Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 199 2e-46 seq1 199 2e-46 >seq5 Length=1501106 Score = 199 bits (220), Expect = 2e-46 Identities = 321/456 (70%), Gaps = 9/456 (2%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 |||||||| |||| ||| ||| |||||||| | ||||| | | |||||||||||||||| Sbjct 761821 ATTTTGCTTAACTCTCTTCATGAATAAATCGGATATCCATAGTCCATAAAATAAATCTCT 761762 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 | || |||||||| ||| |||||||| || |||| || | | ||| || ||||| | Sbjct 761761 GGTTCGCATTTCTTGTTTGCCGTGATTTTTCTTTAAATTGAGTACATCGAATATATCACA 761702 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 |||||||| || | || | |||||| |||| ||| | || |||||||| || Sbjct 761701 ATGCCATGGCTCAATGTATACTGCAAAAGCACCTGGTCTCCGACTACCTCCTTGATCAAC 761642 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTT 26154 |||||||||||||||||||| ||| |||||| |||| || ||||||||| ||| || Sbjct 761641 ATATCTTGCAGTTTCATTGAATACTCGCAACATGGGAATTATTCCAGTTGATGTTCCATT 761582 Query 26155 TGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC 26214 || |||| || | |||||| | | || || ||| ||| | || |||||||| Sbjct 761581 TGAGCTAGCGATGTAGGATCCATTACCCCGAACATTATGAATATGTAAGCCTATTCCACC 761522 Query 26215 AGCCCATTTTGAAATAGCTGCA-CAATCTGAAACTGTATCGAAAATTCCTTTTATGCTAT 26273 || | ||| |||||| ||| | || || || | | | ||||| | || || Sbjct 761521 AGATCCTTTAGAAATAAGAGCAGTCTTGTGCAA-AGTTTTGTATATTCCGTCAATAGAAT 761463 Query 26274 CACCTTTCATTCCTAATAAAAAACAAGAAGA---TAATTGCGAATGAGTTGTTCCTGAAT 26330 || ||| |||| | || | ||| |||||||| || | ||| | ||||||| | Sbjct 761462 CATCTTCCATTGCCAAAAGAAAGCAAGAAGAAAGAAAATTAAAATCA---GTTCCTGCGT 761406 Query 26331 TAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366 || | | || |||| ||||||| || |||| |||| Sbjct 761405 TATAGAGAGTGGGTGAAGCATGAATAAAATA-CCTT 761371 >seq1 Length=2974285 Score = 199 bits (220), Expect = 2e-46 Identities = 320/457 (70%), Gaps = 2/457 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| ||| |||| || ||| |||||||| ||||||||| ||| |||||| || || || Sbjct 199691 ATTAGGAGAGAACAAGGTCCACTCAGCATTCTGCTCAACTCTCTTCATAAACAAGTCAGG 199632 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| ||| || |||||||| || ||||||||||| || || ||||||||| | Sbjct 199631 AATCCACAATGCTGGGAACAAATCTCTTGCCCTCATTTCTTCCTTACCATGATTCTTTCT 199572 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | ||||||||| ||||| | |||||||||||| ||||| | ||||| ||| Sbjct 199571 AATATCGATGAAATCAAAGATATCCGCGTGCCATGGTTCCAAATATAAGGCAAATGCACC 199512 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 ||| || ||||| ||||| ||||| | ||||| | |||||||||| | | ||| Sbjct 199511 GGGTCTCTTATTACCACCCTGATCCACGTAACGAGCAGTGTTATTGAAAACTCTAACCAT 199452 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| | ||| | || ||||| || | | ||| | || || ||||| | ||| Sbjct 199451 AGGAATGATACCATTAGAGGTACCGTTGGTACCAGCAATGTAGGCACCAGTCGAGCGAAT 199392 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246 | ||| || | ||| || || ||||| | || ||||| ||||| ||| || Sbjct 199391 GTTGTGTATGTGTAAACCAATACCTCCAGCACTCTTGGAAATCAAGGCACATGTCTTCAA 199332 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306 ||||| |||| || | || |||| ||||||| | | ||||| || || || | Sbjct 199331 -GGTATCATAAATACCGTCAATAGAATCATCTTTCATAGCAATCAAAAAGCACGAGGACA 199273 Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGG 26343 ||| | | | ||| || | |||||| || || || Sbjct 199272 TTTGAGGGTTGGGTGTACCAGCATTAAACAAAGTAGG 199236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039938321500