||||| || | | ||||| | || | |||| | || |||||||| Sbjct 469630 TGGGTGGTGAGGATTTCGACCACCGTCTTGTTAACCAC--TTTGTTAACGAGTTCAAGAG 469573 Query 475444 GAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTGCT 475501 || || || ||| | || || | | | | ||| || ||| | | ||||||||| Sbjct 469572 AAAGAACAAGAAGGATTTGTCCACCAACCAG--AGAGCTTTGAGAAGATTGAGAACTGCT 469515 Query 475502 TGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCT 475561 ||||| ||||| ||| || || | |||||| || ||||||| || |||| | || ||| Sbjct 469514 TGTGAGCGTGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCTATTGAGATCGACTCT 469455 Query 475562 CTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTG 475620 |||| || || ||||| || || |||| || || || || | ||| || || | || Sbjct 469454 CTTTACGAGGGTATTGACTTCTACACCTCT-ATCACCAGAGCCAGATTCGAGGAGTTGTG 469396 Query 475621 TTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACT 475680 | |||||||||||| || | || ||||| || | || | | || | || | Sbjct 469395 TCAGGATCTCTTTAGACTGACCTTGGACCCCGTCGAGAAGGTCTTGCGTGACGCCAAGGT 469336 Query 475681 TGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAAT 475740 |||||| || ||||| || ||||| ||||| || ||||| || ||||| || || | Sbjct 469335 TGACAAGTCCGCTGTCCACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATCCCCAAGGT 469276 Query 475741 AAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGA 475800 | | || | || | || || ||||| || || | | || || || Sbjct 469275 TCAAAAGTTGGTCTCTGACTTCTTCAACGGTAAGGAGCCTAACAGATCCATCAACCCCGA 469216 Query 475801 TGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAATCAGAC 475858 |||||||||||| || || || |||||||| || || ||| | || ||| || | | Sbjct 469215 TGAAGCTGTTGCTTACGGTGCCGCTGTCCAGGCTGCCATTCTTTCCGGTGACACTTCTTC 469156 Query 475859 GA--GAAACTAAATAATATTGTACTTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAA 475915 | | ||| | | |||| ||||| || || | || ||||| || ||| |||| Sbjct 469155 TACCAAGACTCAGGA--TTTGTTGTTGTTGGATGTTGCCCCCCTTTCCTTGGGTATTGAG 469098 Query 475916 ACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAA 475975 || | ||| || || ||||| || | || |||||| || ||||||| ||| || Sbjct 469097 ACTGCTGGTGGTATCATGACCAAGTTGATCCCCAGAAACTCTACTATCCCTACCAAGAAG 469038 Query 475976 TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAA 476035 || | || || ||||| |||| || || | ||| ||||| | ||||| Sbjct 469037 TCTGAGACTTTCTCTACTTACGCTGACAACCAGCCTGGTGTTCTTATCCAGGTATTTGAG 468978 Query 476036 GGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATT 476095 ||||| | || || || || ||| ||||| | || | | || ||| Sbjct 468977 GGTGAGCGTGCCAAGACCAAGGACAACAACTTGCTTGGTAAGTTCGAGTTGTCTGGCATT 468918 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 ||||||||||| | || ||||| || ||||| ||||||||||| |||||||| |||||| Sbjct 468917 CCTCCTGCTCCTCGTGGTGTTCCCCAGATTGAGGTTACTTTTGACATTGATGCCAATGGT 468858 Query 476156 ATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACA 476215 |||||||| || |||||| || || || | |||| | |||| || || || || Sbjct 468857 ATTCTTAACGTCTCTGCTTTGGAGAAGGGTACTGGTAAGACTCAAAAGATTACCATCACC 468798 Query 476216 AACAATCGTGGTAGATT 476232 ||| | |||||||| Sbjct 468797 AACGACAAGGGTAGATT 468781 Score = 132 bits (146), Expect = 3e-25 Identities = 371/555 (67%), Gaps = 26/555 (5%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGT--AGCTGTTTGGCAAAATGGTAAAGTAG 474392 || ||||||||||| || |||||| |||||| || |||| | || | | ||| | Sbjct 470291 GGAATTGATTTAGGTACAACTTACTCTTGTGTTGCGCACTTTGCC--AACGACAGAGTTG 470234 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || |||||||| ||||| ||||| ||||| || || || | ||| ||| || || | Sbjct 470233 AGATTATTGCCAACGACCAGGGTAACAGAACTACTCCCTCGTTCGTTGGTTTCACAGACA 470174 Query 474453 CTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| | || | ||||| || || || || | || || || || |||| ||| ||| Sbjct 470173 CTGAGAGAT-TGATTGGTGACGCCGCCAAGAACCAGGCCGCCATGAACCCTGCTAACACT 470115 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA- 474570 | ||||| || || | ||||||||| | || || |||| ||||| ||||| Sbjct 470114 GTCTTTGACGCCAAGCGTTTGATTGGTAGAAAATTCAGTGATGAGGAGGTCCAGTCTGAC 470055 Query 474571 --TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAG 474626 || | || | || || ||||| | | |||||||| || | || || Sbjct 470054 GCTAAG---CACTTCCCCTTCAAGGTTGTCGACAAGGGTGGTAAGCCCAACATCCAGGTT 469998 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGTTTT 474684 | |||| | ||||| || || |||||| || ||| |||| ||||| ||| | || Sbjct 469997 GAGTACAAG--GGTGAGACCAA--GGTTTTCACTCCCGAAGAAATCTCTTCCATGATCTT 469942 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGG--ACAAGAAGTAACTGATGCAGT 474741 | || ||||| | ||||| ||| || ||||| |||| || | ||||| || Sbjct 469941 GGGTAAGATGAAGGAGACCGCTGAG-GGATTCCTTGGCTGCAAG--GTTAACGATGCCGT 469885 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 | || || || || || ||||| || |||||| | ||||| || || ||||| || Sbjct 469884 CGTCACCGTCCCTGCTTACTTTAACGACTCTCAAAGACAAGCCACCAAGGATGCTGGTTT 469825 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| || | || ||| | | |||||||| || || || || ||||| ||||||| Sbjct 469824 GATTGCTGGCTTGAACGTTATGAGAATTATTAACGAGCCCACTGCCGCCGCCATTGCTTA 469765 Query 474862 TGGTCTTGATAAGAA 474876 ||| | || ||||| Sbjct 469764 CGGTTTGGACAAGAA 469750 >seq4 Length=1642203 Score = 154 bits (170), Expect = 1e-31 Identities = 373/554 (67%), Gaps = 18/554 (3%) Strand=Plus/Plus Query 474331 AATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGT 474390 ||||||||||||||| || || |||||| ||||| | ||| | ||||||||| || Sbjct 896727 AATTGGTATTGATTTGGGTACCACTTACTCATGTGTTGGTGTGATGAAAAATGGTAGGGT 896786 Query 474391 AGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGA 474450 ||||| ||| ||||||| || ||||| |||| || ||||| ||||| | ||||| || Sbjct 896787 TGAAATTATTCCCAATGAACAGGGTAACAGAATTACTCCATCGTATGTGGCATTTACCGA 896846 Query 474451 AACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 | |||| | | | || ||||| || || | |||||| | || | | || || Sbjct 896847 CAAGGAACGTTTAGTCGGTGATGCCGCCAAGAACCAAGCTTCTATGAACCACGAGAACAC 896906 Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTC---CAATC 474567 || |||||| |||| ||||| ||||| || ||| ||| | ||||| ||| Sbjct 896907 CATCTTTGATTCTAAGAGATTAATTGGATCAAAGTTTAGTGA---CTCTGTCGTACAAAA 896963 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 || || |||| ||| | || || | || | ||| ||||| | || | Sbjct 896964 GGAGATTAAGCATTTGCCATACAAAGTCTTGAAAAAGGATGGCAAACCCGTCACTGAGGT 897023 Query 474627 CA-ATACACGCAGGTGAAACTAAACAATTTTCAC--CGGAACAAATTTCTTCAATGGTTT 474683 || |||| | ||||| | | | | |||||| ||| |||||||| | ||| ||| Sbjct 897024 CACCTACATG--GGTGAGA--AGAAGACTTTCACTATGGAGGAAATTTCTGCCATGATTT 897079 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGT 474741 | ||||||| | || || || ||||| |||||| || ||| | || || Sbjct 897080 TGAGTGAAATGAAGAGTATTGCTCAG--AATTACTTGGGCAAGAATGTTACTCACGCCGT 897137 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 | |||||||| || ||||| |||||| ||||| | |||||||| || || || || | Sbjct 897138 GGTCACTGTTCCTGCGTATTTCAATGATGCTCAAAGACAAGCAACCAAGGACGCCGGTAC 897197 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 |||||| || | ||||| || | ||| ||||||| || || ||||| ||| |||| || Sbjct 897198 AATTGCTGGGTTGAATGTGTTGAGAATTGTTAATGAGCCCACTGCAGCTGCAATTGCCTA 897257 Query 474862 TGGTCTTGATAAGA 474875 || | || |||| Sbjct 897258 CGGATTAGACAAGA 897271 Score = 136 bits (150), Expect = 3e-26 Identities = 425/647 (66%), Gaps = 27/647 (4%) Strand=Plus/Plus Query 475644 TTGAACCC-GTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAA 475702 ||||| || |||||||| ||| | | ||| | || | | || || || | |||| Sbjct 897646 TTGAAGCCTGTTGAACAGGTTTTGAAGGATGCCAACATGAAGAAGTCTGAAATTGATGAC 897705 Query 475703 ATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAAT--AAGAGAAATGCTTTCATCAT 475760 ||||| ||||| || ||||| || ||||| || || | ||||| || | | | Sbjct 897706 ATTGTACTTGTGGGTGGTTCCACCAGAATCCCCAAGGTTCAAGAGTTAT---TGGAGAAG 897762 Query 475761 ATTTTA-ATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATG 475817 |||| | || || ||| | ||| ||| || |||||||| || || || |||| Sbjct 897763 TTTTTCGACGGAAAGAAGGCT--TCCAAGGGTATCAACCCTGATGAGGCAGTGGCTTATG 897820 Query 475818 GAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTG 475877 | |||||||| ||||| | | |||| | ||| || | | | || |||||| Sbjct 897821 GTGCTGCTGTTCAAGCTGGTGTTTTGGCTGGTGAAGCGGGTGTTGAAG------ATATTG 897874 Query 475878 TACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTA 475937 || | | || || | || | | | ||| ||||||| ||| || | ||||||| Sbjct 897875 TATTATTGGATGTCAACCCCTTGACCCTTGGTATTGAAACCACTGGTGGTGTCATGACTA 897934 Query 475938 ATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATT 475997 | ||| ||||||| ||| |||| || ||| ||||| | | || || ||| | Sbjct 897935 CCTTGATTAACAGAAACACTGCTATTCCTACCAAGAAATCCCAGATTTTCTCTACTGCTG 897994 Query 475998 CTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAG 476057 ||||||| || | || ||| || ||| | | |||||||||| | ||| || | Sbjct 897995 CTGATAACCAGCCCACAGTATTGATTCAAGTTTATGAAGGTGAACGTGCATTGGTCAAGG 898054 Query 476058 ATAATAACAAACTTGGAACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTT 476116 | || |||| | | || | ||| | |||| || |||||||||||||| | || ||| Sbjct 898055 ACAACAACAGATTGGGTAAGTTTGAG-TTGACTGGCATTCCTCCTGCTCCTCGTGGTGTT 898113 Query 476117 CCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGT 476176 ||||||||||| ||||| ||| | ||||| |||||||||||||| ||| || Sbjct 898114 CCTCAAATTGAGGTTACCTTTTCCTTAGATGCCAATGGTATTCTTAAGGTTGAAGCCATG 898173 Query 476177 GATAA---ATCTAGTAA-CAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATT 476232 ||||| || |||| ||||| ||| || || ||||| | |||||||| Sbjct 898174 GATAAGGGTACTGGTAAGTCAGAGT----CTATTACCATCACAAATGACAAGGGTAGATT 898229 Query 476233 TACTGAAGAACAAATTCAACGTATGGTTGATGAAGCCAAAGAGTTTG 476279 || | || ||||| | ||||||||||| ||||| | |||||| Sbjct 898230 AACCAAGGATGAAATTGACCGTATGGTTGAGGAAGCTGAGAAGTTTG 898276 Score = 95.1 bits (104), Expect = 8e-14 Identities = 150/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 318639 ATTAATACCATTATCACCATAAACACATTGAATCAATTTATC--ATTAGCATTTCTTACA 318696 || |||||||| |||||||| ||| ||||||| | | | | || || |||||| Sbjct 1591837 ATCAATACCATCTTCACCATAGACAAATTGAATGACATCACCCAATGAG--TTTCTTGTG 1591780 Query 318697 GTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAA 318756 ||||| || || | || |||||||||||| || ||||| | ||| | |||| Sbjct 1591779 GTACCGTCGTAGTGAACCATAATATCTTCTAAAGCCTTGACTAAACGACGTTGAATATAA 1591720 Query 318757 CCTGTGTCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGG 318816 || || || || ||||| | ||| |||| ||| | ||||||||| || |||||| | || Sbjct 1591719 CCAGTTTCAGCGGTTTTCACAGCTGTATCAATTAAACCTTCTCTACCAGCCATAGCGTGA 1591660 Query 318817 AAAAAGAATTCAGCAGGTCCTAAACCT-TTAA 318847 || || ||||| ||| ||||||| |||| Sbjct 1591659 AAGAAAAATTCTTGTGGTGTTAAACCTCTTAA 1591628 >seq1 Length=2974285 Score = 120 bits (132), Expect = 2e-21 Identities = 227/329 (69%), Gaps = 10/329 (3%) Strand=Plus/Plus Query 356260 AAATTCATTATTAATCCTTTAATATGATATCCATCAACGTCTTGATCTGCTAAAATCATA 356319 ||||| || || || ||||||||||| | ||||| |||||||||| | ||||||| Sbjct 1617638 AAATTTATGATCAAGCCTTTAATATGGGAACCATCTTGATCTTGATCTGTCATAATCATA 1617697 Query 356320 ATACTACCATACCT-AAGTTCTTTAAGAT--CATTA---TATACTTTTCCTTGCTCTAAA 356373 || |||||| || ||| | || | | | | | | || || || || | |||| Sbjct 1617698 ATGTGACCATATCTTAAGCTTTTGATGTTTTCCTGAGAGTAAACCTTCTTGTGTTGTAAA 1617757 Query 356374 CCAACAAttttttttATAGCAGTTATTTCTTCATTACTTGCGACAATTG--CTGGACTTT 356431 |||| ||||| |||| ||| | ||||| |||| ||| || ||| ||| ||| Sbjct 1617758 CCAATAATTTGCTTTAATGCATTAATTTCGGCATTTTTTGAAAC--TTGATCTGCACTGG 1617815 Query 356432 TGGTTCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGA 356491 ||| ||||| ||| || ||| |||| || ||| |||||||||||||| || | Sbjct 1617816 CTTCTCTGACATTGAGTAACTTACCTCTTAAAGGAAAACAGCCATAATAATCTCTACCTA 1617875 Query 356492 CAACATTTAATCCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAG 356551 |||| || || | | ||| |||| | || |||||||| || || | ||| | || Sbjct 1617876 TAACAGCCAACCCTGCAACAGCCAATGATAACGCAGAATCTCCCTCTGTTAAAATAAGAG 1617935 Query 356552 TACATTTATATCCTTCTTTTGTTCCAGCT 356580 ||||||||| ||| |||||||| || ||| Sbjct 1617936 TACATTTATCTCCATCTTTTGTACCTGCT 1617964 Score = 118 bits (130), Expect = 7e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 480563 TACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTC 480622 |||||||||||||||| || || || ||| || || | || |||||| |||||| Sbjct 1360836 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1360895 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||| ||||| ||||| | | || || || || ||||| || |||||||| || Sbjct 1360896 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360955 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| ||||| |||||||| |||| | | | ||||||||||||||||| Sbjct 1360956 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAGGATTCAACCTCAAGGGTAATAGTTTT 1361015 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||||| || || ||||| Sbjct 1361016 TCCAGTCAAGGTCTTGACAAAGATTTG 1361042 Score = 118 bits (130), Expect = 7e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 480563 TACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTC 480622 |||||||||||||||| || || || ||| || || | || |||||| |||||| Sbjct 1361064 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361123 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||| ||||| ||||| | | || || || || ||||| || |||||||| || Sbjct 1361124 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361183 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| ||||| |||||||| |||| | | | ||||||||||||||||| Sbjct 1361184 AATCTTGGACTTGACRTTGTCAATAGTGTCAGAGGATTCAACCTCAAGGGTAATAGTTTT 1361243 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||||| || || ||||| Sbjct 1361244 TCCAGTCAAGGTCTTGACAAAGATTTG 1361270 Score = 116 bits (128), Expect = 2e-20 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 480563 TACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTC 480622 |||||||||||||||| || || || ||| || || | || |||||| |||||| Sbjct 1361292 TACAAGATGAAGTGTAGACTCCTTCTGAATATTGTAGTCTGATAACGTTCTGCCATCTTC 1361351 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||| ||||| ||||| | | || || || || ||||| || |||||||| || Sbjct 1361352 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1361411 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| ||||| |||||||| |||| | | | ||||||||||||||||| Sbjct 1361412 AATCTTGGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACCTCAAGGGTAATAGTTTT 1361471 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||||| || || ||||| Sbjct 1361472 TCCAGTCAAGGTCTTTACAAAGATTTG 1361498 Score = 107 bits (118), Expect = 1e-17 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 480563 TACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTC 480622 |||||||||||| ||| || || || ||| || || | || ||||| |||||| Sbjct 1360608 TACAAGATGAAGCGTAGACTCCTTTTGAATATTGTAGTCTGATAACGTTCTTCCATCTTC 1360667 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||| ||||| ||||| | | || || || || ||||| || |||||||| || Sbjct 1360668 TAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 1360727 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| ||||| |||||||| |||| | | | ||||||||||||||||| Sbjct 1360728 AATCTTGGACTTGACKTTGTCAATAGTGTCAGAGGATTCAACCTCAAGGGTAATAGTTTT 1360787 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||||| || || ||||| Sbjct 1360788 TCCAGTCAAGGTCTTGACAAAGATTTG 1360814 Score = 86.0 bits (94), Expect = 4e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 |||||||||||||| |||| || |||||||||||||| || || || || |||||| | Sbjct 1014627 GGTATTCCTCCTGCCCCCAAGGGTGTTCCTCAAATTGAGGTCACCTTCGACATTGATACC 1014568 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 ||||||| |||| || ||||| |||| || || ||||||| Sbjct 1014567 GATGGTATCATTAAGGTCTCTGCTCGTGACAAGGCTTCTAACAAG 1014523 Score = 86.0 bits (94), Expect = 4e-11 Identities = 235/355 (66%), Gaps = 15/355 (4%) Strand=Plus/Plus Query 355370 TGAAAATATATTTAGTTAATTG-ATTGAGTTGTGTGAAGATATATCGTGCACTTGCATTA 355428 ||||||| | | | || ||||| | | | || ||| || || |||| ||| |||| | Sbjct 1616868 TGAAAATCTTTCTGGT-AATTGCAGTAATTTCTGTAAAAATGTATCTTGC---TGCAGAA 1616923 Query 355429 ---TCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTATG 355485 ||||| ||||| ||| ||||| || |||||| || ||| | |||||| Sbjct 1616924 AAGTCTTTTCCTCCTGCAGCTCTAGTACCGAAAGCACCATTTGGTTTTAAGATATTTATA 1616983 Query 355486 TTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTTCT 355545 ||||| ||||| | ||||||| |||| | || || || | ||| || ||||| Sbjct 1616984 TTGTTTGATCCAATAAAATTTTGGGCCAATCCAATAATTGTAGTAATCAAAGATTGTTCA 1617043 Query 355546 CCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATTTCT 355605 ||||||||||| | | | || || || ||| ||| | || ||||||||||| Sbjct 1617044 CCATGATGATAATGGGCTTGTTCAGATACATAACCAACTAACTGAGCAACTTTAATTTCA 1617103 Query 355606 TCTTTATAAATACCTTCTTCCT--CTGAACCATACAATACTTTTCTTTGAGATGGTTTAA 355663 | |||| | || ||| | ||||| ||||||| || | ||| ||||||| Sbjct 1617104 TTTTTA-----AGGTTTTTCTTGAAACAACCAAACAATACCTTACGTTGTCCAGGTTTAA 1617158 Query 355664 GACCGTCAGCTATGTTAGGTATTGATCTCATATTATCATCGACTGAAAATGAAAT 355718 | || || || | || |||||||| |||||||| | | ||||||| |||| Sbjct 1617159 GCCCATCCAATACGGAGGGAATTGATCTGATATTATCTGCCATTGAAAATAAAAT 1617213 >seq7 Length=860703 Score = 100 bits (110), Expect = 2e-15 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| ||||| | | || || | |||||| ||||||||||| | | ||| Sbjct 37811 TTGTAGTCAGAAAGAGTACGGCCGTCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGC 37752 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| ||||| ||||||||||| |||||||| |||||| ||||| || || Sbjct 37751 TGGTCAGGGGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCG 37692 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | |||||||| ||||| |||||||| | ||||| ||||||||||| Sbjct 37691 GAAGACTCCA-CCTCAAGGGTGATAGTCTTACCGGTTAAGGTCTTGACGAAAATTTG 37636 >seq5 Length=1501106 Score = 100 bits (110), Expect = 2e-15 Identities = 145/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 591521 TAATACATTCCCGTTTTAAGTCCTTTGCGATATGCATAAAATAGACATGAATTTAATTTG 591580 || ||||| || ||||| | ||||| |||||||||| | || ||||||| Sbjct 763011 TAGTACATGCCTGTTTTCAACCCTTTCTCCCATGCATAAAAGTGGCAACTGGTTAATTTA 762952 Query 591581 ACAAAATCTGG--TTTCTCAATAAATATATTCATACTTTGTGTTTGATCTATAAATGGAG 591638 ||||| ||| ||| | ||||||||| ||||||| || ||| || ||||| Sbjct 762951 CCAAAAGTTGGGTTTTGTAAATAAATAT--TCATACTCTGCAGTTGGTCAATAAACTTCC 762894 Query 591639 CTCGATCAGCTGCCATATCAATGATAGATTGTTGTGGAATTTCCCAAACTGTTCTATAAA 591698 ||| ||||| |||||||| || || || ||| |||||||||||||| ||| |||| | Sbjct 762893 CTCTGTCAGCAGCCATATCTATTATGACTTTTTGGGGAATTTCCCAAACAGTTTTATACA 762834 Query 591699 TATTTTTAATATTTTGTGGTATA 591721 |||||| ||| | ||||| ||| Sbjct 762833 AATTTTTGATACTCTGTGGAATA 762811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178342102960